RNA–Protein interactions for RNA: ENST00000344680.8

RTN2-202, Transcript of reticulon 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN2, Length 2,063 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN2-202ENST00000344680 NISCHQ9Y2I1 1504 aa55.43■■■■■ 6.46
RTN2-202ENST00000344680 CCDC180Q9P1Z9 1646 aa47.98■■■■■ 5.27
RTN2-202ENST00000344680 ZCCHC6Q5VYS8 1495 aaKnown RBP46.67■■■■■ 5.06
RTN2-202ENST00000344680 DCAF1Q9Y4B6 1507 aa45.83■■■■■ 4.93
RTN2-202ENST00000344680 ABCC9O60706 1549 aa45.8■■■■■ 4.92
RTN2-202ENST00000344680 DCAF8L2P0C7V8 631 aa45.64■■■■■ 4.9
RTN2-202ENST00000344680 SHROOM4Q9ULL8 1493 aa45.61■■■■■ 4.89
RTN2-202ENST00000344680 MYO15BQ96JP2 1530 aa45.08■■■■■ 4.81
RTN2-202ENST00000344680 NACADO15069 1562 aa44.71■■■■■ 4.75
RTN2-202ENST00000344680 RB1CC1Q8TDY2 1594 aa44.45■■■■■ 4.71
RTN2-202ENST00000344680 SCRIBQ14160 1630 aa44.23■■■■■ 4.67
RTN2-202ENST00000344680 SUPT5HO00267 1087 aaKnown RBP44.2■■■■■ 4.67
RTN2-202ENST00000344680 UNC13AQ9UPW8 1703 aa43.6■■■■■ 4.57
RTN2-202ENST00000344680 RSF1Q96T23 1441 aaPredicted RBP43.25■■■■■ 4.51
RTN2-202ENST00000344680 BICRAQ9NZM4 1560 aa43.19■■■■■ 4.5
RTN2-202ENST00000344680 PABPN1Q86U42 306 aaKnown RBP eCLIP43.13■■■■■ 4.49
RTN2-202ENST00000344680 CECR2Q9BXF3 1484 aa43.05■■■■■ 4.48
RTN2-202ENST00000344680 MROH2BQ7Z745 1585 aa42.85■■■■■ 4.45
RTN2-202ENST00000344680 BAZ1AQ9NRL2 1556 aaPredicted RBP42.73■■■■■ 4.43
RTN2-202ENST00000344680 CHIC1Q5VXU3 224 aa42.64■■■■■ 4.42
RTN2-202ENST00000344680 WIZO95785 1651 aa42.49■■■■■ 4.39
RTN2-202ENST00000344680 SMARCA4P51532 1647 aa42.45■■■■■ 4.39
RTN2-202ENST00000344680 TOP2AP11388 1531 aaKnown RBP42.07■■■■■ 4.33
RTN2-202ENST00000344680 PEG3Q9GZU2 1588 aa41.93■■■■■ 4.3
RTN2-202ENST00000344680 EIF4G1Q04637 1599 aaKnown RBP41.9■■■■■ 4.3
RTN2-202ENST00000344680 CCDC88BA6NC98 1476 aa41.71■■■■■ 4.27
RTN2-202ENST00000344680 SMARCA2P51531 1590 aa41.7■■■■■ 4.27
RTN2-202ENST00000344680 ATAD2BQ9ULI0 1458 aa41.67■■■■■ 4.26
RTN2-202ENST00000344680 TRIM41Q8WV44 630 aa41.53■■■■■ 4.24
RTN2-202ENST00000344680 BAZ1BQ9UIG0 1483 aaKnown RBP41.43■■■■■ 4.22
RTN2-202ENST00000344680 CC2D2AQ9P2K1 1620 aa41.42■■■■■ 4.22
RTN2-202ENST00000344680 NCAPD3P42695 1498 aa41.3■■■■■ 4.2
RTN2-202ENST00000344680 HMGXB3Q12766 1538 aa41.17■■■■■ 4.18
RTN2-202ENST00000344680 LOC105371045A0A1W2PR82 267 aa41.03■■■■■ 4.16
RTN2-202ENST00000344680 ABCC8Q09428 1581 aa40.96■■■■■ 4.15
RTN2-202ENST00000344680 DNAJC5BQ9UF47 199 aa40.95■■■■■ 4.15
RTN2-202ENST00000344680 FAM9AQ8IZU1 332 aaPredicted RBP40.76■■■■■ 4.12
RTN2-202ENST00000344680 WRNQ14191 1432 aaPredicted RBP eCLIP40.67■■■■■ 4.1
RTN2-202ENST00000344680 HRCP23327 699 aa40.51■■■■■ 4.07
RTN2-202ENST00000344680 CFTRP13569 1480 aa40.46■■■■■ 4.07
RTN2-202ENST00000344680 SYNJ1O43426 1573 aa40.44■■■■■ 4.06
RTN2-202ENST00000344680 EEA1Q15075 1411 aa40.39■■■■■ 4.06
RTN2-202ENST00000344680 SOGA1O94964 1423 aa40.36■■■■■ 4.05
RTN2-202ENST00000344680 TOP2BQ02880 1626 aa40.24■■■■■ 4.03
RTN2-202ENST00000344680 CADPSQ9ULU8 1353 aa40.22■■■■■ 4.03
RTN2-202ENST00000344680 RUSC2Q8N2Y8 1516 aa40.17■■■■■ 4.02
RTN2-202ENST00000344680 BIVM-ERCC5R4GMW8 1640 aa40.16■■■■■ 4.02
RTN2-202ENST00000344680 CSRNP3Q8WYN3 585 aa40.15■■■■■ 4.02
RTN2-202ENST00000344680 EHMT2Q96KQ7 1210 aa40.15■■■■■ 4.02
RTN2-202ENST00000344680 PRDM2Q13029 1718 aa40.14■■■■■ 4.02
RTN2-202ENST00000344680 NESP48681 1621 aa40.08■■■■■ 4.01
RTN2-202ENST00000344680 CUX1P39880 1505 aa40.02■■■■■ 4
RTN2-202ENST00000344680 LAMC3Q9Y6N6 1575 aa39.95■■■■□ 3.99
RTN2-202ENST00000344680 TNIKQ9UKE5 1360 aa39.87■■■■□ 3.97
RTN2-202ENST00000344680 GOLGA3Q08378 1498 aa39.84■■■■□ 3.97
RTN2-202ENST00000344680 CEP164Q9UPV0 1460 aa39.79■■■■□ 3.96
RTN2-202ENST00000344680 KIF21BO75037 1637 aa39.78■■■■□ 3.96
RTN2-202ENST00000344680 FANCD2Q9BXW9 1451 aa39.77■■■■□ 3.96
RTN2-202ENST00000344680 PCGF6Q9BYE7 350 aa39.71■■■■□ 3.95
RTN2-202ENST00000344680 UBTFP17480 764 aaKnown RBP39.66■■■■□ 3.94
RTN2-202ENST00000344680 PELP1Q8IZL8 1130 aaKnown RBP39.66■■■■□ 3.94
RTN2-202ENST00000344680 CEP162Q5TB80 1403 aa39.66■■■■□ 3.94
RTN2-202ENST00000344680 PDS5BQ9NTI5 1447 aa39.66■■■■□ 3.94
RTN2-202ENST00000344680 TRIM26Q12899 539 aaPredicted RBP39.6■■■■□ 3.93
RTN2-202ENST00000344680 KIF27Q86VH2 1401 aa39.6■■■■□ 3.93
RTN2-202ENST00000344680 KIF21AQ7Z4S6 1674 aa39.56■■■■□ 3.92
RTN2-202ENST00000344680 RAPGEF2Q9Y4G8 1499 aa39.5■■■■□ 3.91
RTN2-202ENST00000344680 FGD5Q6ZNL6 1462 aa39.49■■■■□ 3.91
RTN2-202ENST00000344680 PRXQ9BXM0 1461 aa39.49■■■■□ 3.91
RTN2-202ENST00000344680 DNMBPQ6XZF7 1577 aa39.46■■■■□ 3.91
RTN2-202ENST00000344680 ERICH3Q5RHP9 1530 aa39.43■■■■□ 3.9
RTN2-202ENST00000344680 TOPBP1Q92547 1522 aa39.38■■■■□ 3.89
RTN2-202ENST00000344680 CUX2O14529 1486 aa39.35■■■■□ 3.89
RTN2-202ENST00000344680 URB2Q14146 1524 aaKnown RBP39.32■■■■□ 3.89
RTN2-202ENST00000344680 ERCC6Q03468 1493 aa39.27■■■■□ 3.88
RTN2-202ENST00000344680 IGF1RP08069 1367 aa39.23■■■■□ 3.87
RTN2-202ENST00000344680 CLIP1P30622 1438 aa39.23■■■■□ 3.87
RTN2-202ENST00000344680 POLA1P09884 1462 aaPredicted RBP39.23■■■■□ 3.87
RTN2-202ENST00000344680 MRC2Q9UBG0 1479 aa39.19■■■■□ 3.86
RTN2-202ENST00000344680 ABCA10Q8WWZ4 1543 aa39.17■■■■□ 3.86
RTN2-202ENST00000344680 RAD54L2Q9Y4B4 1467 aa39.12■■■■□ 3.85
RTN2-202ENST00000344680 THOC2Q8NI27 1593 aaKnown RBP39.03■■■■□ 3.84
RTN2-202ENST00000344680 PPARGC1BQ86YN6 1023 aaKnown RBP39.02■■■■□ 3.84
RTN2-202ENST00000344680 CARMIL1Q5VZK9 1371 aa39.02■■■■□ 3.84
RTN2-202ENST00000344680 WDR62O43379 1518 aa39.01■■■■□ 3.83
RTN2-202ENST00000344680 VPS8Q8N3P4 1428 aa38.97■■■■□ 3.83
RTN2-202ENST00000344680 WDR97A6NE52 1622 aa38.92■■■■□ 3.82
RTN2-202ENST00000344680 RANGAP1P46060 587 aaPredicted RBP38.83■■■■□ 3.81
RTN2-202ENST00000344680 ARAP1Q96P48 1450 aa38.77■■■■□ 3.8
RTN2-202ENST00000344680 CUL7Q14999 1698 aa38.76■■■■□ 3.8
RTN2-202ENST00000344680 ABCA5Q8WWZ7 1642 aa38.76■■■■□ 3.8
RTN2-202ENST00000344680 TARBP1Q13395 1621 aaKnown RBP38.75■■■■□ 3.79
RTN2-202ENST00000344680 TDRD9Q8NDG6 1382 aaKnown RBP38.71■■■■□ 3.79
RTN2-202ENST00000344680 GAPVD1Q14C86 1478 aa38.69■■■■□ 3.78
RTN2-202ENST00000344680 ARHGAP35Q9NRY4 1499 aa38.67■■■■□ 3.78
RTN2-202ENST00000344680 IFT140Q96RY7 1462 aa38.62■■■■□ 3.77
RTN2-202ENST00000344680 APLP2Q06481 763 aa38.6■■■■□ 3.77
RTN2-202ENST00000344680 TTBK1Q5TCY1 1321 aaPredicted RBP38.57■■■■□ 3.76
RTN2-202ENST00000344680 ZEB1P37275 1124 aaPredicted RBP38.53■■■■□ 3.76
RTN2-202ENST00000344680 ZNF608Q9ULD9 1512 aaPredicted RBP38.5■■■■□ 3.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms