Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 LINC01003-201ENST00000564834 1764 ntBASIC20.96■□□□□ 0.95
LIN7CQ9NUP9 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.96■□□□□ 0.95
LIN7CQ9NUP9 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
LIN7CQ9NUP9 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC20.96■□□□□ 0.95
LIN7CQ9NUP9 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LIN7CQ9NUP9 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LIN7CQ9NUP9 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LIN7CQ9NUP9 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LIN7CQ9NUP9 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LIN7CQ9NUP9 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
LIN7CQ9NUP9 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LIN7CQ9NUP9 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LIN7CQ9NUP9 AC108673.1-201ENST00000510422 1159 ntBASIC20.93■□□□□ 0.94
LIN7CQ9NUP9 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.93■□□□□ 0.94
LIN7CQ9NUP9 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC20.93■□□□□ 0.94
LIN7CQ9NUP9 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
LIN7CQ9NUP9 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
LIN7CQ9NUP9 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
LIN7CQ9NUP9 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
LIN7CQ9NUP9 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.9■□□□□ 0.94
LIN7CQ9NUP9 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
LIN7CQ9NUP9 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC20.9■□□□□ 0.94
LIN7CQ9NUP9 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
LIN7CQ9NUP9 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
LIN7CQ9NUP9 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LIN7CQ9NUP9 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
LIN7CQ9NUP9 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LIN7CQ9NUP9 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LIN7CQ9NUP9 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LIN7CQ9NUP9 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LIN7CQ9NUP9 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LIN7CQ9NUP9 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.89■□□□□ 0.93
LIN7CQ9NUP9 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LIN7CQ9NUP9 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LIN7CQ9NUP9 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LIN7CQ9NUP9 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
LIN7CQ9NUP9 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.88■□□□□ 0.93
LIN7CQ9NUP9 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
LIN7CQ9NUP9 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LIN7CQ9NUP9 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LIN7CQ9NUP9 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
LIN7CQ9NUP9 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.87■□□□□ 0.93
LIN7CQ9NUP9 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
LIN7CQ9NUP9 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
LIN7CQ9NUP9 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LIN7CQ9NUP9 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LIN7CQ9NUP9 BOD1-206ENST00000480951 814 ntTSL 2 BASIC20.86■□□□□ 0.93
LIN7CQ9NUP9 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LIN7CQ9NUP9 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.86■□□□□ 0.93
LIN7CQ9NUP9 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LIN7CQ9NUP9 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
LIN7CQ9NUP9 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC20.85■□□□□ 0.93
LIN7CQ9NUP9 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
LIN7CQ9NUP9 AC100797.4-201ENST00000631653 1827 ntBASIC20.85■□□□□ 0.93
LIN7CQ9NUP9 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LIN7CQ9NUP9 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LIN7CQ9NUP9 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.84■□□□□ 0.93
LIN7CQ9NUP9 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LIN7CQ9NUP9 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LIN7CQ9NUP9 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LIN7CQ9NUP9 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LIN7CQ9NUP9 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.82■□□□□ 0.92
LIN7CQ9NUP9 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LIN7CQ9NUP9 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC20.82■□□□□ 0.92
LIN7CQ9NUP9 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LIN7CQ9NUP9 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
LIN7CQ9NUP9 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.82■□□□□ 0.92
LIN7CQ9NUP9 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
LIN7CQ9NUP9 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LIN7CQ9NUP9 MIR6090-201ENST00000622481 60 ntBASIC20.81■□□□□ 0.92
LIN7CQ9NUP9 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.81■□□□□ 0.92
LIN7CQ9NUP9 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LIN7CQ9NUP9 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LIN7CQ9NUP9 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
LIN7CQ9NUP9 AP002414.2-202ENST00000590929 1450 ntBASIC20.81■□□□□ 0.92
LIN7CQ9NUP9 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LIN7CQ9NUP9 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LIN7CQ9NUP9 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
LIN7CQ9NUP9 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.8■□□□□ 0.92
LIN7CQ9NUP9 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
LIN7CQ9NUP9 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LIN7CQ9NUP9 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LIN7CQ9NUP9 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LIN7CQ9NUP9 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LIN7CQ9NUP9 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LIN7CQ9NUP9 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
LIN7CQ9NUP9 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.78■□□□□ 0.92
LIN7CQ9NUP9 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.78■□□□□ 0.92
LIN7CQ9NUP9 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LIN7CQ9NUP9 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
LIN7CQ9NUP9 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LIN7CQ9NUP9 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LIN7CQ9NUP9 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.77■□□□□ 0.92
LIN7CQ9NUP9 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
LIN7CQ9NUP9 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
LIN7CQ9NUP9 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
LIN7CQ9NUP9 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LIN7CQ9NUP9 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.76■□□□□ 0.91
LIN7CQ9NUP9 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
LIN7CQ9NUP9 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms