RNA–Protein interactions for RNA: ENST00000569464.5

CBFA2T3-210, Transcript of CBFA2/RUNX1 translocation partner 3, humanhuman

TSL 1 (best)

Gene CBFA2T3, Length 1,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBFA2T3-210ENST00000569464 NISCHQ9Y2I1 1504 aa33.76■■■□□ 2.99
CBFA2T3-210ENST00000569464 CCDC180Q9P1Z9 1646 aa30.03■■■□□ 2.4
CBFA2T3-210ENST00000569464 ABCC9O60706 1549 aa29.57■■■□□ 2.32
CBFA2T3-210ENST00000569464 RB1CC1Q8TDY2 1594 aa28.35■■■□□ 2.13
CBFA2T3-210ENST00000569464 DCAF8L2P0C7V8 631 aa28.33■■■□□ 2.13
CBFA2T3-210ENST00000569464 NACADO15069 1562 aa28.28■■■□□ 2.12
CBFA2T3-210ENST00000569464 ZCCHC6Q5VYS8 1495 aaKnown RBP28.09■■■□□ 2.09
CBFA2T3-210ENST00000569464 MYO15BQ96JP2 1530 aa28.05■■■□□ 2.08
CBFA2T3-210ENST00000569464 DCAF1Q9Y4B6 1507 aa27.9■■■□□ 2.06
CBFA2T3-210ENST00000569464 UNC13AQ9UPW8 1703 aa27.7■■■□□ 2.03
CBFA2T3-210ENST00000569464 DNAJC5BQ9UF47 199 aa27.67■■■□□ 2.02
CBFA2T3-210ENST00000569464 PABPN1Q86U42 306 aaKnown RBP eCLIP27.64■■■□□ 2.01
CBFA2T3-210ENST00000569464 BICRAQ9NZM4 1560 aa27.51■■□□□ 1.99
CBFA2T3-210ENST00000569464 SCRIBQ14160 1630 aa27.44■■□□□ 1.98
CBFA2T3-210ENST00000569464 SHROOM4Q9ULL8 1493 aa27.17■■□□□ 1.94
CBFA2T3-210ENST00000569464 EIF4G1Q04637 1599 aaKnown RBP26.79■■□□□ 1.88
CBFA2T3-210ENST00000569464 CC2D2AQ9P2K1 1620 aa26.72■■□□□ 1.87
CBFA2T3-210ENST00000569464 CECR2Q9BXF3 1484 aa26.57■■□□□ 1.84
CBFA2T3-210ENST00000569464 SMARCA4P51532 1647 aa26.22■■□□□ 1.79
CBFA2T3-210ENST00000569464 BAZ1AQ9NRL2 1556 aaPredicted RBP26.17■■□□□ 1.78
CBFA2T3-210ENST00000569464 ATAD2BQ9ULI0 1458 aa26.12■■□□□ 1.77
CBFA2T3-210ENST00000569464 NCAPD3P42695 1498 aa26.11■■□□□ 1.77
CBFA2T3-210ENST00000569464 SMARCA2P51531 1590 aa26.06■■□□□ 1.76
CBFA2T3-210ENST00000569464 MROH2BQ7Z745 1585 aa26.03■■□□□ 1.76
CBFA2T3-210ENST00000569464 HMGXB3Q12766 1538 aa25.96■■□□□ 1.75
CBFA2T3-210ENST00000569464 PEG3Q9GZU2 1588 aa25.94■■□□□ 1.74
CBFA2T3-210ENST00000569464 BAZ1BQ9UIG0 1483 aaKnown RBP25.89■■□□□ 1.74
CBFA2T3-210ENST00000569464 WIZO95785 1651 aa25.75■■□□□ 1.71
CBFA2T3-210ENST00000569464 RSF1Q96T23 1441 aaPredicted RBP25.69■■□□□ 1.7
CBFA2T3-210ENST00000569464 NESP48681 1621 aa25.56■■□□□ 1.68
CBFA2T3-210ENST00000569464 DNAJC5Q9H3Z4 198 aa25.52■■□□□ 1.68
CBFA2T3-210ENST00000569464 ERCC6Q03468 1493 aa25.49■■□□□ 1.67
CBFA2T3-210ENST00000569464 TOP2AP11388 1531 aaKnown RBP25.45■■□□□ 1.66
CBFA2T3-210ENST00000569464 LAMC3Q9Y6N6 1575 aa25.43■■□□□ 1.66
CBFA2T3-210ENST00000569464 CADPSQ9ULU8 1353 aa25.37■■□□□ 1.65
CBFA2T3-210ENST00000569464 PDS5BQ9NTI5 1447 aa25.29■■□□□ 1.64
CBFA2T3-210ENST00000569464 CUX2O14529 1486 aa25.24■■□□□ 1.63
CBFA2T3-210ENST00000569464 KIF21AQ7Z4S6 1674 aa25.22■■□□□ 1.63
CBFA2T3-210ENST00000569464 CCDC88BA6NC98 1476 aa25.17■■□□□ 1.62
CBFA2T3-210ENST00000569464 CFTRP13569 1480 aa25.17■■□□□ 1.62
CBFA2T3-210ENST00000569464 THOC2Q8NI27 1593 aaKnown RBP25.16■■□□□ 1.62
CBFA2T3-210ENST00000569464 FANCD2Q9BXW9 1451 aa25.07■■□□□ 1.6
CBFA2T3-210ENST00000569464 CEP164Q9UPV0 1460 aa25.04■■□□□ 1.6
CBFA2T3-210ENST00000569464 MRC2Q9UBG0 1479 aa25.03■■□□□ 1.6
CBFA2T3-210ENST00000569464 SUPT5HO00267 1087 aaKnown RBP25■■□□□ 1.59
CBFA2T3-210ENST00000569464 WDR62O43379 1518 aa24.95■■□□□ 1.58
CBFA2T3-210ENST00000569464 PRDM2Q13029 1718 aa24.94■■□□□ 1.58
CBFA2T3-210ENST00000569464 URB2Q14146 1524 aaKnown RBP24.83■■□□□ 1.57
CBFA2T3-210ENST00000569464 TOPBP1Q92547 1522 aa24.65■■□□□ 1.54
CBFA2T3-210ENST00000569464 ABCC8Q09428 1581 aa24.62■■□□□ 1.53
CBFA2T3-210ENST00000569464 DNMBPQ6XZF7 1577 aa24.6■■□□□ 1.53
CBFA2T3-210ENST00000569464 IFT140Q96RY7 1462 aa24.52■■□□□ 1.52
CBFA2T3-210ENST00000569464 TRIM41Q8WV44 630 aa24.48■■□□□ 1.51
CBFA2T3-210ENST00000569464 ZNF608Q9ULD9 1512 aaPredicted RBP24.44■■□□□ 1.5
CBFA2T3-210ENST00000569464 POLA1P09884 1462 aaPredicted RBP24.44■■□□□ 1.5
CBFA2T3-210ENST00000569464 CUX1P39880 1505 aa24.43■■□□□ 1.5
CBFA2T3-210ENST00000569464 TARBP1Q13395 1621 aaKnown RBP24.38■■□□□ 1.49
CBFA2T3-210ENST00000569464 FGD5Q6ZNL6 1462 aa24.36■■□□□ 1.49
CBFA2T3-210ENST00000569464 RAD54L2Q9Y4B4 1467 aa24.35■■□□□ 1.49
CBFA2T3-210ENST00000569464 SOGA1O94964 1423 aa24.34■■□□□ 1.49
CBFA2T3-210ENST00000569464 EIF4G3O43432 1585 aaKnown RBP24.31■■□□□ 1.48
CBFA2T3-210ENST00000569464 AQRO60306 1485 aaKnown RBP eCLIP24.3■■□□□ 1.481e-9■■■■■ 51
CBFA2T3-210ENST00000569464 TDRD9Q8NDG6 1382 aaKnown RBP24.23■■□□□ 1.47
CBFA2T3-210ENST00000569464 WRNQ14191 1432 aaPredicted RBP eCLIP24.23■■□□□ 1.474e-6■■■■■ 37.6
CBFA2T3-210ENST00000569464 OSCARQ8IYS5 282 aa24.2■■□□□ 1.46
CBFA2T3-210ENST00000569464 SYNJ1O43426 1573 aa24.17■■□□□ 1.46
CBFA2T3-210ENST00000569464 TOP2BQ02880 1626 aa24.17■■□□□ 1.46
CBFA2T3-210ENST00000569464 WDR97A6NE52 1622 aa24.15■■□□□ 1.46
CBFA2T3-210ENST00000569464 BIVM-ERCC5R4GMW8 1640 aa24.15■■□□□ 1.46
CBFA2T3-210ENST00000569464 ABCA10Q8WWZ4 1543 aa24.11■■□□□ 1.45
CBFA2T3-210ENST00000569464 GRIN2BQ13224 1484 aa24.06■■□□□ 1.44
CBFA2T3-210ENST00000569464 FBLN2P98095 1184 aa24.06■■□□□ 1.44
CBFA2T3-210ENST00000569464 GAPVD1Q14C86 1478 aa24.06■■□□□ 1.44
CBFA2T3-210ENST00000569464 SNAPC4Q5SXM2 1469 aa24.06■■□□□ 1.44
CBFA2T3-210ENST00000569464 CHD1O14646 1710 aa24.03■■□□□ 1.44
CBFA2T3-210ENST00000569464 ABCA5Q8WWZ7 1642 aa24.02■■□□□ 1.44
CBFA2T3-210ENST00000569464 MAGI1Q96QZ7 1491 aaPredicted RBP24■■□□□ 1.43
CBFA2T3-210ENST00000569464 PBRM1Q86U86 1689 aa23.99■■□□□ 1.43
CBFA2T3-210ENST00000569464 CHMP7Q8WUX9 453 aaPredicted RBP23.95■■□□□ 1.42
CBFA2T3-210ENST00000569464 SYNJ2O15056 1496 aa23.91■■□□□ 1.42
CBFA2T3-210ENST00000569464 ERICH3Q5RHP9 1530 aa23.81■■□□□ 1.4
CBFA2T3-210ENST00000569464 ADAMTS12P58397 1594 aa23.81■■□□□ 1.4
CBFA2T3-210ENST00000569464 RIMBP3CA6NJZ7 1639 aa23.81■■□□□ 1.4
CBFA2T3-210ENST00000569464 RIMBP3BA6NNM3 1639 aa23.81■■□□□ 1.4
CBFA2T3-210ENST00000569464 RIMBP3Q9UFD9 1639 aa23.81■■□□□ 1.4
CBFA2T3-210ENST00000569464 ARHGEF11O15085 1522 aa23.8■■□□□ 1.4
CBFA2T3-210ENST00000569464 CLASP1Q7Z460 1538 aa23.77■■□□□ 1.4
CBFA2T3-210ENST00000569464 FHAD1B1AJZ9 1412 aa23.76■■□□□ 1.39
CBFA2T3-210ENST00000569464 GRIN2AQ12879 1464 aa23.75■■□□□ 1.39
CBFA2T3-210ENST00000569464 KIF27Q86VH2 1401 aa23.73■■□□□ 1.39
CBFA2T3-210ENST00000569464 IGF1RP08069 1367 aa23.65■■□□□ 1.38
CBFA2T3-210ENST00000569464 NUP160Q12769 1436 aa23.64■■□□□ 1.38
CBFA2T3-210ENST00000569464 CEP170Q5SW79 1584 aa23.64■■□□□ 1.38
CBFA2T3-210ENST00000569464 CYB5RLQ6IPT4 315 aa23.61■■□□□ 1.37
CBFA2T3-210ENST00000569464 ARAP1Q96P48 1450 aa23.61■■□□□ 1.37
CBFA2T3-210ENST00000569464 CUL7Q14999 1698 aa23.56■■□□□ 1.36
CBFA2T3-210ENST00000569464 CARMIL1Q5VZK9 1371 aa23.51■■□□□ 1.35
CBFA2T3-210ENST00000569464 RUSC2Q8N2Y8 1516 aa23.51■■□□□ 1.35
CBFA2T3-210ENST00000569464 SHROOM2Q13796 1616 aa23.47■■□□□ 1.35
CBFA2T3-210ENST00000569464 ERCC6L2Q5T890 1561 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms