RNA–Protein interactions for RNA: ENST00000640523.1

KCNMA1-283, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 5,425 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-283ENST00000640523 DCAF8L2P0C7V8 631 aa38.76■■■■□ 3.8
KCNMA1-283ENST00000640523 SUPT5HO00267 1087 aaKnown RBP37.41■■■■□ 3.58
KCNMA1-283ENST00000640523 PELP1Q8IZL8 1130 aaKnown RBP36.85■■■■□ 3.49
KCNMA1-283ENST00000640523 NISCHQ9Y2I1 1504 aa36.59■■■■□ 3.45
KCNMA1-283ENST00000640523 SHROOM4Q9ULL8 1493 aa36.35■■■■□ 3.41
KCNMA1-283ENST00000640523 EHMT2Q96KQ7 1210 aa36.12■■■■□ 3.37
KCNMA1-283ENST00000640523 PCGF6Q9BYE7 350 aa35.93■■■■□ 3.34
KCNMA1-283ENST00000640523 CENPBP07199 599 aaPredicted RBP35.69■■■■□ 3.3
KCNMA1-283ENST00000640523 APLP2Q06481 763 aa35.57■■■■□ 3.28
KCNMA1-283ENST00000640523 ZEB1P37275 1124 aaPredicted RBP35.57■■■■□ 3.28
KCNMA1-283ENST00000640523 MYT1Q01538 1121 aa35.55■■■■□ 3.28
KCNMA1-283ENST00000640523 ERICH6Q7L0X2 663 aa35.25■■■■□ 3.23
KCNMA1-283ENST00000640523 FAM9AQ8IZU1 332 aaPredicted RBP35.25■■■■□ 3.23
KCNMA1-283ENST00000640523 CCER1Q8TC90 406 aaPredicted RBP35.12■■■■□ 3.21
KCNMA1-283ENST00000640523 TTBK1Q5TCY1 1321 aaPredicted RBP35.02■■■■□ 3.2
KCNMA1-283ENST00000640523 TRIM41Q8WV44 630 aa34.62■■■■□ 3.13
KCNMA1-283ENST00000640523 NEFLP07196 543 aa34.58■■■■□ 3.13
KCNMA1-283ENST00000640523 HRCP23327 699 aa34.58■■■■□ 3.13
KCNMA1-283ENST00000640523 YTHDC1Q96MU7 727 aaKnown RBP34.55■■■■□ 3.12
KCNMA1-283ENST00000640523 RANGAP1P46060 587 aaPredicted RBP34.41■■■■□ 3.1
KCNMA1-283ENST00000640523 TRIM26Q12899 539 aaPredicted RBP34.34■■■■□ 3.09
KCNMA1-283ENST00000640523 UBTFP17480 764 aaKnown RBP34.11■■■■□ 3.05
KCNMA1-283ENST00000640523 ATP1B4Q9UN42 357 aaPredicted RBP34.09■■■■□ 3.05
KCNMA1-283ENST00000640523 PPARGC1BQ86YN6 1023 aaKnown RBP33.88■■■■□ 3.01
KCNMA1-283ENST00000640523 CHIC1Q5VXU3 224 aa33.54■■■□□ 2.96
KCNMA1-283ENST00000640523 LOC105371045A0A1W2PR82 267 aa33.51■■■□□ 2.96
KCNMA1-283ENST00000640523 DAXXQ9UER7 740 aaPredicted RBP33.48■■■□□ 2.95
KCNMA1-283ENST00000640523 DIEXFQ68CQ4 756 aaKnown RBP33.38■■■□□ 2.93
KCNMA1-283ENST00000640523 HNRNPUL2Q1KMD3 747 aaKnown RBP33.19■■■□□ 2.9
KCNMA1-283ENST00000640523 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.14■■■□□ 2.9
KCNMA1-283ENST00000640523 RTL5Q5HYW3 569 aaPredicted RBP33.13■■■□□ 2.89
KCNMA1-283ENST00000640523 ITGAEP38570 1179 aa33.11■■■□□ 2.89
KCNMA1-283ENST00000640523 GTF3C3Q9Y5Q9 886 aa33.08■■■□□ 2.89
KCNMA1-283ENST00000640523 POLR3GLQ9BT43 218 aa32.94■■■□□ 2.86
KCNMA1-283ENST00000640523 MYT1LQ9UL68 1186 aa32.73■■■□□ 2.83
KCNMA1-283ENST00000640523 ZNF316A6NFI3 1004 aaPredicted RBP32.73■■■□□ 2.83
KCNMA1-283ENST00000640523 CNGB1Q14028 1251 aaPredicted RBP32.71■■■□□ 2.83
KCNMA1-283ENST00000640523 ACIN1Q9UKV3 1341 aaKnown RBP32.67■■■□□ 2.82
KCNMA1-283ENST00000640523 BCANQ96GW7 911 aa32.62■■■□□ 2.81
KCNMA1-283ENST00000640523 CLSPNQ9HAW4 1339 aa32.53■■■□□ 2.8
KCNMA1-283ENST00000640523 CDK11AQ9UQ88 783 aaPredicted RBP32.52■■■□□ 2.8
KCNMA1-283ENST00000640523 ANP32CO43423 234 aa32.34■■■□□ 2.77
KCNMA1-283ENST00000640523 SLC4A1APQ9BWU0 796 aaKnown RBP32.25■■■□□ 2.75
KCNMA1-283ENST00000640523 NEUROD1Q13562 356 aa32.21■■■□□ 2.75
KCNMA1-283ENST00000640523 FAM50AQ14320 339 aaKnown RBP32.2■■■□□ 2.75
KCNMA1-283ENST00000640523 TRIM52Q96A61 297 aa32.02■■■□□ 2.72
KCNMA1-283ENST00000640523 ANP32AP39687 249 aaKnown RBP31.99■■■□□ 2.71
KCNMA1-283ENST00000640523 FKBP8Q14318 412 aa31.78■■■□□ 2.68
KCNMA1-283ENST00000640523 SCAF1Q9H7N4 1312 aaKnown RBP31.73■■■□□ 2.67
KCNMA1-283ENST00000640523 EIF5BO60841 1220 aaKnown RBP31.69■■■□□ 2.66
KCNMA1-283ENST00000640523 DCAF1Q9Y4B6 1507 aa31.68■■■□□ 2.66
KCNMA1-283ENST00000640523 ZNF326Q5BKZ1 582 aaKnown RBP31.67■■■□□ 2.66
KCNMA1-283ENST00000640523 ZBTB47Q9UFB7 747 aaPredicted RBP31.62■■■□□ 2.65
KCNMA1-283ENST00000640523 NPM2Q86SE8 214 aaKnown RBP31.62■■■□□ 2.65
KCNMA1-283ENST00000640523 CANXP27824 592 aaKnown RBP31.55■■■□□ 2.64
KCNMA1-283ENST00000640523 CSRNP3Q8WYN3 585 aa31.49■■■□□ 2.63
KCNMA1-283ENST00000640523 HNRNPUQ00839 825 aaKnown RBP eCLIP31.42■■■□□ 2.62
KCNMA1-283ENST00000640523 GLIPR1L2Q4G1C9 344 aa31.41■■■□□ 2.62
KCNMA1-283ENST00000640523 PABPN1Q86U42 306 aaKnown RBP eCLIP31.33■■■□□ 2.61
KCNMA1-283ENST00000640523 BCL11AQ9H165 835 aa31.33■■■□□ 2.61
KCNMA1-283ENST00000640523 DDX10Q13206 875 aaKnown RBP31.32■■■□□ 2.6
KCNMA1-283ENST00000640523 ANP32BQ92688 251 aaKnown RBP31.32■■■□□ 2.6
KCNMA1-283ENST00000640523 NBR1Q14596 966 aa31.27■■■□□ 2.6
KCNMA1-283ENST00000640523 MIER1Q8N108 512 aa31.23■■■□□ 2.59
KCNMA1-283ENST00000640523 TONSLQ96HA7 1378 aa31.22■■■□□ 2.59
KCNMA1-283ENST00000640523 SLC24A1O60721 1099 aa31.19■■■□□ 2.58
KCNMA1-283ENST00000640523 CCDC136Q96JN2 1154 aa31.19■■■□□ 2.58
KCNMA1-283ENST00000640523 FAM9BQ8IZU0 186 aa31.17■■■□□ 2.58
KCNMA1-283ENST00000640523 UPF2Q9HAU5 1272 aaKnown RBP31.16■■■□□ 2.58
KCNMA1-283ENST00000640523 FBLN2P98095 1184 aa31.15■■■□□ 2.58
KCNMA1-283ENST00000640523 NEFMP07197 916 aa31.14■■■□□ 2.58
KCNMA1-283ENST00000640523 HSP90AA1P07900 732 aaKnown RBP31.09■■■□□ 2.57
KCNMA1-283ENST00000640523 ANP32EQ9BTT0 268 aa31.09■■■□□ 2.57
KCNMA1-283ENST00000640523 P3H3Q8IVL6 736 aa31.06■■■□□ 2.56
KCNMA1-283ENST00000640523 ARID3CA6NKF2 412 aa31.05■■■□□ 2.56
KCNMA1-283ENST00000640523 ABCC9O60706 1549 aa30.98■■■□□ 2.55
KCNMA1-283ENST00000640523 TMC1Q8TDI8 760 aa30.9■■■□□ 2.54
KCNMA1-283ENST00000640523 MRS2Q9HD23 443 aa30.89■■■□□ 2.54
KCNMA1-283ENST00000640523 ZNF777Q9ULD5 760 aaPredicted RBP30.87■■■□□ 2.53
KCNMA1-283ENST00000640523 IRX6P78412 446 aaPredicted RBP30.87■■■□□ 2.53
KCNMA1-283ENST00000640523 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.86■■■□□ 2.53
KCNMA1-283ENST00000640523 SALL2Q9Y467 1007 aaPredicted RBP30.84■■■□□ 2.53
KCNMA1-283ENST00000640523 ARXQ96QS3 562 aa30.76■■■□□ 2.51
KCNMA1-283ENST00000640523 DDRGK1Q96HY6 314 aa30.71■■■□□ 2.51
KCNMA1-283ENST00000640523 HIRIP3Q9BW71 556 aaPredicted RBP30.58■■■□□ 2.49
KCNMA1-283ENST00000640523 WDR43Q15061 677 aaKnown RBP eCLIP30.58■■■□□ 2.49
KCNMA1-283ENST00000640523 MYO15BQ96JP2 1530 aa30.57■■■□□ 2.49
KCNMA1-283ENST00000640523 BECN1Q14457 450 aa30.55■■■□□ 2.48
KCNMA1-283ENST00000640523 EIF4G2P78344 907 aaKnown RBP eCLIP30.54■■■□□ 2.48
KCNMA1-283ENST00000640523 CCDC180Q9P1Z9 1646 aa30.53■■■□□ 2.48
KCNMA1-283ENST00000640523 PPM1GO15355 546 aaPredicted RBP30.52■■■□□ 2.48
KCNMA1-283ENST00000640523 CHGAP10645 457 aaKnown RBP30.52■■■□□ 2.48
KCNMA1-283ENST00000640523 TRIM44Q96DX7 344 aaPredicted RBP30.5■■■□□ 2.47
KCNMA1-283ENST00000640523 SUPT16HQ9Y5B9 1047 aaKnown RBP30.49■■■□□ 2.47
KCNMA1-283ENST00000640523 CHIC2Q9UKJ5 165 aa30.47■■■□□ 2.47
KCNMA1-283ENST00000640523 ERICH6BQ5W0A0 696 aa30.46■■■□□ 2.47
KCNMA1-283ENST00000640523 CLIP1P30622 1438 aa30.42■■■□□ 2.46
KCNMA1-283ENST00000640523 PPP4R2Q9NY27 417 aa30.4■■■□□ 2.46
KCNMA1-283ENST00000640523 ESF1Q9H501 851 aaKnown RBP30.39■■■□□ 2.46
KCNMA1-283ENST00000640523 STAG3Q9UJ98 1225 aa30.38■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms