RNA–Protein interactions for RNA: ENST00000302979.4

POLR1D-201, Transcript of RNA polymerase I and III subunit D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene POLR1D, Length 1,166 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1D-201ENST00000302979 NISCHQ9Y2I1 1504 aa63.71■■■■■ 7.79
POLR1D-201ENST00000302979 CCDC180Q9P1Z9 1646 aa56.59■■■■■ 6.65
POLR1D-201ENST00000302979 ABCC9O60706 1549 aa54.99■■■■■ 6.39
POLR1D-201ENST00000302979 ZCCHC6Q5VYS8 1495 aaKnown RBP53.19■■■■■ 6.1
POLR1D-201ENST00000302979 NACADO15069 1562 aa53.06■■■■■ 6.08
POLR1D-201ENST00000302979 RB1CC1Q8TDY2 1594 aa53.04■■■■■ 6.08
POLR1D-201ENST00000302979 MYO15BQ96JP2 1530 aa52.86■■■■■ 6.05
POLR1D-201ENST00000302979 DCAF8L2P0C7V8 631 aa52.84■■■■■ 6.05
POLR1D-201ENST00000302979 DCAF1Q9Y4B6 1507 aa52.76■■■■■ 6.04
POLR1D-201ENST00000302979 UNC13AQ9UPW8 1703 aa52■■■■■ 5.91
POLR1D-201ENST00000302979 SCRIBQ14160 1630 aa51.62■■■■■ 5.85
POLR1D-201ENST00000302979 BICRAQ9NZM4 1560 aa51.53■■■■■ 5.84
POLR1D-201ENST00000302979 PABPN1Q86U42 306 aaKnown RBP eCLIP51.34■■■■■ 5.81
POLR1D-201ENST00000302979 SHROOM4Q9ULL8 1493 aa50.95■■■■■ 5.75
POLR1D-201ENST00000302979 DNAJC5BQ9UF47 199 aa50.18■■■■■ 5.62
POLR1D-201ENST00000302979 EIF4G1Q04637 1599 aaKnown RBP50.09■■■■■ 5.61
POLR1D-201ENST00000302979 CC2D2AQ9P2K1 1620 aa49.82■■■■■ 5.57
POLR1D-201ENST00000302979 CECR2Q9BXF3 1484 aa49.61■■■■■ 5.53
POLR1D-201ENST00000302979 SMARCA4P51532 1647 aa49.42■■■■■ 5.5
POLR1D-201ENST00000302979 BAZ1AQ9NRL2 1556 aaPredicted RBP49.35■■■■■ 5.49
POLR1D-201ENST00000302979 MROH2BQ7Z745 1585 aa49.13■■■■■ 5.46
POLR1D-201ENST00000302979 ATAD2BQ9ULI0 1458 aa49.03■■■■■ 5.44
POLR1D-201ENST00000302979 SMARCA2P51531 1590 aa48.97■■■■■ 5.43
POLR1D-201ENST00000302979 PEG3Q9GZU2 1588 aa48.95■■■■■ 5.43
POLR1D-201ENST00000302979 NCAPD3P42695 1498 aa48.93■■■■■ 5.42
POLR1D-201ENST00000302979 HMGXB3Q12766 1538 aa48.79■■■■■ 5.4
POLR1D-201ENST00000302979 WIZO95785 1651 aa48.63■■■■■ 5.38
POLR1D-201ENST00000302979 RSF1Q96T23 1441 aaPredicted RBP48.62■■■■■ 5.37
POLR1D-201ENST00000302979 BAZ1BQ9UIG0 1483 aaKnown RBP48.61■■■■■ 5.37
POLR1D-201ENST00000302979 TOP2AP11388 1531 aaKnown RBP48.12■■■■■ 5.29
POLR1D-201ENST00000302979 NESP48681 1621 aa47.71■■■■■ 5.23
POLR1D-201ENST00000302979 LAMC3Q9Y6N6 1575 aa47.63■■■■■ 5.22
POLR1D-201ENST00000302979 CCDC88BA6NC98 1476 aa47.5■■■■■ 5.19
POLR1D-201ENST00000302979 CADPSQ9ULU8 1353 aa47.49■■■■■ 5.19
POLR1D-201ENST00000302979 SUPT5HO00267 1087 aaKnown RBP47.43■■■■■ 5.18
POLR1D-201ENST00000302979 CFTRP13569 1480 aa47.32■■■■■ 5.17
POLR1D-201ENST00000302979 ERCC6Q03468 1493 aa47.32■■■■■ 5.17
POLR1D-201ENST00000302979 KIF21AQ7Z4S6 1674 aa47.22■■■■■ 5.15
POLR1D-201ENST00000302979 PDS5BQ9NTI5 1447 aa47.21■■■■■ 5.15
POLR1D-201ENST00000302979 PRDM2Q13029 1718 aa47.1■■■■■ 5.13
POLR1D-201ENST00000302979 THOC2Q8NI27 1593 aaKnown RBP47.02■■■■■ 5.12
POLR1D-201ENST00000302979 FANCD2Q9BXW9 1451 aa46.98■■■■■ 5.11
POLR1D-201ENST00000302979 CEP164Q9UPV0 1460 aa46.89■■■■■ 5.1
POLR1D-201ENST00000302979 CUX2O14529 1486 aa46.78■■■■■ 5.08
POLR1D-201ENST00000302979 MRC2Q9UBG0 1479 aa46.77■■■■■ 5.08
POLR1D-201ENST00000302979 WDR62O43379 1518 aa46.68■■■■■ 5.06
POLR1D-201ENST00000302979 URB2Q14146 1524 aaKnown RBP46.54■■■■■ 5.04
POLR1D-201ENST00000302979 TOPBP1Q92547 1522 aa46.29■■■■■ 5
POLR1D-201ENST00000302979 DNMBPQ6XZF7 1577 aa46.28■■■■■ 5
POLR1D-201ENST00000302979 ABCC8Q09428 1581 aa46.22■■■■■ 4.99
POLR1D-201ENST00000302979 CUX1P39880 1505 aa46.08■■■■■ 4.97
POLR1D-201ENST00000302979 POLA1P09884 1462 aaPredicted RBP45.93■■■■■ 4.94
POLR1D-201ENST00000302979 IFT140Q96RY7 1462 aa45.88■■■■■ 4.94
POLR1D-201ENST00000302979 FGD5Q6ZNL6 1462 aa45.84■■■■■ 4.93
POLR1D-201ENST00000302979 TARBP1Q13395 1621 aaKnown RBP45.82■■■■■ 4.93
POLR1D-201ENST00000302979 WRNQ14191 1432 aaPredicted RBP eCLIP45.8■■■■■ 4.92
POLR1D-201ENST00000302979 BIVM-ERCC5R4GMW8 1640 aa45.79■■■■■ 4.92
POLR1D-201ENST00000302979 SYNJ1O43426 1573 aa45.79■■■■■ 4.92
POLR1D-201ENST00000302979 TOP2BQ02880 1626 aa45.76■■■■■ 4.92
POLR1D-201ENST00000302979 ZNF608Q9ULD9 1512 aaPredicted RBP45.7■■■■■ 4.91
POLR1D-201ENST00000302979 RAD54L2Q9Y4B4 1467 aa45.69■■■■■ 4.91
POLR1D-201ENST00000302979 SOGA1O94964 1423 aa45.64■■■■■ 4.9
POLR1D-201ENST00000302979 EIF4G3O43432 1585 aaKnown RBP45.59■■■■■ 4.89
POLR1D-201ENST00000302979 WDR97A6NE52 1622 aa45.59■■■■■ 4.89
POLR1D-201ENST00000302979 AQRO60306 1485 aaKnown RBP eCLIP45.42■■■■■ 4.866e-7■□□□□ 10.5
POLR1D-201ENST00000302979 ABCA10Q8WWZ4 1543 aa45.42■■■■■ 4.86
POLR1D-201ENST00000302979 TDRD9Q8NDG6 1382 aaKnown RBP45.35■■■■■ 4.85
POLR1D-201ENST00000302979 ABCA5Q8WWZ7 1642 aa45.3■■■■■ 4.84
POLR1D-201ENST00000302979 PBRM1Q86U86 1689 aa45.17■■■■■ 4.82
POLR1D-201ENST00000302979 GAPVD1Q14C86 1478 aa45.17■■■■■ 4.82
POLR1D-201ENST00000302979 GRIN2BQ13224 1484 aa45.12■■■■■ 4.81
POLR1D-201ENST00000302979 SNAPC4Q5SXM2 1469 aa45.06■■■■■ 4.8
POLR1D-201ENST00000302979 MAGI1Q96QZ7 1491 aaPredicted RBP44.99■■■■■ 4.79
POLR1D-201ENST00000302979 CHD1O14646 1710 aa44.97■■■■■ 4.79
POLR1D-201ENST00000302979 DNAJC5Q9H3Z4 198 aa44.9■■■■■ 4.78
POLR1D-201ENST00000302979 ERICH3Q5RHP9 1530 aa44.87■■■■■ 4.77
POLR1D-201ENST00000302979 ADAMTS12P58397 1594 aa44.82■■■■■ 4.77
POLR1D-201ENST00000302979 SYNJ2O15056 1496 aa44.8■■■■■ 4.76
POLR1D-201ENST00000302979 KIF27Q86VH2 1401 aa44.79■■■■■ 4.76
POLR1D-201ENST00000302979 TRIM41Q8WV44 630 aa44.76■■■■■ 4.76
POLR1D-201ENST00000302979 OSCARQ8IYS5 282 aa44.74■■■■■ 4.75
POLR1D-201ENST00000302979 FBLN2P98095 1184 aa44.67■■■■■ 4.74
POLR1D-201ENST00000302979 FHAD1B1AJZ9 1412 aa44.65■■■■■ 4.74
POLR1D-201ENST00000302979 CHMP7Q8WUX9 453 aaPredicted RBP44.62■■■■■ 4.73
POLR1D-201ENST00000302979 IGF1RP08069 1367 aa44.58■■■■■ 4.73
POLR1D-201ENST00000302979 GRIN2AQ12879 1464 aa44.58■■■■■ 4.73
POLR1D-201ENST00000302979 RUSC2Q8N2Y8 1516 aa44.55■■■■■ 4.72
POLR1D-201ENST00000302979 CUL7Q14999 1698 aa44.55■■■■■ 4.72
POLR1D-201ENST00000302979 CLASP1Q7Z460 1538 aa44.49■■■■■ 4.71
POLR1D-201ENST00000302979 CHIC1Q5VXU3 224 aa44.48■■■■■ 4.71
POLR1D-201ENST00000302979 CEP170Q5SW79 1584 aa44.4■■■■■ 4.7
POLR1D-201ENST00000302979 NUP160Q12769 1436 aa44.39■■■■■ 4.7
POLR1D-201ENST00000302979 CARMIL1Q5VZK9 1371 aa44.31■■■■■ 4.68
POLR1D-201ENST00000302979 RIMBP3CA6NJZ7 1639 aa44.2■■■■■ 4.67
POLR1D-201ENST00000302979 RIMBP3BA6NNM3 1639 aa44.2■■■■■ 4.67
POLR1D-201ENST00000302979 RIMBP3Q9UFD9 1639 aa44.2■■■■■ 4.67
POLR1D-201ENST00000302979 ARHGEF11O15085 1522 aa44.19■■■■■ 4.67
POLR1D-201ENST00000302979 EEA1Q15075 1411 aa44.13■■■■■ 4.65
POLR1D-201ENST00000302979 RAPGEF2Q9Y4G8 1499 aa44.12■■■■■ 4.65
POLR1D-201ENST00000302979 SHROOM2Q13796 1616 aa44.08■■■■■ 4.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms