RNA–Protein interactions for RNA: ENST00000292330.2

PPP1R35-201, Transcript of protein phosphatase 1 regulatory subunit 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP1R35, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R35-201ENST00000292330 NISCHQ9Y2I1 1504 aa66.44■■■■■ 8.23
PPP1R35-201ENST00000292330 ABCC9O60706 1549 aa59.6■■■■■ 7.13
PPP1R35-201ENST00000292330 CCDC180Q9P1Z9 1646 aa59.52■■■■■ 7.12
PPP1R35-201ENST00000292330 RB1CC1Q8TDY2 1594 aa56.69■■■■■ 6.67
PPP1R35-201ENST00000292330 DCAF8L2P0C7V8 631 aa56.3■■■■■ 6.6
PPP1R35-201ENST00000292330 NACADO15069 1562 aa56.29■■■■■ 6.6
PPP1R35-201ENST00000292330 DNAJC5BQ9UF47 199 aa55.84■■■■■ 6.53
PPP1R35-201ENST00000292330 PABPN1Q86U42 306 aaKnown RBP eCLIP55.57■■■■■ 6.497e-6■□□□□ 10.4
PPP1R35-201ENST00000292330 MYO15BQ96JP2 1530 aa55.47■■■■■ 6.47
PPP1R35-201ENST00000292330 UNC13AQ9UPW8 1703 aa55.37■■■■■ 6.45
PPP1R35-201ENST00000292330 ZCCHC6Q5VYS8 1495 aaKnown RBP55.06■■■■■ 6.41
PPP1R35-201ENST00000292330 BICRAQ9NZM4 1560 aa55.01■■■■■ 6.4
PPP1R35-201ENST00000292330 DCAF1Q9Y4B6 1507 aa54.81■■■■■ 6.37
PPP1R35-201ENST00000292330 SCRIBQ14160 1630 aa54.37■■■■■ 6.29
PPP1R35-201ENST00000292330 SHROOM4Q9ULL8 1493 aa54.21■■■■■ 6.27
PPP1R35-201ENST00000292330 CC2D2AQ9P2K1 1620 aa53.78■■■■■ 6.2
PPP1R35-201ENST00000292330 EIF4G1Q04637 1599 aaKnown RBP53.68■■■■■ 6.18
PPP1R35-201ENST00000292330 CECR2Q9BXF3 1484 aa53.65■■■■■ 6.18
PPP1R35-201ENST00000292330 NCAPD3P42695 1498 aa51.98■■■■■ 5.91
PPP1R35-201ENST00000292330 ATAD2BQ9ULI0 1458 aa51.86■■■■■ 5.89
PPP1R35-201ENST00000292330 SMARCA4P51532 1647 aa51.81■■■■■ 5.88
PPP1R35-201ENST00000292330 SMARCA2P51531 1590 aa51.71■■■■■ 5.87
PPP1R35-201ENST00000292330 HMGXB3Q12766 1538 aa51.58■■■■■ 5.85
PPP1R35-201ENST00000292330 BAZ1AQ9NRL2 1556 aaPredicted RBP51.57■■■■■ 5.85
PPP1R35-201ENST00000292330 ERCC6Q03468 1493 aa51.48■■■■■ 5.83
PPP1R35-201ENST00000292330 BAZ1BQ9UIG0 1483 aaKnown RBP51.4■■■■■ 5.82
PPP1R35-201ENST00000292330 CUX2O14529 1486 aa51.25■■■■■ 5.79
PPP1R35-201ENST00000292330 PEG3Q9GZU2 1588 aa51.24■■■■■ 5.79
PPP1R35-201ENST00000292330 MROH2BQ7Z745 1585 aa51.23■■■■■ 5.79
PPP1R35-201ENST00000292330 NESP48681 1621 aa51.2■■■■■ 5.79
PPP1R35-201ENST00000292330 DNAJC5Q9H3Z4 198 aa51.2■■■■■ 5.79
PPP1R35-201ENST00000292330 LAMC3Q9Y6N6 1575 aa50.8■■■■■ 5.72
PPP1R35-201ENST00000292330 WIZO95785 1651 aa50.62■■■■■ 5.69
PPP1R35-201ENST00000292330 THOC2Q8NI27 1593 aaKnown RBP50.58■■■■■ 5.69
PPP1R35-201ENST00000292330 PDS5BQ9NTI5 1447 aa50.56■■■■■ 5.68
PPP1R35-201ENST00000292330 KIF21AQ7Z4S6 1674 aa50.5■■■■■ 5.67
PPP1R35-201ENST00000292330 CADPSQ9ULU8 1353 aa50.45■■■■■ 5.67
PPP1R35-201ENST00000292330 RSF1Q96T23 1441 aaPredicted RBP50.2■■■■■ 5.63
PPP1R35-201ENST00000292330 MRC2Q9UBG0 1479 aa50.09■■■■■ 5.61
PPP1R35-201ENST00000292330 TOP2AP11388 1531 aaKnown RBP49.95■■■■■ 5.59
PPP1R35-201ENST00000292330 CEP164Q9UPV0 1460 aa49.94■■■■■ 5.58
PPP1R35-201ENST00000292330 WDR62O43379 1518 aa49.92■■■■■ 5.58
PPP1R35-201ENST00000292330 FANCD2Q9BXW9 1451 aa49.88■■■■■ 5.58
PPP1R35-201ENST00000292330 CFTRP13569 1480 aa49.86■■■■■ 5.57
PPP1R35-201ENST00000292330 URB2Q14146 1524 aaKnown RBP49.45■■■■■ 5.51
PPP1R35-201ENST00000292330 CCDC88BA6NC98 1476 aa49.44■■■■■ 5.5
PPP1R35-201ENST00000292330 PRDM2Q13029 1718 aa49.31■■■■■ 5.48
PPP1R35-201ENST00000292330 TRIM41Q8WV44 630 aa49.12■■■■■ 5.45
PPP1R35-201ENST00000292330 OSCARQ8IYS5 282 aa49.03■■■■■ 5.44
PPP1R35-201ENST00000292330 TOPBP1Q92547 1522 aa48.93■■■■■ 5.42
PPP1R35-201ENST00000292330 IFT140Q96RY7 1462 aa48.91■■■■■ 5.42
PPP1R35-201ENST00000292330 ZNF608Q9ULD9 1512 aaPredicted RBP48.85■■■■■ 5.41
PPP1R35-201ENST00000292330 ABCC8Q09428 1581 aa48.81■■■■■ 5.4
PPP1R35-201ENST00000292330 DNMBPQ6XZF7 1577 aa48.74■■■■■ 5.39
PPP1R35-201ENST00000292330 EIF4G3O43432 1585 aaKnown RBP48.55■■■■■ 5.36
PPP1R35-201ENST00000292330 TARBP1Q13395 1621 aaKnown RBP48.46■■■■■ 5.35
PPP1R35-201ENST00000292330 AQRO60306 1485 aaKnown RBP eCLIP48.45■■■■■ 5.356e-9■■■□□ 15
PPP1R35-201ENST00000292330 POLA1P09884 1462 aaPredicted RBP48.43■■■■■ 5.34
PPP1R35-201ENST00000292330 RAD54L2Q9Y4B4 1467 aa48.31■■■■■ 5.32
PPP1R35-201ENST00000292330 RIMBP3CA6NJZ7 1639 aa48.31■■■■■ 5.32
PPP1R35-201ENST00000292330 RIMBP3BA6NNM3 1639 aa48.31■■■■■ 5.32
PPP1R35-201ENST00000292330 RIMBP3Q9UFD9 1639 aa48.31■■■■■ 5.32
PPP1R35-201ENST00000292330 SOGA1O94964 1423 aa48.27■■■■■ 5.32
PPP1R35-201ENST00000292330 FBLN2P98095 1184 aa48.23■■■■■ 5.31
PPP1R35-201ENST00000292330 SUPT5HO00267 1087 aaKnown RBP48.22■■■■■ 5.31
PPP1R35-201ENST00000292330 TDRD9Q8NDG6 1382 aaKnown RBP48.19■■■■■ 5.31
PPP1R35-201ENST00000292330 CHD1O14646 1710 aa48.18■■■■■ 5.3
PPP1R35-201ENST00000292330 ARHGEF11O15085 1522 aa48.17■■■■■ 5.3
PPP1R35-201ENST00000292330 FGD5Q6ZNL6 1462 aa48.16■■■■■ 5.3
PPP1R35-201ENST00000292330 CUX1P39880 1505 aa48.12■■■■■ 5.29
PPP1R35-201ENST00000292330 SNAPC4Q5SXM2 1469 aa47.94■■■■■ 5.26
PPP1R35-201ENST00000292330 CYB5RLQ6IPT4 315 aa47.93■■■■■ 5.26
PPP1R35-201ENST00000292330 WDR97A6NE52 1622 aa47.92■■■■■ 5.26
PPP1R35-201ENST00000292330 CHMP7Q8WUX9 453 aaPredicted RBP47.84■■■■■ 5.25
PPP1R35-201ENST00000292330 GRIN2BQ13224 1484 aa47.81■■■■■ 5.24
PPP1R35-201ENST00000292330 MAGI1Q96QZ7 1491 aaPredicted RBP47.78■■■■■ 5.24
PPP1R35-201ENST00000292330 ARAP1Q96P48 1450 aa47.71■■■■■ 5.23
PPP1R35-201ENST00000292330 GAPVD1Q14C86 1478 aa47.66■■■■■ 5.22
PPP1R35-201ENST00000292330 SYNJ2O15056 1496 aa47.63■■■■■ 5.22
PPP1R35-201ENST00000292330 SYNJ1O43426 1573 aa47.62■■■■■ 5.21
PPP1R35-201ENST00000292330 CLASP1Q7Z460 1538 aa47.6■■■■■ 5.21
PPP1R35-201ENST00000292330 PBRM1Q86U86 1689 aa47.59■■■■■ 5.21
PPP1R35-201ENST00000292330 ABCA10Q8WWZ4 1543 aa47.59■■■■■ 5.21
PPP1R35-201ENST00000292330 ABCA5Q8WWZ7 1642 aa47.48■■■■■ 5.19
PPP1R35-201ENST00000292330 WRNQ14191 1432 aaPredicted RBP eCLIP47.47■■■■■ 5.19
PPP1R35-201ENST00000292330 TRHP20396 242 aaPredicted RBP47.42■■■■■ 5.18
PPP1R35-201ENST00000292330 TOP2BQ02880 1626 aa47.34■■■■■ 5.17
PPP1R35-201ENST00000292330 BIVM-ERCC5R4GMW8 1640 aa47.33■■■■■ 5.17
PPP1R35-201ENST00000292330 GRIN2AQ12879 1464 aa47.19■■■■■ 5.14
PPP1R35-201ENST00000292330 ADAMTS12P58397 1594 aa47.14■■■■■ 5.14
PPP1R35-201ENST00000292330 FHAD1B1AJZ9 1412 aa47.05■■■■■ 5.12
PPP1R35-201ENST00000292330 CEP170Q5SW79 1584 aa47■■■■■ 5.11
PPP1R35-201ENST00000292330 NUP160Q12769 1436 aa46.99■■■■■ 5.11
PPP1R35-201ENST00000292330 ERICH3Q5RHP9 1530 aa46.99■■■■■ 5.11
PPP1R35-201ENST00000292330 ERCC6L2Q5T890 1561 aa46.92■■■■■ 5.1
PPP1R35-201ENST00000292330 SHROOM2Q13796 1616 aa46.74■■■■■ 5.07
PPP1R35-201ENST00000292330 PRG4Q92954 1404 aaPredicted RBP46.62■■■■■ 5.05
PPP1R35-201ENST00000292330 JPH4Q96JJ6 628 aa46.61■■■■■ 5.05
PPP1R35-201ENST00000292330 KIF27Q86VH2 1401 aa46.49■■■■■ 5.03
PPP1R35-201ENST00000292330 RUSC2Q8N2Y8 1516 aa46.47■■■■■ 5.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms