RNA–Protein interactions for RNA: ENST00000423118.5

PKD1-203, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PKD1, Length 14,135 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-203ENST00000423118 DCAF8L2P0C7V8 631 aa17.09■□□□□ 0.33
PKD1-203ENST00000423118 PELP1Q8IZL8 1130 aaKnown RBP16.71■□□□□ 0.26
PKD1-203ENST00000423118 EHMT2Q96KQ7 1210 aa16.67■□□□□ 0.26
PKD1-203ENST00000423118 ERICH6Q7L0X2 663 aa16.42■□□□□ 0.22
PKD1-203ENST00000423118 MYT1Q01538 1121 aa16.4■□□□□ 0.22
PKD1-203ENST00000423118 NISCHQ9Y2I1 1504 aa16.34■□□□□ 0.21
PKD1-203ENST00000423118 SUPT5HO00267 1087 aaKnown RBP16.26■□□□□ 0.19
PKD1-203ENST00000423118 TTBK1Q5TCY1 1321 aaPredicted RBP16.15■□□□□ 0.18
PKD1-203ENST00000423118 CCER1Q8TC90 406 aaPredicted RBP15.92■□□□□ 0.14
PKD1-203ENST00000423118 YTHDC1Q96MU7 727 aaKnown RBP15.89■□□□□ 0.13
PKD1-203ENST00000423118 SHROOM4Q9ULL8 1493 aa15.84■□□□□ 0.13
PKD1-203ENST00000423118 PCGF6Q9BYE7 350 aa15.83■□□□□ 0.12
PKD1-203ENST00000423118 CENPBP07199 599 aaPredicted RBP15.78■□□□□ 0.12
PKD1-203ENST00000423118 APLP2Q06481 763 aa15.7■□□□□ 0.1
PKD1-203ENST00000423118 NEFLP07196 543 aa15.63■□□□□ 0.09
PKD1-203ENST00000423118 RANGAP1P46060 587 aaPredicted RBP15.63■□□□□ 0.09
PKD1-203ENST00000423118 FAM9AQ8IZU1 332 aaPredicted RBP15.61■□□□□ 0.09
PKD1-203ENST00000423118 DAXXQ9UER7 740 aaPredicted RBP15.45■□□□□ 0.06
PKD1-203ENST00000423118 ATP1B4Q9UN42 357 aaPredicted RBP15.34■□□□□ 0.05
PKD1-203ENST00000423118 CNGB1Q14028 1251 aaPredicted RBP15.29■□□□□ 0.04
PKD1-203ENST00000423118 PPARGC1BQ86YN6 1023 aaKnown RBP15.23■□□□□ 0.03
PKD1-203ENST00000423118 POLR3GLQ9BT43 218 aa15.22■□□□□ 0.03
PKD1-203ENST00000423118 ZEB1P37275 1124 aaPredicted RBP15.15■□□□□ 0.02
PKD1-203ENST00000423118 ZNF316A6NFI3 1004 aaPredicted RBP15.12■□□□□ 0.01
PKD1-203ENST00000423118 RTL5Q5HYW3 569 aaPredicted RBP15.11■□□□□ 0.01
PKD1-203ENST00000423118 CLSPNQ9HAW4 1339 aa14.97□□□□□ -0.01
PKD1-203ENST00000423118 CHIC1Q5VXU3 224 aa14.93□□□□□ -0.02
PKD1-203ENST00000423118 BCANQ96GW7 911 aa14.92□□□□□ -0.02
PKD1-203ENST00000423118 BCL11AQ9H165 835 aa14.91□□□□□ -0.02
PKD1-203ENST00000423118 UBTFP17480 764 aaKnown RBP14.88□□□□□ -0.03
PKD1-203ENST00000423118 SLC4A1APQ9BWU0 796 aaKnown RBP14.87□□□□□ -0.03
PKD1-203ENST00000423118 ITGAEP38570 1179 aa14.85□□□□□ -0.03
PKD1-203ENST00000423118 TRIM41Q8WV44 630 aa14.84□□□□□ -0.03
PKD1-203ENST00000423118 EIF5BO60841 1220 aaKnown RBP14.84□□□□□ -0.03
PKD1-203ENST00000423118 HRCP23327 699 aa14.79□□□□□ -0.04
PKD1-203ENST00000423118 MYT1LQ9UL68 1186 aa14.74□□□□□ -0.05
PKD1-203ENST00000423118 HNRNPUL2Q1KMD3 747 aaKnown RBP14.61□□□□□ -0.07
PKD1-203ENST00000423118 NPM2Q86SE8 214 aaKnown RBP14.56□□□□□ -0.08
PKD1-203ENST00000423118 GTF3C3Q9Y5Q9 886 aa14.55□□□□□ -0.08
PKD1-203ENST00000423118 DIEXFQ68CQ4 756 aaKnown RBP14.5□□□□□ -0.09
PKD1-203ENST00000423118 ARXQ96QS3 562 aa14.5□□□□□ -0.09
PKD1-203ENST00000423118 SLC24A1O60721 1099 aa14.49□□□□□ -0.09
PKD1-203ENST00000423118 CDK11AQ9UQ88 783 aaPredicted RBP14.49□□□□□ -0.09
PKD1-203ENST00000423118 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.48□□□□□ -0.09
PKD1-203ENST00000423118 TRIM26Q12899 539 aaPredicted RBP14.48□□□□□ -0.09
PKD1-203ENST00000423118 ZBTB47Q9UFB7 747 aaPredicted RBP14.4□□□□□ -0.1
PKD1-203ENST00000423118 CANXP27824 592 aaKnown RBP14.38□□□□□ -0.11
PKD1-203ENST00000423118 NBR1Q14596 966 aa14.37□□□□□ -0.11
PKD1-203ENST00000423118 GLIPR1L2Q4G1C9 344 aa14.36□□□□□ -0.11
PKD1-203ENST00000423118 LOC105371045A0A1W2PR82 267 aa14.32□□□□□ -0.12
PKD1-203ENST00000423118 NEUROD1Q13562 356 aa14.32□□□□□ -0.12
PKD1-203ENST00000423118 ANP32AP39687 249 aaKnown RBP14.3□□□□□ -0.12
PKD1-203ENST00000423118 ZNF326Q5BKZ1 582 aaKnown RBP14.3□□□□□ -0.12
PKD1-203ENST00000423118 ABCC9O60706 1549 aa14.28□□□□□ -0.12
PKD1-203ENST00000423118 PABPN1Q86U42 306 aaKnown RBP eCLIP14.23□□□□□ -0.132e-7■■■□□ 15.3
PKD1-203ENST00000423118 ANP32BQ92688 251 aaKnown RBP14.23□□□□□ -0.13
PKD1-203ENST00000423118 AMER1Q5JTC6 1135 aaPredicted RBP14.2□□□□□ -0.14
PKD1-203ENST00000423118 HSP90AA1P07900 732 aaKnown RBP14.19□□□□□ -0.14
PKD1-203ENST00000423118 FAM50AQ14320 339 aaKnown RBP14.17□□□□□ -0.14
PKD1-203ENST00000423118 TRIM52Q96A61 297 aa14.14□□□□□ -0.15
PKD1-203ENST00000423118 ANP32CO43423 234 aa14.13□□□□□ -0.15
PKD1-203ENST00000423118 RTN4Q9NQC3 1192 aaKnown RBP14.05□□□□□ -0.16
PKD1-203ENST00000423118 FKBP8Q14318 412 aa14.04□□□□□ -0.16
PKD1-203ENST00000423118 ACIN1Q9UKV3 1341 aaKnown RBP14.03□□□□□ -0.16
PKD1-203ENST00000423118 TPRNQ4KMQ1 711 aa14.02□□□□□ -0.16
PKD1-203ENST00000423118 TULP1O00294 542 aaPredicted RBP13.97□□□□□ -0.17
PKD1-203ENST00000423118 SALL2Q9Y467 1007 aaPredicted RBP13.96□□□□□ -0.18
PKD1-203ENST00000423118 IRX6P78412 446 aaPredicted RBP13.95□□□□□ -0.18
PKD1-203ENST00000423118 FBLN2P98095 1184 aa13.91□□□□□ -0.18
PKD1-203ENST00000423118 TNNT2P45379 298 aaPredicted RBP13.9□□□□□ -0.18
PKD1-203ENST00000423118 CDK11BP21127 795 aaKnown RBP13.9□□□□□ -0.18
PKD1-203ENST00000423118 UPF2Q9HAU5 1272 aaKnown RBP13.88□□□□□ -0.19
PKD1-203ENST00000423118 NEFMP07197 916 aa13.87□□□□□ -0.19
PKD1-203ENST00000423118 NAP1L5Q96NT1 182 aaPredicted RBP13.86□□□□□ -0.19
PKD1-203ENST00000423118 ARID4BQ4LE39 1312 aaPredicted RBP13.85□□□□□ -0.19
PKD1-203ENST00000423118 PLPPR3Q6T4P5 718 aa13.83□□□□□ -0.2
PKD1-203ENST00000423118 FAM9BQ8IZU0 186 aa13.8□□□□□ -0.2
PKD1-203ENST00000423118 NCBP3Q53F19 620 aaKnown RBP13.79□□□□□ -0.2
PKD1-203ENST00000423118 NCLP19338 710 aaKnown RBP13.79□□□□□ -0.2
PKD1-203ENST00000423118 ARID3AQ99856 593 aa13.79□□□□□ -0.2
PKD1-203ENST00000423118 ARID3CA6NKF2 412 aa13.78□□□□□ -0.2
PKD1-203ENST00000423118 SENP3-EIF4A1A0A087X0R7 540 aa13.78□□□□□ -0.2
PKD1-203ENST00000423118 PTMAP06454 111 aaKnown RBP13.78□□□□□ -0.2
PKD1-203ENST00000423118 TAOK2Q9UL54 1235 aa13.77□□□□□ -0.21
PKD1-203ENST00000423118 HNRNPUQ00839 825 aaKnown RBP eCLIP13.77□□□□□ -0.21
PKD1-203ENST00000423118 DNTTIP2Q5QJE6 756 aaKnown RBP13.76□□□□□ -0.21
PKD1-203ENST00000423118 TRIM44Q96DX7 344 aaPredicted RBP13.76□□□□□ -0.21
PKD1-203ENST00000423118 CCDC136Q96JN2 1154 aa13.76□□□□□ -0.21
PKD1-203ENST00000423118 PLEKHG5O94827 1062 aa13.74□□□□□ -0.21
PKD1-203ENST00000423118 A0A0G2JS52 829 aa13.74□□□□□ -0.21
PKD1-203ENST00000423118 ZBTB7CA1YPR0 619 aa13.73□□□□□ -0.21
PKD1-203ENST00000423118 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.73□□□□□ -0.21
PKD1-203ENST00000423118 SCAF1Q9H7N4 1312 aaKnown RBP13.72□□□□□ -0.21
PKD1-203ENST00000423118 LAS1LQ9Y4W2 734 aaKnown RBP13.72□□□□□ -0.21
PKD1-203ENST00000423118 SCRIBQ14160 1630 aa13.7□□□□□ -0.22
PKD1-203ENST00000423118 SENP3Q9H4L4 574 aaPredicted RBP13.69□□□□□ -0.22
PKD1-203ENST00000423118 P3H3Q8IVL6 736 aa13.64□□□□□ -0.23
PKD1-203ENST00000423118 DDX10Q13206 875 aaKnown RBP13.63□□□□□ -0.23
PKD1-203ENST00000423118 PLCB2Q00722 1185 aa13.59□□□□□ -0.23
PKD1-203ENST00000423118 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms