RNA–Protein interactions for RNA: ENST00000394836.6

RAB3IL1-202, Transcript of RAB3A interacting protein like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IL1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1-202ENST00000394836 NISCHQ9Y2I1 1504 aa54.34■■■■■ 6.29
RAB3IL1-202ENST00000394836 CCDC180Q9P1Z9 1646 aa46.86■■■■■ 5.09
RAB3IL1-202ENST00000394836 ZCCHC6Q5VYS8 1495 aaKnown RBP45.79■■■■■ 4.92
RAB3IL1-202ENST00000394836 SHROOM4Q9ULL8 1493 aa45.21■■■■■ 4.83
RAB3IL1-202ENST00000394836 DCAF8L2P0C7V8 631 aa45.21■■■■■ 4.83
RAB3IL1-202ENST00000394836 DCAF1Q9Y4B6 1507 aa44.82■■■■■ 4.77
RAB3IL1-202ENST00000394836 ABCC9O60706 1549 aa44.33■■■■■ 4.69
RAB3IL1-202ENST00000394836 MYO15BQ96JP2 1530 aa43.93■■■■■ 4.62
RAB3IL1-202ENST00000394836 SUPT5HO00267 1087 aaKnown RBP43.93■■■■■ 4.62
RAB3IL1-202ENST00000394836 NACADO15069 1562 aa43.61■■■■■ 4.57
RAB3IL1-202ENST00000394836 SCRIBQ14160 1630 aa43.57■■■■■ 4.57
RAB3IL1-202ENST00000394836 RB1CC1Q8TDY2 1594 aa43.15■■■■■ 4.5
RAB3IL1-202ENST00000394836 RSF1Q96T23 1441 aaPredicted RBP42.58■■■■■ 4.41
RAB3IL1-202ENST00000394836 CHIC1Q5VXU3 224 aa42.49■■■■■ 4.39
RAB3IL1-202ENST00000394836 CECR2Q9BXF3 1484 aa42.4■■■■■ 4.38
RAB3IL1-202ENST00000394836 UNC13AQ9UPW8 1703 aa42.38■■■■■ 4.38
RAB3IL1-202ENST00000394836 MROH2BQ7Z745 1585 aa42.14■■■■■ 4.34
RAB3IL1-202ENST00000394836 PABPN1Q86U42 306 aaKnown RBP eCLIP42.08■■■■■ 4.33
RAB3IL1-202ENST00000394836 BICRAQ9NZM4 1560 aa41.98■■■■■ 4.31
RAB3IL1-202ENST00000394836 BAZ1AQ9NRL2 1556 aaPredicted RBP41.85■■■■■ 4.29
RAB3IL1-202ENST00000394836 WIZO95785 1651 aa41.82■■■■■ 4.29
RAB3IL1-202ENST00000394836 SMARCA4P51532 1647 aa41.64■■■■■ 4.26
RAB3IL1-202ENST00000394836 TOP2AP11388 1531 aaKnown RBP41.24■■■■■ 4.19
RAB3IL1-202ENST00000394836 TRIM41Q8WV44 630 aa41.17■■■■■ 4.18
RAB3IL1-202ENST00000394836 LOC105371045A0A1W2PR82 267 aa41.01■■■■■ 4.16
RAB3IL1-202ENST00000394836 CCDC88BA6NC98 1476 aa40.98■■■■■ 4.15
RAB3IL1-202ENST00000394836 PEG3Q9GZU2 1588 aa40.97■■■■■ 4.15
RAB3IL1-202ENST00000394836 SMARCA2P51531 1590 aa40.94■■■■■ 4.14
RAB3IL1-202ENST00000394836 EIF4G1Q04637 1599 aaKnown RBP40.92■■■■■ 4.14
RAB3IL1-202ENST00000394836 ATAD2BQ9ULI0 1458 aa40.88■■■■■ 4.14
RAB3IL1-202ENST00000394836 BAZ1BQ9UIG0 1483 aaKnown RBP40.68■■■■■ 4.1
RAB3IL1-202ENST00000394836 FAM9AQ8IZU1 332 aaPredicted RBP40.53■■■■■ 4.08
RAB3IL1-202ENST00000394836 ABCC8Q09428 1581 aa40.41■■■■■ 4.06
RAB3IL1-202ENST00000394836 NCAPD3P42695 1498 aa40.35■■■■■ 4.05
RAB3IL1-202ENST00000394836 HMGXB3Q12766 1538 aa40.25■■■■■ 4.03
RAB3IL1-202ENST00000394836 EHMT2Q96KQ7 1210 aa40.06■■■■■ 4
RAB3IL1-202ENST00000394836 PCGF6Q9BYE7 350 aa40.04■■■■■ 4
RAB3IL1-202ENST00000394836 WRNQ14191 1432 aaPredicted RBP eCLIP40.01■■■■□ 3.99
RAB3IL1-202ENST00000394836 CC2D2AQ9P2K1 1620 aa39.96■■■■□ 3.99
RAB3IL1-202ENST00000394836 SOGA1O94964 1423 aa39.9■■■■□ 3.98
RAB3IL1-202ENST00000394836 EEA1Q15075 1411 aa39.81■■■■□ 3.96
RAB3IL1-202ENST00000394836 SYNJ1O43426 1573 aa39.78■■■■□ 3.96
RAB3IL1-202ENST00000394836 TRIM26Q12899 539 aaPredicted RBP39.72■■■■□ 3.95
RAB3IL1-202ENST00000394836 RUSC2Q8N2Y8 1516 aa39.71■■■■□ 3.95
RAB3IL1-202ENST00000394836 CSRNP3Q8WYN3 585 aa39.7■■■■□ 3.95
RAB3IL1-202ENST00000394836 CFTRP13569 1480 aa39.66■■■■□ 3.94
RAB3IL1-202ENST00000394836 HRCP23327 699 aa39.55■■■■□ 3.92
RAB3IL1-202ENST00000394836 TOP2BQ02880 1626 aa39.5■■■■□ 3.91
RAB3IL1-202ENST00000394836 TNIKQ9UKE5 1360 aa39.46■■■■□ 3.91
RAB3IL1-202ENST00000394836 CADPSQ9ULU8 1353 aa39.45■■■■□ 3.91
RAB3IL1-202ENST00000394836 BIVM-ERCC5R4GMW8 1640 aa39.39■■■■□ 3.9
RAB3IL1-202ENST00000394836 GOLGA3Q08378 1498 aa39.35■■■■□ 3.89
RAB3IL1-202ENST00000394836 CUX1P39880 1505 aa39.33■■■■□ 3.89
RAB3IL1-202ENST00000394836 CEP162Q5TB80 1403 aa39.32■■■■□ 3.89
RAB3IL1-202ENST00000394836 UBTFP17480 764 aaKnown RBP39.29■■■■□ 3.88
RAB3IL1-202ENST00000394836 CEP164Q9UPV0 1460 aa39.26■■■■□ 3.88
RAB3IL1-202ENST00000394836 PRDM2Q13029 1718 aa39.24■■■■□ 3.87
RAB3IL1-202ENST00000394836 KIF21BO75037 1637 aa39.23■■■■□ 3.87
RAB3IL1-202ENST00000394836 DNAJC5BQ9UF47 199 aa39.23■■■■□ 3.87
RAB3IL1-202ENST00000394836 NESP48681 1621 aa39.11■■■■□ 3.85
RAB3IL1-202ENST00000394836 FANCD2Q9BXW9 1451 aa39.04■■■■□ 3.84
RAB3IL1-202ENST00000394836 PPARGC1BQ86YN6 1023 aaKnown RBP39.02■■■■□ 3.84
RAB3IL1-202ENST00000394836 RAPGEF2Q9Y4G8 1499 aa39■■■■□ 3.83
RAB3IL1-202ENST00000394836 KIF27Q86VH2 1401 aa38.9■■■■□ 3.82
RAB3IL1-202ENST00000394836 PRXQ9BXM0 1461 aa38.89■■■■□ 3.82
RAB3IL1-202ENST00000394836 FGD5Q6ZNL6 1462 aa38.82■■■■□ 3.8
RAB3IL1-202ENST00000394836 LAMC3Q9Y6N6 1575 aa38.82■■■■□ 3.8
RAB3IL1-202ENST00000394836 ERICH3Q5RHP9 1530 aa38.82■■■■□ 3.8
RAB3IL1-202ENST00000394836 CLIP1P30622 1438 aa38.81■■■■□ 3.8
RAB3IL1-202ENST00000394836 CUX2O14529 1486 aa38.71■■■■□ 3.79
RAB3IL1-202ENST00000394836 DNMBPQ6XZF7 1577 aa38.66■■■■□ 3.78
RAB3IL1-202ENST00000394836 TOPBP1Q92547 1522 aa38.65■■■■□ 3.78
RAB3IL1-202ENST00000394836 RANGAP1P46060 587 aaPredicted RBP38.62■■■■□ 3.77
RAB3IL1-202ENST00000394836 PDS5BQ9NTI5 1447 aa38.6■■■■□ 3.77
RAB3IL1-202ENST00000394836 VPS8Q8N3P4 1428 aa38.58■■■■□ 3.77
RAB3IL1-202ENST00000394836 IGF1RP08069 1367 aa38.56■■■■□ 3.76
RAB3IL1-202ENST00000394836 RAD54L2Q9Y4B4 1467 aa38.56■■■■□ 3.76
RAB3IL1-202ENST00000394836 POLA1P09884 1462 aaPredicted RBP38.55■■■■□ 3.76
RAB3IL1-202ENST00000394836 URB2Q14146 1524 aaKnown RBP38.54■■■■□ 3.76
RAB3IL1-202ENST00000394836 ZEB1P37275 1124 aaPredicted RBP38.52■■■■□ 3.76
RAB3IL1-202ENST00000394836 TTBK1Q5TCY1 1321 aaPredicted RBP38.48■■■■□ 3.75
RAB3IL1-202ENST00000394836 KIF21AQ7Z4S6 1674 aa38.45■■■■□ 3.75
RAB3IL1-202ENST00000394836 ABCA10Q8WWZ4 1543 aa38.38■■■■□ 3.73
RAB3IL1-202ENST00000394836 CARMIL1Q5VZK9 1371 aa38.34■■■■□ 3.73
RAB3IL1-202ENST00000394836 ARAP1Q96P48 1450 aa38.31■■■■□ 3.72
RAB3IL1-202ENST00000394836 APLP2Q06481 763 aa38.26■■■■□ 3.72
RAB3IL1-202ENST00000394836 TDRD9Q8NDG6 1382 aaKnown RBP38.17■■■■□ 3.7
RAB3IL1-202ENST00000394836 ARHGAP35Q9NRY4 1499 aa38.16■■■■□ 3.7
RAB3IL1-202ENST00000394836 WDR97A6NE52 1622 aa38.12■■■■□ 3.69
RAB3IL1-202ENST00000394836 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.12■■■■□ 3.69
RAB3IL1-202ENST00000394836 MRC2Q9UBG0 1479 aa38.07■■■■□ 3.68
RAB3IL1-202ENST00000394836 CCER1Q8TC90 406 aaPredicted RBP38.01■■■■□ 3.68
RAB3IL1-202ENST00000394836 GAPVD1Q14C86 1478 aa38■■■■□ 3.67
RAB3IL1-202ENST00000394836 ABCA5Q8WWZ7 1642 aa37.99■■■■□ 3.67
RAB3IL1-202ENST00000394836 TARBP1Q13395 1621 aaKnown RBP37.98■■■■□ 3.67
RAB3IL1-202ENST00000394836 CUL7Q14999 1698 aa37.95■■■■□ 3.67
RAB3IL1-202ENST00000394836 KANK4Q5T7N3 995 aaPredicted RBP37.89■■■■□ 3.66
RAB3IL1-202ENST00000394836 ERCC6Q03468 1493 aa37.85■■■■□ 3.65
RAB3IL1-202ENST00000394836 AQRO60306 1485 aaKnown RBP eCLIP37.81■■■■□ 3.642e-6■■■■□ 22.7
RAB3IL1-202ENST00000394836 WDR62O43379 1518 aa37.81■■■■□ 3.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms