RNA–Protein interactions for RNA: ENST00000628549.1

UBE2A-207, Transcript of ubiquitin conjugating enzyme E2 A, humanhuman

TSL 2 BASIC

Gene UBE2A, Length 934 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2A-207ENST00000628549 NISCHQ9Y2I1 1504 aa63.64■■■■■ 7.78
UBE2A-207ENST00000628549 CCDC180Q9P1Z9 1646 aa56.77■■■■■ 6.68
UBE2A-207ENST00000628549 ABCC9O60706 1549 aa55.5■■■■■ 6.47
UBE2A-207ENST00000628549 RB1CC1Q8TDY2 1594 aa53.45■■■■■ 6.15
UBE2A-207ENST00000628549 NACADO15069 1562 aa53.34■■■■■ 6.13
UBE2A-207ENST00000628549 DCAF8L2P0C7V8 631 aa53.23■■■■■ 6.11
UBE2A-207ENST00000628549 ZCCHC6Q5VYS8 1495 aaKnown RBP52.99■■■■■ 6.07
UBE2A-207ENST00000628549 MYO15BQ96JP2 1530 aa52.96■■■■■ 6.07
UBE2A-207ENST00000628549 DCAF1Q9Y4B6 1507 aa52.69■■■■■ 6.03
UBE2A-207ENST00000628549 UNC13AQ9UPW8 1703 aa52.25■■■■■ 5.95
UBE2A-207ENST00000628549 PABPN1Q86U42 306 aaKnown RBP eCLIP51.78■■■■■ 5.88
UBE2A-207ENST00000628549 BICRAQ9NZM4 1560 aa51.71■■■■■ 5.87
UBE2A-207ENST00000628549 SCRIBQ14160 1630 aa51.71■■■■■ 5.87
UBE2A-207ENST00000628549 SHROOM4Q9ULL8 1493 aa51.29■■■■■ 5.8
UBE2A-207ENST00000628549 DNAJC5BQ9UF47 199 aa50.86■■■■■ 5.73
UBE2A-207ENST00000628549 EIF4G1Q04637 1599 aaKnown RBP50.41■■■■■ 5.66
UBE2A-207ENST00000628549 CC2D2AQ9P2K1 1620 aa50.24■■■■■ 5.63
UBE2A-207ENST00000628549 CECR2Q9BXF3 1484 aa49.9■■■■■ 5.58
UBE2A-207ENST00000628549 SMARCA4P51532 1647 aa49.45■■■■■ 5.51
UBE2A-207ENST00000628549 BAZ1AQ9NRL2 1556 aaPredicted RBP49.41■■■■■ 5.5
UBE2A-207ENST00000628549 SMARCA2P51531 1590 aa49.19■■■■■ 5.46
UBE2A-207ENST00000628549 ATAD2BQ9ULI0 1458 aa49.14■■■■■ 5.46
UBE2A-207ENST00000628549 NCAPD3P42695 1498 aa49.13■■■■■ 5.46
UBE2A-207ENST00000628549 MROH2BQ7Z745 1585 aa49.01■■■■■ 5.44
UBE2A-207ENST00000628549 HMGXB3Q12766 1538 aa48.96■■■■■ 5.43
UBE2A-207ENST00000628549 PEG3Q9GZU2 1588 aa48.94■■■■■ 5.43
UBE2A-207ENST00000628549 BAZ1BQ9UIG0 1483 aaKnown RBP48.8■■■■■ 5.4
UBE2A-207ENST00000628549 WIZO95785 1651 aa48.54■■■■■ 5.36
UBE2A-207ENST00000628549 RSF1Q96T23 1441 aaPredicted RBP48.41■■■■■ 5.34
UBE2A-207ENST00000628549 TOP2AP11388 1531 aaKnown RBP48.03■■■■■ 5.28
UBE2A-207ENST00000628549 LAMC3Q9Y6N6 1575 aa47.96■■■■■ 5.27
UBE2A-207ENST00000628549 NESP48681 1621 aa47.96■■■■■ 5.27
UBE2A-207ENST00000628549 ERCC6Q03468 1493 aa47.94■■■■■ 5.26
UBE2A-207ENST00000628549 CADPSQ9ULU8 1353 aa47.71■■■■■ 5.23
UBE2A-207ENST00000628549 PDS5BQ9NTI5 1447 aa47.61■■■■■ 5.21
UBE2A-207ENST00000628549 KIF21AQ7Z4S6 1674 aa47.52■■■■■ 5.2
UBE2A-207ENST00000628549 CUX2O14529 1486 aa47.45■■■■■ 5.19
UBE2A-207ENST00000628549 CCDC88BA6NC98 1476 aa47.4■■■■■ 5.18
UBE2A-207ENST00000628549 CFTRP13569 1480 aa47.4■■■■■ 5.18
UBE2A-207ENST00000628549 THOC2Q8NI27 1593 aaKnown RBP47.33■■■■■ 5.17
UBE2A-207ENST00000628549 PRDM2Q13029 1718 aa47.25■■■■■ 5.15
UBE2A-207ENST00000628549 FANCD2Q9BXW9 1451 aa47.19■■■■■ 5.14
UBE2A-207ENST00000628549 CEP164Q9UPV0 1460 aa47.18■■■■■ 5.14
UBE2A-207ENST00000628549 SUPT5HO00267 1087 aaKnown RBP47.14■■■■■ 5.14
UBE2A-207ENST00000628549 MRC2Q9UBG0 1479 aa47.11■■■■■ 5.13
UBE2A-207ENST00000628549 WDR62O43379 1518 aa46.95■■■■■ 5.11
UBE2A-207ENST00000628549 URB2Q14146 1524 aaKnown RBP46.68■■■■■ 5.06
UBE2A-207ENST00000628549 ABCC8Q09428 1581 aa46.5■■■■■ 5.03
UBE2A-207ENST00000628549 TOPBP1Q92547 1522 aa46.42■■■■■ 5.02
UBE2A-207ENST00000628549 DNMBPQ6XZF7 1577 aa46.41■■■■■ 5.02
UBE2A-207ENST00000628549 IFT140Q96RY7 1462 aa46.19■■■■■ 4.98
UBE2A-207ENST00000628549 DNAJC5Q9H3Z4 198 aa46.01■■■■■ 4.96
UBE2A-207ENST00000628549 POLA1P09884 1462 aaPredicted RBP46■■■■■ 4.95
UBE2A-207ENST00000628549 CUX1P39880 1505 aa46■■■■■ 4.95
UBE2A-207ENST00000628549 TARBP1Q13395 1621 aaKnown RBP45.92■■■■■ 4.94
UBE2A-207ENST00000628549 ZNF608Q9ULD9 1512 aaPredicted RBP45.89■■■■■ 4.94
UBE2A-207ENST00000628549 FGD5Q6ZNL6 1462 aa45.89■■■■■ 4.94
UBE2A-207ENST00000628549 SOGA1O94964 1423 aa45.83■■■■■ 4.93
UBE2A-207ENST00000628549 EIF4G3O43432 1585 aaKnown RBP45.81■■■■■ 4.92
UBE2A-207ENST00000628549 RAD54L2Q9Y4B4 1467 aa45.77■■■■■ 4.92
UBE2A-207ENST00000628549 WRNQ14191 1432 aaPredicted RBP eCLIP45.71■■■■■ 4.91
UBE2A-207ENST00000628549 BIVM-ERCC5R4GMW8 1640 aa45.67■■■■■ 4.9
UBE2A-207ENST00000628549 WDR97A6NE52 1622 aa45.66■■■■■ 4.9
UBE2A-207ENST00000628549 TOP2BQ02880 1626 aa45.65■■■■■ 4.9
UBE2A-207ENST00000628549 AQRO60306 1485 aaKnown RBP eCLIP45.63■■■■■ 4.97e-8■■■■□ 22.6
UBE2A-207ENST00000628549 SYNJ1O43426 1573 aa45.58■■■■■ 4.89
UBE2A-207ENST00000628549 TDRD9Q8NDG6 1382 aaKnown RBP45.54■■■■■ 4.88
UBE2A-207ENST00000628549 ABCA10Q8WWZ4 1543 aa45.45■■■■■ 4.87
UBE2A-207ENST00000628549 OSCARQ8IYS5 282 aa45.43■■■■■ 4.86
UBE2A-207ENST00000628549 GRIN2BQ13224 1484 aa45.34■■■■■ 4.85
UBE2A-207ENST00000628549 PBRM1Q86U86 1689 aa45.32■■■■■ 4.85
UBE2A-207ENST00000628549 GAPVD1Q14C86 1478 aa45.31■■■■■ 4.84
UBE2A-207ENST00000628549 CHD1O14646 1710 aa45.31■■■■■ 4.84
UBE2A-207ENST00000628549 ABCA5Q8WWZ7 1642 aa45.3■■■■■ 4.84
UBE2A-207ENST00000628549 SNAPC4Q5SXM2 1469 aa45.26■■■■■ 4.84
UBE2A-207ENST00000628549 MAGI1Q96QZ7 1491 aaPredicted RBP45.24■■■■■ 4.83
UBE2A-207ENST00000628549 FBLN2P98095 1184 aa45.18■■■■■ 4.82
UBE2A-207ENST00000628549 SYNJ2O15056 1496 aa45.05■■■■■ 4.8
UBE2A-207ENST00000628549 CHMP7Q8WUX9 453 aaPredicted RBP45.05■■■■■ 4.8
UBE2A-207ENST00000628549 ERICH3Q5RHP9 1530 aa44.94■■■■■ 4.78
UBE2A-207ENST00000628549 ADAMTS12P58397 1594 aa44.88■■■■■ 4.78
UBE2A-207ENST00000628549 FHAD1B1AJZ9 1412 aa44.79■■■■■ 4.76
UBE2A-207ENST00000628549 KIF27Q86VH2 1401 aa44.79■■■■■ 4.76
UBE2A-207ENST00000628549 RIMBP3CA6NJZ7 1639 aa44.74■■■■■ 4.75
UBE2A-207ENST00000628549 RIMBP3BA6NNM3 1639 aa44.74■■■■■ 4.75
UBE2A-207ENST00000628549 RIMBP3Q9UFD9 1639 aa44.74■■■■■ 4.75
UBE2A-207ENST00000628549 GRIN2AQ12879 1464 aa44.73■■■■■ 4.75
UBE2A-207ENST00000628549 CLASP1Q7Z460 1538 aa44.72■■■■■ 4.75
UBE2A-207ENST00000628549 ARHGEF11O15085 1522 aa44.69■■■■■ 4.74
UBE2A-207ENST00000628549 CUL7Q14999 1698 aa44.58■■■■■ 4.73
UBE2A-207ENST00000628549 TRIM41Q8WV44 630 aa44.57■■■■■ 4.73
UBE2A-207ENST00000628549 IGF1RP08069 1367 aa44.52■■■■■ 4.72
UBE2A-207ENST00000628549 NUP160Q12769 1436 aa44.5■■■■■ 4.71
UBE2A-207ENST00000628549 CEP170Q5SW79 1584 aa44.5■■■■■ 4.71
UBE2A-207ENST00000628549 CARMIL1Q5VZK9 1371 aa44.31■■■■■ 4.68
UBE2A-207ENST00000628549 ARAP1Q96P48 1450 aa44.28■■■■■ 4.68
UBE2A-207ENST00000628549 CYB5RLQ6IPT4 315 aa44.25■■■■■ 4.67
UBE2A-207ENST00000628549 SHROOM2Q13796 1616 aa44.24■■■■■ 4.67
UBE2A-207ENST00000628549 RUSC2Q8N2Y8 1516 aa44.23■■■■■ 4.67
UBE2A-207ENST00000628549 KIAA0586Q9BVV6 1533 aa44.09■■■■■ 4.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms