RNA–Protein interactions for RNA: ENST00000229266.7

CHPT1-201, Transcript of choline phosphotransferase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CHPT1, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-201ENST00000229266 NISCHQ9Y2I1 1504 aa62.79■■■■■ 7.64
CHPT1-201ENST00000229266 CCDC180Q9P1Z9 1646 aa55.39■■■■■ 6.46
CHPT1-201ENST00000229266 ABCC9O60706 1549 aa53.72■■■■■ 6.19
CHPT1-201ENST00000229266 ZCCHC6Q5VYS8 1495 aaKnown RBP52.44■■■■■ 5.99
CHPT1-201ENST00000229266 DCAF8L2P0C7V8 631 aa52.31■■■■■ 5.96
CHPT1-201ENST00000229266 NACADO15069 1562 aa51.94■■■■■ 5.91
CHPT1-201ENST00000229266 DCAF1Q9Y4B6 1507 aa51.89■■■■■ 5.9
CHPT1-201ENST00000229266 RB1CC1Q8TDY2 1594 aa51.83■■■■■ 5.89
CHPT1-201ENST00000229266 MYO15BQ96JP2 1530 aa51.82■■■■■ 5.89
CHPT1-201ENST00000229266 SCRIBQ14160 1630 aa50.74■■■■■ 5.71
CHPT1-201ENST00000229266 UNC13AQ9UPW8 1703 aa50.73■■■■■ 5.71
CHPT1-201ENST00000229266 PABPN1Q86U42 306 aaKnown RBP eCLIP50.38■■■■■ 5.66
CHPT1-201ENST00000229266 BICRAQ9NZM4 1560 aa50.35■■■■■ 5.65
CHPT1-201ENST00000229266 SHROOM4Q9ULL8 1493 aa50.19■■■■■ 5.62
CHPT1-201ENST00000229266 CECR2Q9BXF3 1484 aa48.93■■■■■ 5.42
CHPT1-201ENST00000229266 EIF4G1Q04637 1599 aaKnown RBP48.93■■■■■ 5.42
CHPT1-201ENST00000229266 DNAJC5BQ9UF47 199 aa48.79■■■■■ 5.4
CHPT1-201ENST00000229266 CC2D2AQ9P2K1 1620 aa48.56■■■■■ 5.36
CHPT1-201ENST00000229266 BAZ1AQ9NRL2 1556 aaPredicted RBP48.56■■■■■ 5.36
CHPT1-201ENST00000229266 SMARCA4P51532 1647 aa48.55■■■■■ 5.36
CHPT1-201ENST00000229266 MROH2BQ7Z745 1585 aa48.46■■■■■ 5.35
CHPT1-201ENST00000229266 RSF1Q96T23 1441 aaPredicted RBP48.15■■■■■ 5.3
CHPT1-201ENST00000229266 ATAD2BQ9ULI0 1458 aa48.14■■■■■ 5.3
CHPT1-201ENST00000229266 SMARCA2P51531 1590 aa48.03■■■■■ 5.28
CHPT1-201ENST00000229266 PEG3Q9GZU2 1588 aa48.02■■■■■ 5.28
CHPT1-201ENST00000229266 NCAPD3P42695 1498 aa47.98■■■■■ 5.27
CHPT1-201ENST00000229266 WIZO95785 1651 aa47.97■■■■■ 5.27
CHPT1-201ENST00000229266 HMGXB3Q12766 1538 aa47.76■■■■■ 5.24
CHPT1-201ENST00000229266 BAZ1BQ9UIG0 1483 aaKnown RBP47.75■■■■■ 5.23
CHPT1-201ENST00000229266 SUPT5HO00267 1087 aaKnown RBP47.56■■■■■ 5.2
CHPT1-201ENST00000229266 TOP2AP11388 1531 aaKnown RBP47.42■■■■■ 5.18
CHPT1-201ENST00000229266 CCDC88BA6NC98 1476 aa46.94■■■■■ 5.1
CHPT1-201ENST00000229266 NESP48681 1621 aa46.72■■■■■ 5.07
CHPT1-201ENST00000229266 CADPSQ9ULU8 1353 aa46.65■■■■■ 5.06
CHPT1-201ENST00000229266 LAMC3Q9Y6N6 1575 aa46.55■■■■■ 5.04
CHPT1-201ENST00000229266 CFTRP13569 1480 aa46.51■■■■■ 5.04
CHPT1-201ENST00000229266 PDS5BQ9NTI5 1447 aa46.23■■■■■ 4.99
CHPT1-201ENST00000229266 ERCC6Q03468 1493 aa46.16■■■■■ 4.98
CHPT1-201ENST00000229266 FANCD2Q9BXW9 1451 aa46.11■■■■■ 4.97
CHPT1-201ENST00000229266 KIF21AQ7Z4S6 1674 aa46.1■■■■■ 4.97
CHPT1-201ENST00000229266 PRDM2Q13029 1718 aa46.1■■■■■ 4.97
CHPT1-201ENST00000229266 CEP164Q9UPV0 1460 aa45.95■■■■■ 4.95
CHPT1-201ENST00000229266 THOC2Q8NI27 1593 aaKnown RBP45.76■■■■■ 4.92
CHPT1-201ENST00000229266 MRC2Q9UBG0 1479 aa45.74■■■■■ 4.91
CHPT1-201ENST00000229266 URB2Q14146 1524 aaKnown RBP45.64■■■■■ 4.9
CHPT1-201ENST00000229266 WDR62O43379 1518 aa45.56■■■■■ 4.88
CHPT1-201ENST00000229266 ABCC8Q09428 1581 aa45.48■■■■■ 4.87
CHPT1-201ENST00000229266 TOPBP1Q92547 1522 aa45.45■■■■■ 4.87
CHPT1-201ENST00000229266 DNMBPQ6XZF7 1577 aa45.41■■■■■ 4.86
CHPT1-201ENST00000229266 CUX1P39880 1505 aa45.4■■■■■ 4.86
CHPT1-201ENST00000229266 CUX2O14529 1486 aa45.36■■■■■ 4.85
CHPT1-201ENST00000229266 WRNQ14191 1432 aaPredicted RBP eCLIP45.35■■■■■ 4.851e-7■■■■■ 66.8
CHPT1-201ENST00000229266 SYNJ1O43426 1573 aa45.22■■■■■ 4.83
CHPT1-201ENST00000229266 TOP2BQ02880 1626 aa45.13■■■■■ 4.82
CHPT1-201ENST00000229266 POLA1P09884 1462 aaPredicted RBP45.13■■■■■ 4.81
CHPT1-201ENST00000229266 FGD5Q6ZNL6 1462 aa45.12■■■■■ 4.81
CHPT1-201ENST00000229266 BIVM-ERCC5R4GMW8 1640 aa45.1■■■■■ 4.81
CHPT1-201ENST00000229266 RAD54L2Q9Y4B4 1467 aa44.99■■■■■ 4.79
CHPT1-201ENST00000229266 SOGA1O94964 1423 aa44.96■■■■■ 4.79
CHPT1-201ENST00000229266 IFT140Q96RY7 1462 aa44.94■■■■■ 4.78
CHPT1-201ENST00000229266 TARBP1Q13395 1621 aaKnown RBP44.89■■■■■ 4.78
CHPT1-201ENST00000229266 TRIM41Q8WV44 630 aa44.81■■■■■ 4.76
CHPT1-201ENST00000229266 ZNF608Q9ULD9 1512 aaPredicted RBP44.8■■■■■ 4.76
CHPT1-201ENST00000229266 CHIC1Q5VXU3 224 aa44.78■■■■■ 4.76
CHPT1-201ENST00000229266 ABCA10Q8WWZ4 1543 aa44.68■■■■■ 4.74
CHPT1-201ENST00000229266 TDRD9Q8NDG6 1382 aaKnown RBP44.68■■■■■ 4.74
CHPT1-201ENST00000229266 WDR97A6NE52 1622 aa44.66■■■■■ 4.74
CHPT1-201ENST00000229266 AQRO60306 1485 aaKnown RBP eCLIP44.64■■■■■ 4.743e-7■■■■□ 24
CHPT1-201ENST00000229266 EIF4G3O43432 1585 aaKnown RBP44.56■■■■■ 4.72
CHPT1-201ENST00000229266 ABCA5Q8WWZ7 1642 aa44.44■■■■■ 4.7
CHPT1-201ENST00000229266 GAPVD1Q14C86 1478 aa44.43■■■■■ 4.7
CHPT1-201ENST00000229266 KIF27Q86VH2 1401 aa44.31■■■■■ 4.68
CHPT1-201ENST00000229266 GRIN2BQ13224 1484 aa44.29■■■■■ 4.68
CHPT1-201ENST00000229266 RUSC2Q8N2Y8 1516 aa44.29■■■■■ 4.68
CHPT1-201ENST00000229266 PBRM1Q86U86 1689 aa44.24■■■■■ 4.67
CHPT1-201ENST00000229266 SNAPC4Q5SXM2 1469 aa44.19■■■■■ 4.66
CHPT1-201ENST00000229266 IGF1RP08069 1367 aa44.12■■■■■ 4.65
CHPT1-201ENST00000229266 ERICH3Q5RHP9 1530 aa44.12■■■■■ 4.65
CHPT1-201ENST00000229266 MAGI1Q96QZ7 1491 aaPredicted RBP44.08■■■■■ 4.65
CHPT1-201ENST00000229266 FBLN2P98095 1184 aa43.97■■■■■ 4.63
CHPT1-201ENST00000229266 FAM9AQ8IZU1 332 aaPredicted RBP43.97■■■■■ 4.63
CHPT1-201ENST00000229266 ADAMTS12P58397 1594 aa43.96■■■■■ 4.63
CHPT1-201ENST00000229266 SYNJ2O15056 1496 aa43.93■■■■■ 4.62
CHPT1-201ENST00000229266 FHAD1B1AJZ9 1412 aa43.92■■■■■ 4.62
CHPT1-201ENST00000229266 CHMP7Q8WUX9 453 aaPredicted RBP43.91■■■■■ 4.62
CHPT1-201ENST00000229266 CHD1O14646 1710 aa43.87■■■■■ 4.61
CHPT1-201ENST00000229266 EEA1Q15075 1411 aa43.86■■■■■ 4.61
CHPT1-201ENST00000229266 CARMIL1Q5VZK9 1371 aa43.85■■■■■ 4.61
CHPT1-201ENST00000229266 CSRNP3Q8WYN3 585 aa43.84■■■■■ 4.61
CHPT1-201ENST00000229266 CUL7Q14999 1698 aa43.82■■■■■ 4.61
CHPT1-201ENST00000229266 GRIN2AQ12879 1464 aa43.75■■■■■ 4.59
CHPT1-201ENST00000229266 OSCARQ8IYS5 282 aa43.7■■■■■ 4.59
CHPT1-201ENST00000229266 PRXQ9BXM0 1461 aa43.68■■■■■ 4.58
CHPT1-201ENST00000229266 RAPGEF2Q9Y4G8 1499 aa43.63■■■■■ 4.57
CHPT1-201ENST00000229266 CEP170Q5SW79 1584 aa43.53■■■■■ 4.56
CHPT1-201ENST00000229266 NUP160Q12769 1436 aa43.52■■■■■ 4.56
CHPT1-201ENST00000229266 EHMT2Q96KQ7 1210 aa43.41■■■■■ 4.54
CHPT1-201ENST00000229266 CLASP1Q7Z460 1538 aa43.4■■■■■ 4.54
CHPT1-201ENST00000229266 KIF21BO75037 1637 aa43.4■■■■■ 4.54
CHPT1-201ENST00000229266 DNAJC5Q9H3Z4 198 aa43.27■■■■■ 4.52
Retrieved 100 of 20,778 RNA–protein pairs in 500.9 ms