RNA–Protein interactions for RNA: ENST00000355951.2

TCAF1-201, Transcript of TRPM8 channel associated factor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TCAF1, Length 3,343 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCAF1-201ENST00000355951 NISCHQ9Y2I1 1504 aa19.81■□□□□ 0.76
TCAF1-201ENST00000355951 CCDC180Q9P1Z9 1646 aa17.74■□□□□ 0.43
TCAF1-201ENST00000355951 ABCC9O60706 1549 aa16.68■□□□□ 0.26
TCAF1-201ENST00000355951 MYO15BQ96JP2 1530 aa16.64■□□□□ 0.25
TCAF1-201ENST00000355951 DCAF1Q9Y4B6 1507 aa16.61■□□□□ 0.25
TCAF1-201ENST00000355951 ZCCHC6Q5VYS8 1495 aaKnown RBP16.6■□□□□ 0.25
TCAF1-201ENST00000355951 NACADO15069 1562 aa16.5■□□□□ 0.23
TCAF1-201ENST00000355951 RB1CC1Q8TDY2 1594 aa16.41■□□□□ 0.22
TCAF1-201ENST00000355951 UNC13AQ9UPW8 1703 aa16.16■□□□□ 0.18
TCAF1-201ENST00000355951 SHROOM4Q9ULL8 1493 aa15.99■□□□□ 0.15
TCAF1-201ENST00000355951 BICRAQ9NZM4 1560 aa15.96■□□□□ 0.15
TCAF1-201ENST00000355951 DCAF8L2P0C7V8 631 aa15.92■□□□□ 0.14
TCAF1-201ENST00000355951 SCRIBQ14160 1630 aa15.87■□□□□ 0.13
TCAF1-201ENST00000355951 PELP1Q8IZL8 1130 aaKnown RBP15.79■□□□□ 0.12
TCAF1-201ENST00000355951 MYT1Q01538 1121 aa15.65■□□□□ 0.1
TCAF1-201ENST00000355951 SLC24A1O60721 1099 aa15.5■□□□□ 0.07
TCAF1-201ENST00000355951 PABPN1Q86U42 306 aaKnown RBP eCLIP15.45■□□□□ 0.06
TCAF1-201ENST00000355951 EIF4G1Q04637 1599 aaKnown RBP15.44■□□□□ 0.06
TCAF1-201ENST00000355951 PEG3Q9GZU2 1588 aa15.36■□□□□ 0.05
TCAF1-201ENST00000355951 SMARCA4P51532 1647 aa15.36■□□□□ 0.05
TCAF1-201ENST00000355951 BAZ1AQ9NRL2 1556 aaPredicted RBP15.34■□□□□ 0.05
TCAF1-201ENST00000355951 PRKCSHP14314 528 aaPredicted RBP15.34■□□□□ 0.05
TCAF1-201ENST00000355951 CC2D2AQ9P2K1 1620 aa15.3■□□□□ 0.04
TCAF1-201ENST00000355951 CECR2Q9BXF3 1484 aa15.27■□□□□ 0.03
TCAF1-201ENST00000355951 HMGXB3Q12766 1538 aa15.2■□□□□ 0.02
TCAF1-201ENST00000355951 SMARCA2P51531 1590 aa15.2■□□□□ 0.02
TCAF1-201ENST00000355951 MROH2BQ7Z745 1585 aa15.2■□□□□ 0.02
TCAF1-201ENST00000355951 NCAPD3P42695 1498 aa15.17■□□□□ 0.02
TCAF1-201ENST00000355951 ATAD2BQ9ULI0 1458 aa15.14■□□□□ 0.01
TCAF1-201ENST00000355951 HRCP23327 699 aa15.12■□□□□ 0.01
TCAF1-201ENST00000355951 SUPT5HO00267 1087 aaKnown RBP15.11■□□□□ 0.01
TCAF1-201ENST00000355951 DNAJC5BQ9UF47 199 aa15.09■□□□□ 0.01
TCAF1-201ENST00000355951 TTBK1Q5TCY1 1321 aaPredicted RBP15.08■□□□□ 0
TCAF1-201ENST00000355951 RSF1Q96T23 1441 aaPredicted RBP15.08■□□□□ 0
TCAF1-201ENST00000355951 WIZO95785 1651 aa15.05■□□□□ 0
TCAF1-201ENST00000355951 TOP2AP11388 1531 aaKnown RBP15□□□□□ -0.01
TCAF1-201ENST00000355951 BAZ1BQ9UIG0 1483 aaKnown RBP14.96□□□□□ -0.01
TCAF1-201ENST00000355951 CHIC1Q5VXU3 224 aa14.91□□□□□ -0.02
TCAF1-201ENST00000355951 ERICH6Q7L0X2 663 aa14.89□□□□□ -0.03
TCAF1-201ENST00000355951 PRDM2Q13029 1718 aa14.81□□□□□ -0.04
TCAF1-201ENST00000355951 PPARGC1BQ86YN6 1023 aaKnown RBP14.81□□□□□ -0.04
TCAF1-201ENST00000355951 PCGF6Q9BYE7 350 aa14.79□□□□□ -0.04
TCAF1-201ENST00000355951 LAMC3Q9Y6N6 1575 aa14.77□□□□□ -0.04
TCAF1-201ENST00000355951 APLP2Q06481 763 aa14.72□□□□□ -0.05
TCAF1-201ENST00000355951 CCDC88BA6NC98 1476 aa14.7□□□□□ -0.06
TCAF1-201ENST00000355951 CFTRP13569 1480 aa14.67□□□□□ -0.06
TCAF1-201ENST00000355951 EHMT2Q96KQ7 1210 aa14.67□□□□□ -0.06
TCAF1-201ENST00000355951 CADPSQ9ULU8 1353 aa14.61□□□□□ -0.07
TCAF1-201ENST00000355951 BCL11AQ9H165 835 aa14.59□□□□□ -0.07
TCAF1-201ENST00000355951 KIF21AQ7Z4S6 1674 aa14.57□□□□□ -0.08
TCAF1-201ENST00000355951 NESP48681 1621 aa14.55□□□□□ -0.08
TCAF1-201ENST00000355951 THOC2Q8NI27 1593 aaKnown RBP14.55□□□□□ -0.08
TCAF1-201ENST00000355951 PDS5BQ9NTI5 1447 aa14.5□□□□□ -0.09
TCAF1-201ENST00000355951 DAXXQ9UER7 740 aaPredicted RBP14.46□□□□□ -0.09
TCAF1-201ENST00000355951 WDR62O43379 1518 aa14.46□□□□□ -0.09
TCAF1-201ENST00000355951 LOC105371045A0A1W2PR82 267 aa14.44□□□□□ -0.1
TCAF1-201ENST00000355951 FANCD2Q9BXW9 1451 aa14.44□□□□□ -0.1
TCAF1-201ENST00000355951 TRIM26Q12899 539 aaPredicted RBP14.43□□□□□ -0.1
TCAF1-201ENST00000355951 CEP164Q9UPV0 1460 aa14.42□□□□□ -0.1
TCAF1-201ENST00000355951 MRC2Q9UBG0 1479 aa14.41□□□□□ -0.1
TCAF1-201ENST00000355951 CUX2O14529 1486 aa14.4□□□□□ -0.1
TCAF1-201ENST00000355951 ABCC8Q09428 1581 aa14.37□□□□□ -0.11
TCAF1-201ENST00000355951 FAM9AQ8IZU1 332 aaPredicted RBP14.36□□□□□ -0.11
TCAF1-201ENST00000355951 DNMBPQ6XZF7 1577 aa14.36□□□□□ -0.11
TCAF1-201ENST00000355951 BIVM-ERCC5R4GMW8 1640 aa14.36□□□□□ -0.11
TCAF1-201ENST00000355951 URB2Q14146 1524 aaKnown RBP14.34□□□□□ -0.11
TCAF1-201ENST00000355951 ERCC6Q03468 1493 aa14.34□□□□□ -0.11
TCAF1-201ENST00000355951 WDR97A6NE52 1622 aa14.29□□□□□ -0.12
TCAF1-201ENST00000355951 TOPBP1Q92547 1522 aa14.29□□□□□ -0.12
TCAF1-201ENST00000355951 TOP2BQ02880 1626 aa14.28□□□□□ -0.12
TCAF1-201ENST00000355951 CUX1P39880 1505 aa14.27□□□□□ -0.13
TCAF1-201ENST00000355951 ZEB1P37275 1124 aaPredicted RBP14.26□□□□□ -0.13
TCAF1-201ENST00000355951 SCAF1Q9H7N4 1312 aaKnown RBP14.25□□□□□ -0.13
TCAF1-201ENST00000355951 EIF5BO60841 1220 aaKnown RBP14.24□□□□□ -0.13
TCAF1-201ENST00000355951 TARBP1Q13395 1621 aaKnown RBP14.24□□□□□ -0.13
TCAF1-201ENST00000355951 SYNJ1O43426 1573 aa14.21□□□□□ -0.13
TCAF1-201ENST00000355951 IFT140Q96RY7 1462 aa14.17□□□□□ -0.14
TCAF1-201ENST00000355951 POLA1P09884 1462 aaPredicted RBP14.16□□□□□ -0.14
TCAF1-201ENST00000355951 WRNQ14191 1432 aaPredicted RBP eCLIP14.16□□□□□ -0.14
TCAF1-201ENST00000355951 FGD5Q6ZNL6 1462 aa14.12□□□□□ -0.15
TCAF1-201ENST00000355951 ABCA5Q8WWZ7 1642 aa14.11□□□□□ -0.15
TCAF1-201ENST00000355951 ABCA10Q8WWZ4 1543 aa14.11□□□□□ -0.15
TCAF1-201ENST00000355951 PLEKHG5O94827 1062 aa14.1□□□□□ -0.15
TCAF1-201ENST00000355951 EIF4G3O43432 1585 aaKnown RBP14.07□□□□□ -0.16
TCAF1-201ENST00000355951 PBRM1Q86U86 1689 aa14.04□□□□□ -0.16
TCAF1-201ENST00000355951 SOGA1O94964 1423 aa14.01□□□□□ -0.17
TCAF1-201ENST00000355951 RAD54L2Q9Y4B4 1467 aa13.99□□□□□ -0.17
TCAF1-201ENST00000355951 TRIM41Q8WV44 630 aa13.98□□□□□ -0.17
TCAF1-201ENST00000355951 ERICH3Q5RHP9 1530 aa13.97□□□□□ -0.17
TCAF1-201ENST00000355951 ZNF608Q9ULD9 1512 aaPredicted RBP13.97□□□□□ -0.17
TCAF1-201ENST00000355951 MAGI1Q96QZ7 1491 aaPredicted RBP13.92□□□□□ -0.18
TCAF1-201ENST00000355951 CUL7Q14999 1698 aa13.92□□□□□ -0.18
TCAF1-201ENST00000355951 ADAMTS12P58397 1594 aa13.91□□□□□ -0.18
TCAF1-201ENST00000355951 GRIN2BQ13224 1484 aa13.91□□□□□ -0.18
TCAF1-201ENST00000355951 GAPVD1Q14C86 1478 aa13.9□□□□□ -0.18
TCAF1-201ENST00000355951 ACIN1Q9UKV3 1341 aaKnown RBP13.89□□□□□ -0.19
TCAF1-201ENST00000355951 CHD1O14646 1710 aa13.86□□□□□ -0.19
TCAF1-201ENST00000355951 AQRO60306 1485 aaKnown RBP eCLIP13.86□□□□□ -0.19
TCAF1-201ENST00000355951 YTHDC1Q96MU7 727 aaKnown RBP13.84□□□□□ -0.19
TCAF1-201ENST00000355951 KIF27Q86VH2 1401 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms