RNA–Protein interactions for RNA: ENST00000380025.8

NDEL1-202, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5 BASIC

Gene NDEL1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-202ENST00000380025 NISCHQ9Y2I1 1504 aa54.63■■■■■ 6.34
NDEL1-202ENST00000380025 CCDC180Q9P1Z9 1646 aa47.15■■■■■ 5.14
NDEL1-202ENST00000380025 ZCCHC6Q5VYS8 1495 aaKnown RBP46.08■■■■■ 4.97
NDEL1-202ENST00000380025 SHROOM4Q9ULL8 1493 aa45.38■■■■■ 4.85
NDEL1-202ENST00000380025 DCAF1Q9Y4B6 1507 aa45.07■■■■■ 4.8
NDEL1-202ENST00000380025 DCAF8L2P0C7V8 631 aa44.96■■■■■ 4.79
NDEL1-202ENST00000380025 MYO15BQ96JP2 1530 aa44.17■■■■■ 4.66
NDEL1-202ENST00000380025 SUPT5HO00267 1087 aaKnown RBP44.05■■■■■ 4.64
NDEL1-202ENST00000380025 ABCC9O60706 1549 aa43.98■■■■■ 4.63
NDEL1-202ENST00000380025 NACADO15069 1562 aa43.7■■■■■ 4.59
NDEL1-202ENST00000380025 SCRIBQ14160 1630 aa43.66■■■■■ 4.58
NDEL1-202ENST00000380025 RB1CC1Q8TDY2 1594 aa43.15■■■■■ 4.5
NDEL1-202ENST00000380025 RSF1Q96T23 1441 aaPredicted RBP42.76■■■■■ 4.44
NDEL1-202ENST00000380025 CHIC1Q5VXU3 224 aa42.58■■■■■ 4.41
NDEL1-202ENST00000380025 CECR2Q9BXF3 1484 aa42.49■■■■■ 4.39
NDEL1-202ENST00000380025 UNC13AQ9UPW8 1703 aa42.47■■■■■ 4.39
NDEL1-202ENST00000380025 MROH2BQ7Z745 1585 aa42.32■■■■■ 4.37
NDEL1-202ENST00000380025 BAZ1AQ9NRL2 1556 aaPredicted RBP42.08■■■■■ 4.33
NDEL1-202ENST00000380025 WIZO95785 1651 aa42.05■■■■■ 4.32
NDEL1-202ENST00000380025 BICRAQ9NZM4 1560 aa41.95■■■■■ 4.31
NDEL1-202ENST00000380025 SMARCA4P51532 1647 aa41.84■■■■■ 4.29
NDEL1-202ENST00000380025 PABPN1Q86U42 306 aaKnown RBP eCLIP41.7■■■■■ 4.27
NDEL1-202ENST00000380025 TOP2AP11388 1531 aaKnown RBP41.53■■■■■ 4.24
NDEL1-202ENST00000380025 EIF4G1Q04637 1599 aaKnown RBP41.27■■■■■ 4.2
NDEL1-202ENST00000380025 TRIM41Q8WV44 630 aa41.25■■■■■ 4.19
NDEL1-202ENST00000380025 PEG3Q9GZU2 1588 aa41.22■■■■■ 4.19
NDEL1-202ENST00000380025 SMARCA2P51531 1590 aa41.22■■■■■ 4.19
NDEL1-202ENST00000380025 CCDC88BA6NC98 1476 aa41.18■■■■■ 4.18
NDEL1-202ENST00000380025 LOC105371045A0A1W2PR82 267 aa41.08■■■■■ 4.17
NDEL1-202ENST00000380025 ATAD2BQ9ULI0 1458 aa40.92■■■■■ 4.14
NDEL1-202ENST00000380025 BAZ1BQ9UIG0 1483 aaKnown RBP40.73■■■■■ 4.11
NDEL1-202ENST00000380025 ABCC8Q09428 1581 aa40.68■■■■■ 4.1
NDEL1-202ENST00000380025 FAM9AQ8IZU1 332 aaPredicted RBP40.65■■■■■ 4.1
NDEL1-202ENST00000380025 HMGXB3Q12766 1538 aa40.38■■■■■ 4.05
NDEL1-202ENST00000380025 NCAPD3P42695 1498 aa40.36■■■■■ 4.05
NDEL1-202ENST00000380025 WRNQ14191 1432 aaPredicted RBP eCLIP40.2■■■■■ 4.03
NDEL1-202ENST00000380025 EHMT2Q96KQ7 1210 aa40.14■■■■■ 4.02
NDEL1-202ENST00000380025 PCGF6Q9BYE7 350 aa40.08■■■■■ 4.01
NDEL1-202ENST00000380025 SOGA1O94964 1423 aa40.07■■■■■ 4.01
NDEL1-202ENST00000380025 SYNJ1O43426 1573 aa40.07■■■■■ 4.01
NDEL1-202ENST00000380025 EEA1Q15075 1411 aa39.98■■■■□ 3.99
NDEL1-202ENST00000380025 RUSC2Q8N2Y8 1516 aa39.91■■■■□ 3.98
NDEL1-202ENST00000380025 CC2D2AQ9P2K1 1620 aa39.79■■■■□ 3.96
NDEL1-202ENST00000380025 CSRNP3Q8WYN3 585 aa39.77■■■■□ 3.96
NDEL1-202ENST00000380025 TOP2BQ02880 1626 aa39.77■■■■□ 3.96
NDEL1-202ENST00000380025 TRIM26Q12899 539 aaPredicted RBP39.76■■■■□ 3.95
NDEL1-202ENST00000380025 CFTRP13569 1480 aa39.74■■■■□ 3.95
NDEL1-202ENST00000380025 BIVM-ERCC5R4GMW8 1640 aa39.71■■■■□ 3.95
NDEL1-202ENST00000380025 PRDM2Q13029 1718 aa39.59■■■■□ 3.93
NDEL1-202ENST00000380025 HRCP23327 699 aa39.59■■■■□ 3.93
NDEL1-202ENST00000380025 TNIKQ9UKE5 1360 aa39.59■■■■□ 3.93
NDEL1-202ENST00000380025 GOLGA3Q08378 1498 aa39.55■■■■□ 3.92
NDEL1-202ENST00000380025 CEP162Q5TB80 1403 aa39.51■■■■□ 3.91
NDEL1-202ENST00000380025 KIF21BO75037 1637 aa39.5■■■■□ 3.91
NDEL1-202ENST00000380025 CUX1P39880 1505 aa39.5■■■■□ 3.91
NDEL1-202ENST00000380025 CEP164Q9UPV0 1460 aa39.45■■■■□ 3.91
NDEL1-202ENST00000380025 CADPSQ9ULU8 1353 aa39.41■■■■□ 3.9
NDEL1-202ENST00000380025 UBTFP17480 764 aaKnown RBP39.38■■■■□ 3.89
NDEL1-202ENST00000380025 RAPGEF2Q9Y4G8 1499 aa39.2■■■■□ 3.87
NDEL1-202ENST00000380025 PPARGC1BQ86YN6 1023 aaKnown RBP39.13■■■■□ 3.85
NDEL1-202ENST00000380025 KIF27Q86VH2 1401 aa39.06■■■■□ 3.84
NDEL1-202ENST00000380025 PRXQ9BXM0 1461 aa39.06■■■■□ 3.84
NDEL1-202ENST00000380025 ERICH3Q5RHP9 1530 aa39.05■■■■□ 3.84
NDEL1-202ENST00000380025 FANCD2Q9BXW9 1451 aa39.02■■■■□ 3.84
NDEL1-202ENST00000380025 CLIP1P30622 1438 aa38.98■■■■□ 3.83
NDEL1-202ENST00000380025 NESP48681 1621 aa38.93■■■■□ 3.82
NDEL1-202ENST00000380025 FGD5Q6ZNL6 1462 aa38.92■■■■□ 3.82
NDEL1-202ENST00000380025 LAMC3Q9Y6N6 1575 aa38.84■■■■□ 3.81
NDEL1-202ENST00000380025 CUX2O14529 1486 aa38.83■■■■□ 3.81
NDEL1-202ENST00000380025 DNMBPQ6XZF7 1577 aa38.8■■■■□ 3.8
NDEL1-202ENST00000380025 VPS8Q8N3P4 1428 aa38.75■■■■□ 3.79
NDEL1-202ENST00000380025 TOPBP1Q92547 1522 aa38.71■■■■□ 3.79
NDEL1-202ENST00000380025 DNAJC5BQ9UF47 199 aa38.68■■■■□ 3.78
NDEL1-202ENST00000380025 IGF1RP08069 1367 aa38.68■■■■□ 3.78
NDEL1-202ENST00000380025 TTBK1Q5TCY1 1321 aaPredicted RBP38.65■■■■□ 3.78
NDEL1-202ENST00000380025 RANGAP1P46060 587 aaPredicted RBP38.61■■■■□ 3.77
NDEL1-202ENST00000380025 POLA1P09884 1462 aaPredicted RBP38.6■■■■□ 3.77
NDEL1-202ENST00000380025 ABCA10Q8WWZ4 1543 aa38.54■■■■□ 3.76
NDEL1-202ENST00000380025 RAD54L2Q9Y4B4 1467 aa38.54■■■■□ 3.76
NDEL1-202ENST00000380025 URB2Q14146 1524 aaKnown RBP38.53■■■■□ 3.76
NDEL1-202ENST00000380025 ARAP1Q96P48 1450 aa38.53■■■■□ 3.76
NDEL1-202ENST00000380025 ZEB1P37275 1124 aaPredicted RBP38.52■■■■□ 3.76
NDEL1-202ENST00000380025 PDS5BQ9NTI5 1447 aa38.5■■■■□ 3.75
NDEL1-202ENST00000380025 CARMIL1Q5VZK9 1371 aa38.48■■■■□ 3.75
NDEL1-202ENST00000380025 KIF21AQ7Z4S6 1674 aa38.43■■■■□ 3.74
NDEL1-202ENST00000380025 WDR97A6NE52 1622 aa38.38■■■■□ 3.73
NDEL1-202ENST00000380025 ARHGAP35Q9NRY4 1499 aa38.35■■■■□ 3.73
NDEL1-202ENST00000380025 APLP2Q06481 763 aa38.33■■■■□ 3.73
NDEL1-202ENST00000380025 CUL7Q14999 1698 aa38.25■■■■□ 3.71
NDEL1-202ENST00000380025 ABCA5Q8WWZ7 1642 aa38.19■■■■□ 3.7
NDEL1-202ENST00000380025 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.19■■■■□ 3.7
NDEL1-202ENST00000380025 CCER1Q8TC90 406 aaPredicted RBP38.07■■■■□ 3.69
NDEL1-202ENST00000380025 TARBP1Q13395 1621 aaKnown RBP38.07■■■■□ 3.68
NDEL1-202ENST00000380025 TDRD9Q8NDG6 1382 aaKnown RBP38.07■■■■□ 3.68
NDEL1-202ENST00000380025 GAPVD1Q14C86 1478 aa38.04■■■■□ 3.68
NDEL1-202ENST00000380025 CTTNBP2Q8WZ74 1663 aa38.01■■■■□ 3.68
NDEL1-202ENST00000380025 MRC2Q9UBG0 1479 aa38■■■■□ 3.67
NDEL1-202ENST00000380025 KANK4Q5T7N3 995 aaPredicted RBP37.99■■■■□ 3.67
NDEL1-202ENST00000380025 EFCAB5A4FU69 1503 aa37.88■■■■□ 3.65
NDEL1-202ENST00000380025 HNRNPUL2Q1KMD3 747 aaKnown RBP37.86■■■■□ 3.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms