RNA–Protein interactions for RNA: ENST00000565809.5

RPUSD1-207, Transcript of RNA pseudouridylate synthase domain containing 1, humanhuman

TSL 2 BASIC

Gene RPUSD1, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1-207ENST00000565809 NISCHQ9Y2I1 1504 aa52.83■■■■■ 6.05
RPUSD1-207ENST00000565809 CCDC180Q9P1Z9 1646 aa46.26■■■■■ 5
RPUSD1-207ENST00000565809 ZCCHC6Q5VYS8 1495 aaKnown RBP44.46■■■■■ 4.71
RPUSD1-207ENST00000565809 ABCC9O60706 1549 aa44.18■■■■■ 4.66
RPUSD1-207ENST00000565809 SHROOM4Q9ULL8 1493 aa43.88■■■■■ 4.62
RPUSD1-207ENST00000565809 DCAF8L2P0C7V8 631 aa43.83■■■■■ 4.61
RPUSD1-207ENST00000565809 DCAF1Q9Y4B6 1507 aa43.67■■■■■ 4.58
RPUSD1-207ENST00000565809 MYO15BQ96JP2 1530 aa43.33■■■■■ 4.53
RPUSD1-207ENST00000565809 NACADO15069 1562 aa43.21■■■■■ 4.51
RPUSD1-207ENST00000565809 RB1CC1Q8TDY2 1594 aa42.95■■■■■ 4.47
RPUSD1-207ENST00000565809 SUPT5HO00267 1087 aaKnown RBP42.89■■■■■ 4.46
RPUSD1-207ENST00000565809 SCRIBQ14160 1630 aa42.5■■■■■ 4.39
RPUSD1-207ENST00000565809 UNC13AQ9UPW8 1703 aa42.05■■■■■ 4.32
RPUSD1-207ENST00000565809 CHIC1Q5VXU3 224 aa41.69■■■■■ 4.27
RPUSD1-207ENST00000565809 BICRAQ9NZM4 1560 aa41.65■■■■■ 4.26
RPUSD1-207ENST00000565809 PABPN1Q86U42 306 aaKnown RBP eCLIP41.59■■■■■ 4.25
RPUSD1-207ENST00000565809 RSF1Q96T23 1441 aaPredicted RBP41.32■■■■■ 4.21
RPUSD1-207ENST00000565809 CECR2Q9BXF3 1484 aa41.1■■■■■ 4.17
RPUSD1-207ENST00000565809 BAZ1AQ9NRL2 1556 aaPredicted RBP40.83■■■■■ 4.13
RPUSD1-207ENST00000565809 MROH2BQ7Z745 1585 aa40.8■■■■■ 4.12
RPUSD1-207ENST00000565809 SMARCA4P51532 1647 aa40.7■■■■■ 4.11
RPUSD1-207ENST00000565809 WIZO95785 1651 aa40.47■■■■■ 4.07
RPUSD1-207ENST00000565809 EIF4G1Q04637 1599 aaKnown RBP40.45■■■■■ 4.07
RPUSD1-207ENST00000565809 TRIM41Q8WV44 630 aa40.22■■■■■ 4.03
RPUSD1-207ENST00000565809 PEG3Q9GZU2 1588 aa40.22■■■■■ 4.03
RPUSD1-207ENST00000565809 LOC105371045A0A1W2PR82 267 aa40.16■■■■■ 4.02
RPUSD1-207ENST00000565809 ATAD2BQ9ULI0 1458 aa40.16■■■■■ 4.02
RPUSD1-207ENST00000565809 SMARCA2P51531 1590 aa40.12■■■■■ 4.01
RPUSD1-207ENST00000565809 TOP2AP11388 1531 aaKnown RBP40.06■■■■■ 4
RPUSD1-207ENST00000565809 CC2D2AQ9P2K1 1620 aa39.97■■■■□ 3.99
RPUSD1-207ENST00000565809 BAZ1BQ9UIG0 1483 aaKnown RBP39.91■■■■□ 3.98
RPUSD1-207ENST00000565809 NCAPD3P42695 1498 aa39.89■■■■□ 3.98
RPUSD1-207ENST00000565809 HMGXB3Q12766 1538 aa39.78■■■■□ 3.96
RPUSD1-207ENST00000565809 PCGF6Q9BYE7 350 aa39.72■■■■□ 3.95
RPUSD1-207ENST00000565809 CCDC88BA6NC98 1476 aa39.69■■■■□ 3.94
RPUSD1-207ENST00000565809 HRCP23327 699 aa39.61■■■■□ 3.93
RPUSD1-207ENST00000565809 FAM9AQ8IZU1 332 aaPredicted RBP39.53■■■■□ 3.92
RPUSD1-207ENST00000565809 TRIM26Q12899 539 aaPredicted RBP39.4■■■■□ 3.9
RPUSD1-207ENST00000565809 DNAJC5BQ9UF47 199 aa39.39■■■■□ 3.9
RPUSD1-207ENST00000565809 ABCC8Q09428 1581 aa39.28■■■■□ 3.88
RPUSD1-207ENST00000565809 EEA1Q15075 1411 aa39.01■■■■□ 3.84
RPUSD1-207ENST00000565809 EHMT2Q96KQ7 1210 aa38.94■■■■□ 3.82
RPUSD1-207ENST00000565809 CFTRP13569 1480 aa38.88■■■■□ 3.81
RPUSD1-207ENST00000565809 WRNQ14191 1432 aaPredicted RBP eCLIP38.88■■■■□ 3.81
RPUSD1-207ENST00000565809 CADPSQ9ULU8 1353 aa38.85■■■■□ 3.81
RPUSD1-207ENST00000565809 SOGA1O94964 1423 aa38.8■■■■□ 3.8
RPUSD1-207ENST00000565809 CSRNP3Q8WYN3 585 aa38.67■■■■□ 3.78
RPUSD1-207ENST00000565809 SYNJ1O43426 1573 aa38.65■■■■□ 3.78
RPUSD1-207ENST00000565809 TNIKQ9UKE5 1360 aa38.65■■■■□ 3.78
RPUSD1-207ENST00000565809 NESP48681 1621 aa38.65■■■■□ 3.78
RPUSD1-207ENST00000565809 PRDM2Q13029 1718 aa38.63■■■■□ 3.77
RPUSD1-207ENST00000565809 LAMC3Q9Y6N6 1575 aa38.6■■■■□ 3.77
RPUSD1-207ENST00000565809 RUSC2Q8N2Y8 1516 aa38.57■■■■□ 3.76
RPUSD1-207ENST00000565809 CEP162Q5TB80 1403 aa38.54■■■■□ 3.76
RPUSD1-207ENST00000565809 ZEB1P37275 1124 aaPredicted RBP38.53■■■■□ 3.76
RPUSD1-207ENST00000565809 GOLGA3Q08378 1498 aa38.53■■■■□ 3.76
RPUSD1-207ENST00000565809 PPARGC1BQ86YN6 1023 aaKnown RBP38.46■■■■□ 3.75
RPUSD1-207ENST00000565809 KIF21BO75037 1637 aa38.43■■■■□ 3.74
RPUSD1-207ENST00000565809 FANCD2Q9BXW9 1451 aa38.41■■■■□ 3.74
RPUSD1-207ENST00000565809 TOP2BQ02880 1626 aa38.4■■■■□ 3.74
RPUSD1-207ENST00000565809 CEP164Q9UPV0 1460 aa38.4■■■■□ 3.74
RPUSD1-207ENST00000565809 BIVM-ERCC5R4GMW8 1640 aa38.34■■■■□ 3.73
RPUSD1-207ENST00000565809 PDS5BQ9NTI5 1447 aa38.33■■■■□ 3.73
RPUSD1-207ENST00000565809 UBTFP17480 764 aaKnown RBP38.33■■■■□ 3.73
RPUSD1-207ENST00000565809 CUX1P39880 1505 aa38.18■■■■□ 3.7
RPUSD1-207ENST00000565809 KIF21AQ7Z4S6 1674 aa38.16■■■■□ 3.7
RPUSD1-207ENST00000565809 DNMBPQ6XZF7 1577 aa37.97■■■■□ 3.67
RPUSD1-207ENST00000565809 RAPGEF2Q9Y4G8 1499 aa37.96■■■■□ 3.67
RPUSD1-207ENST00000565809 CLIP1P30622 1438 aa37.96■■■■□ 3.67
RPUSD1-207ENST00000565809 URB2Q14146 1524 aaKnown RBP37.95■■■■□ 3.67
RPUSD1-207ENST00000565809 TOPBP1Q92547 1522 aa37.94■■■■□ 3.66
RPUSD1-207ENST00000565809 ERCC6Q03468 1493 aa37.94■■■■□ 3.66
RPUSD1-207ENST00000565809 ERICH3Q5RHP9 1530 aa37.93■■■■□ 3.66
RPUSD1-207ENST00000565809 MRC2Q9UBG0 1479 aa37.86■■■■□ 3.65
RPUSD1-207ENST00000565809 FGD5Q6ZNL6 1462 aa37.84■■■■□ 3.65
RPUSD1-207ENST00000565809 PRXQ9BXM0 1461 aa37.83■■■■□ 3.65
RPUSD1-207ENST00000565809 VPS8Q8N3P4 1428 aa37.81■■■■□ 3.64
RPUSD1-207ENST00000565809 KIF27Q86VH2 1401 aa37.79■■■■□ 3.64
RPUSD1-207ENST00000565809 POLA1P09884 1462 aaPredicted RBP37.73■■■■□ 3.63
RPUSD1-207ENST00000565809 WDR62O43379 1518 aa37.67■■■■□ 3.62
RPUSD1-207ENST00000565809 THOC2Q8NI27 1593 aaKnown RBP37.66■■■■□ 3.62
RPUSD1-207ENST00000565809 CCER1Q8TC90 406 aaPredicted RBP37.64■■■■□ 3.62
RPUSD1-207ENST00000565809 TTBK1Q5TCY1 1321 aaPredicted RBP37.64■■■■□ 3.62
RPUSD1-207ENST00000565809 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.61■■■■□ 3.61
RPUSD1-207ENST00000565809 RAD54L2Q9Y4B4 1467 aa37.6■■■■□ 3.61
RPUSD1-207ENST00000565809 APLP2Q06481 763 aa37.54■■■■□ 3.6
RPUSD1-207ENST00000565809 CUX2O14529 1486 aa37.52■■■■□ 3.6
RPUSD1-207ENST00000565809 ABCA10Q8WWZ4 1543 aa37.49■■■■□ 3.59
RPUSD1-207ENST00000565809 TARBP1Q13395 1621 aaKnown RBP37.4■■■■□ 3.58
RPUSD1-207ENST00000565809 ARAP1Q96P48 1450 aa37.39■■■■□ 3.58
RPUSD1-207ENST00000565809 WDR97A6NE52 1622 aa37.39■■■■□ 3.58
RPUSD1-207ENST00000565809 IFT140Q96RY7 1462 aa37.33■■■■□ 3.57
RPUSD1-207ENST00000565809 RANGAP1P46060 587 aaPredicted RBP37.32■■■■□ 3.56
RPUSD1-207ENST00000565809 IGF1RP08069 1367 aa37.3■■■■□ 3.56
RPUSD1-207ENST00000565809 TDRD9Q8NDG6 1382 aaKnown RBP37.29■■■■□ 3.56
RPUSD1-207ENST00000565809 ABCA5Q8WWZ7 1642 aa37.21■■■■□ 3.55
RPUSD1-207ENST00000565809 GAPVD1Q14C86 1478 aa37.18■■■■□ 3.54
RPUSD1-207ENST00000565809 ARHGAP35Q9NRY4 1499 aa37.16■■■■□ 3.54
RPUSD1-207ENST00000565809 CARMIL1Q5VZK9 1371 aa37.16■■■■□ 3.54
RPUSD1-207ENST00000565809 ZNF608Q9ULD9 1512 aaPredicted RBP37.15■■■■□ 3.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms