RNA–Protein interactions for RNA: ENST00000416460.6

NR6A1-203, Transcript of nuclear receptor subfamily 6 group A member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NR6A1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR6A1-203ENST00000416460 NISCHQ9Y2I1 1504 aa55■■■■■ 6.39
NR6A1-203ENST00000416460 CCDC180Q9P1Z9 1646 aa47.76■■■■■ 5.24
NR6A1-203ENST00000416460 ZCCHC6Q5VYS8 1495 aaKnown RBP46.35■■■■■ 5.01
NR6A1-203ENST00000416460 DCAF1Q9Y4B6 1507 aa45.57■■■■■ 4.89
NR6A1-203ENST00000416460 SHROOM4Q9ULL8 1493 aa45.15■■■■■ 4.82
NR6A1-203ENST00000416460 DCAF8L2P0C7V8 631 aa45.04■■■■■ 4.8
NR6A1-203ENST00000416460 MYO15BQ96JP2 1530 aa44.81■■■■■ 4.76
NR6A1-203ENST00000416460 ABCC9O60706 1549 aa44.42■■■■■ 4.7
NR6A1-203ENST00000416460 NACADO15069 1562 aa44.3■■■■■ 4.68
NR6A1-203ENST00000416460 SCRIBQ14160 1630 aa43.88■■■■■ 4.62
NR6A1-203ENST00000416460 SUPT5HO00267 1087 aaKnown RBP43.76■■■■■ 4.6
NR6A1-203ENST00000416460 RB1CC1Q8TDY2 1594 aa43.75■■■■■ 4.59
NR6A1-203ENST00000416460 UNC13AQ9UPW8 1703 aa42.88■■■■■ 4.46
NR6A1-203ENST00000416460 RSF1Q96T23 1441 aaPredicted RBP42.88■■■■■ 4.45
NR6A1-203ENST00000416460 CECR2Q9BXF3 1484 aa42.61■■■■■ 4.41
NR6A1-203ENST00000416460 MROH2BQ7Z745 1585 aa42.47■■■■■ 4.39
NR6A1-203ENST00000416460 BAZ1AQ9NRL2 1556 aaPredicted RBP42.45■■■■■ 4.39
NR6A1-203ENST00000416460 BICRAQ9NZM4 1560 aa42.38■■■■■ 4.38
NR6A1-203ENST00000416460 CHIC1Q5VXU3 224 aa42.29■■■■■ 4.36
NR6A1-203ENST00000416460 WIZO95785 1651 aa42.17■■■■■ 4.34
NR6A1-203ENST00000416460 SMARCA4P51532 1647 aa42.17■■■■■ 4.34
NR6A1-203ENST00000416460 PABPN1Q86U42 306 aaKnown RBP eCLIP41.95■■■■■ 4.31
NR6A1-203ENST00000416460 TOP2AP11388 1531 aaKnown RBP41.81■■■■■ 4.28
NR6A1-203ENST00000416460 PEG3Q9GZU2 1588 aa41.67■■■■■ 4.26
NR6A1-203ENST00000416460 SMARCA2P51531 1590 aa41.42■■■■■ 4.22
NR6A1-203ENST00000416460 EIF4G1Q04637 1599 aaKnown RBP41.36■■■■■ 4.21
NR6A1-203ENST00000416460 CCDC88BA6NC98 1476 aa41.33■■■■■ 4.21
NR6A1-203ENST00000416460 ATAD2BQ9ULI0 1458 aa41.28■■■■■ 4.2
NR6A1-203ENST00000416460 TRIM41Q8WV44 630 aa41.17■■■■■ 4.18
NR6A1-203ENST00000416460 BAZ1BQ9UIG0 1483 aaKnown RBP41.09■■■■■ 4.17
NR6A1-203ENST00000416460 HMGXB3Q12766 1538 aa40.89■■■■■ 4.14
NR6A1-203ENST00000416460 NCAPD3P42695 1498 aa40.85■■■■■ 4.13
NR6A1-203ENST00000416460 ABCC8Q09428 1581 aa40.64■■■■■ 4.1
NR6A1-203ENST00000416460 LOC105371045A0A1W2PR82 267 aa40.61■■■■■ 4.09
NR6A1-203ENST00000416460 WRNQ14191 1432 aaPredicted RBP eCLIP40.36■■■■■ 4.05
NR6A1-203ENST00000416460 FAM9AQ8IZU1 332 aaPredicted RBP40.34■■■■■ 4.05
NR6A1-203ENST00000416460 CC2D2AQ9P2K1 1620 aa40.28■■■■■ 4.04
NR6A1-203ENST00000416460 EEA1Q15075 1411 aa40.2■■■■■ 4.03
NR6A1-203ENST00000416460 SYNJ1O43426 1573 aa40.16■■■■■ 4.02
NR6A1-203ENST00000416460 CFTRP13569 1480 aa40.11■■■■■ 4.01
NR6A1-203ENST00000416460 PRDM2Q13029 1718 aa40.04■■■■■ 4
NR6A1-203ENST00000416460 TOP2BQ02880 1626 aa40■■■■□ 3.99
NR6A1-203ENST00000416460 SOGA1O94964 1423 aa40■■■■□ 3.99
NR6A1-203ENST00000416460 BIVM-ERCC5R4GMW8 1640 aa39.97■■■■□ 3.99
NR6A1-203ENST00000416460 CADPSQ9ULU8 1353 aa39.81■■■■□ 3.96
NR6A1-203ENST00000416460 CSRNP3Q8WYN3 585 aa39.8■■■■□ 3.96
NR6A1-203ENST00000416460 RUSC2Q8N2Y8 1516 aa39.79■■■■□ 3.96
NR6A1-203ENST00000416460 CUX1P39880 1505 aa39.69■■■■□ 3.94
NR6A1-203ENST00000416460 EHMT2Q96KQ7 1210 aa39.66■■■■□ 3.94
NR6A1-203ENST00000416460 KIF21BO75037 1637 aa39.63■■■■□ 3.93
NR6A1-203ENST00000416460 GOLGA3Q08378 1498 aa39.62■■■■□ 3.93
NR6A1-203ENST00000416460 TNIKQ9UKE5 1360 aa39.61■■■■□ 3.93
NR6A1-203ENST00000416460 CEP164Q9UPV0 1460 aa39.58■■■■□ 3.93
NR6A1-203ENST00000416460 PCGF6Q9BYE7 350 aa39.45■■■■□ 3.91
NR6A1-203ENST00000416460 CEP162Q5TB80 1403 aa39.41■■■■□ 3.9
NR6A1-203ENST00000416460 TRIM26Q12899 539 aaPredicted RBP39.39■■■■□ 3.9
NR6A1-203ENST00000416460 LAMC3Q9Y6N6 1575 aa39.38■■■■□ 3.89
NR6A1-203ENST00000416460 FANCD2Q9BXW9 1451 aa39.38■■■■□ 3.89
NR6A1-203ENST00000416460 UBTFP17480 764 aaKnown RBP39.31■■■■□ 3.88
NR6A1-203ENST00000416460 KIF27Q86VH2 1401 aa39.3■■■■□ 3.88
NR6A1-203ENST00000416460 ERICH3Q5RHP9 1530 aa39.25■■■■□ 3.87
NR6A1-203ENST00000416460 PRXQ9BXM0 1461 aa39.19■■■■□ 3.86
NR6A1-203ENST00000416460 DNMBPQ6XZF7 1577 aa39.19■■■■□ 3.86
NR6A1-203ENST00000416460 NESP48681 1621 aa39.19■■■■□ 3.86
NR6A1-203ENST00000416460 RAPGEF2Q9Y4G8 1499 aa39.18■■■■□ 3.86
NR6A1-203ENST00000416460 FGD5Q6ZNL6 1462 aa39.16■■■■□ 3.86
NR6A1-203ENST00000416460 TOPBP1Q92547 1522 aa39.03■■■■□ 3.84
NR6A1-203ENST00000416460 PDS5BQ9NTI5 1447 aa39.02■■■■□ 3.84
NR6A1-203ENST00000416460 CUX2O14529 1486 aa39.02■■■■□ 3.84
NR6A1-203ENST00000416460 CLIP1P30622 1438 aa38.97■■■■□ 3.83
NR6A1-203ENST00000416460 HRCP23327 699 aa38.92■■■■□ 3.82
NR6A1-203ENST00000416460 POLA1P09884 1462 aaPredicted RBP38.88■■■■□ 3.82
NR6A1-203ENST00000416460 DNAJC5BQ9UF47 199 aa38.88■■■■□ 3.81
NR6A1-203ENST00000416460 ABCA10Q8WWZ4 1543 aa38.87■■■■□ 3.81
NR6A1-203ENST00000416460 URB2Q14146 1524 aaKnown RBP38.84■■■■□ 3.81
NR6A1-203ENST00000416460 IGF1RP08069 1367 aa38.84■■■■□ 3.81
NR6A1-203ENST00000416460 KIF21AQ7Z4S6 1674 aa38.81■■■■□ 3.8
NR6A1-203ENST00000416460 VPS8Q8N3P4 1428 aa38.75■■■■□ 3.79
NR6A1-203ENST00000416460 WDR97A6NE52 1622 aa38.72■■■■□ 3.79
NR6A1-203ENST00000416460 RAD54L2Q9Y4B4 1467 aa38.71■■■■□ 3.79
NR6A1-203ENST00000416460 CARMIL1Q5VZK9 1371 aa38.67■■■■□ 3.78
NR6A1-203ENST00000416460 CUL7Q14999 1698 aa38.59■■■■□ 3.77
NR6A1-203ENST00000416460 PPARGC1BQ86YN6 1023 aaKnown RBP38.59■■■■□ 3.77
NR6A1-203ENST00000416460 ABCA5Q8WWZ7 1642 aa38.52■■■■□ 3.76
NR6A1-203ENST00000416460 ARAP1Q96P48 1450 aa38.51■■■■□ 3.75
NR6A1-203ENST00000416460 MRC2Q9UBG0 1479 aa38.49■■■■□ 3.75
NR6A1-203ENST00000416460 TARBP1Q13395 1621 aaKnown RBP38.42■■■■□ 3.74
NR6A1-203ENST00000416460 ARHGAP35Q9NRY4 1499 aa38.38■■■■□ 3.74
NR6A1-203ENST00000416460 RANGAP1P46060 587 aaPredicted RBP38.37■■■■□ 3.73
NR6A1-203ENST00000416460 GAPVD1Q14C86 1478 aa38.35■■■■□ 3.73
NR6A1-203ENST00000416460 APLP2Q06481 763 aa38.35■■■■□ 3.73
NR6A1-203ENST00000416460 WDR62O43379 1518 aa38.28■■■■□ 3.72
NR6A1-203ENST00000416460 TDRD9Q8NDG6 1382 aaKnown RBP38.26■■■■□ 3.72
NR6A1-203ENST00000416460 CTTNBP2Q8WZ74 1663 aa38.25■■■■□ 3.71
NR6A1-203ENST00000416460 ZEB1P37275 1124 aaPredicted RBP38.23■■■■□ 3.71
NR6A1-203ENST00000416460 TTBK1Q5TCY1 1321 aaPredicted RBP38.17■■■■□ 3.7
NR6A1-203ENST00000416460 EFCAB5A4FU69 1503 aa38.15■■■■□ 3.7
NR6A1-203ENST00000416460 PBRM1Q86U86 1689 aa38.14■■■■□ 3.7
NR6A1-203ENST00000416460 IFT140Q96RY7 1462 aa38.13■■■■□ 3.69
NR6A1-203ENST00000416460 ERCC6Q03468 1493 aa38.07■■■■□ 3.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms