RNA–Protein interactions for RNA: ENST00000456842.1

SMIM12-205, Transcript of small integral membrane protein 12, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM12, Length 918 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-205ENST00000456842 NISCHQ9Y2I1 1504 aa65.4■■■■■ 8.06
SMIM12-205ENST00000456842 CCDC180Q9P1Z9 1646 aa58.26■■■■■ 6.92
SMIM12-205ENST00000456842 ABCC9O60706 1549 aa58.01■■■■■ 6.88
SMIM12-205ENST00000456842 RB1CC1Q8TDY2 1594 aa55.28■■■■■ 6.44
SMIM12-205ENST00000456842 DCAF8L2P0C7V8 631 aa55.22■■■■■ 6.43
SMIM12-205ENST00000456842 NACADO15069 1562 aa55.04■■■■■ 6.4
SMIM12-205ENST00000456842 MYO15BQ96JP2 1530 aa54.4■■■■■ 6.3
SMIM12-205ENST00000456842 ZCCHC6Q5VYS8 1495 aaKnown RBP54.3■■■■■ 6.28
SMIM12-205ENST00000456842 PABPN1Q86U42 306 aaKnown RBP eCLIP54.22■■■■■ 6.27
SMIM12-205ENST00000456842 DNAJC5BQ9UF47 199 aa54.03■■■■■ 6.24
SMIM12-205ENST00000456842 UNC13AQ9UPW8 1703 aa53.97■■■■■ 6.23
SMIM12-205ENST00000456842 DCAF1Q9Y4B6 1507 aa53.94■■■■■ 6.23
SMIM12-205ENST00000456842 BICRAQ9NZM4 1560 aa53.71■■■■■ 6.19
SMIM12-205ENST00000456842 SCRIBQ14160 1630 aa53.31■■■■■ 6.13
SMIM12-205ENST00000456842 SHROOM4Q9ULL8 1493 aa52.88■■■■■ 6.06
SMIM12-205ENST00000456842 EIF4G1Q04637 1599 aaKnown RBP52.34■■■■■ 5.97
SMIM12-205ENST00000456842 CC2D2AQ9P2K1 1620 aa52.32■■■■■ 5.97
SMIM12-205ENST00000456842 CECR2Q9BXF3 1484 aa52.14■■■■■ 5.94
SMIM12-205ENST00000456842 NCAPD3P42695 1498 aa50.88■■■■■ 5.74
SMIM12-205ENST00000456842 SMARCA4P51532 1647 aa50.85■■■■■ 5.73
SMIM12-205ENST00000456842 ATAD2BQ9ULI0 1458 aa50.84■■■■■ 5.73
SMIM12-205ENST00000456842 BAZ1AQ9NRL2 1556 aaPredicted RBP50.68■■■■■ 5.7
SMIM12-205ENST00000456842 SMARCA2P51531 1590 aa50.63■■■■■ 5.7
SMIM12-205ENST00000456842 HMGXB3Q12766 1538 aa50.46■■■■■ 5.67
SMIM12-205ENST00000456842 MROH2BQ7Z745 1585 aa50.46■■■■■ 5.67
SMIM12-205ENST00000456842 BAZ1BQ9UIG0 1483 aaKnown RBP50.35■■■■■ 5.65
SMIM12-205ENST00000456842 PEG3Q9GZU2 1588 aa50.29■■■■■ 5.64
SMIM12-205ENST00000456842 NESP48681 1621 aa50■■■■■ 5.6
SMIM12-205ENST00000456842 ERCC6Q03468 1493 aa49.99■■■■■ 5.59
SMIM12-205ENST00000456842 WIZO95785 1651 aa49.84■■■■■ 5.57
SMIM12-205ENST00000456842 RSF1Q96T23 1441 aaPredicted RBP49.64■■■■■ 5.54
SMIM12-205ENST00000456842 CUX2O14529 1486 aa49.61■■■■■ 5.53
SMIM12-205ENST00000456842 LAMC3Q9Y6N6 1575 aa49.55■■■■■ 5.52
SMIM12-205ENST00000456842 CADPSQ9ULU8 1353 aa49.41■■■■■ 5.5
SMIM12-205ENST00000456842 PDS5BQ9NTI5 1447 aa49.34■■■■■ 5.49
SMIM12-205ENST00000456842 THOC2Q8NI27 1593 aaKnown RBP49.22■■■■■ 5.47
SMIM12-205ENST00000456842 KIF21AQ7Z4S6 1674 aa49.21■■■■■ 5.47
SMIM12-205ENST00000456842 TOP2AP11388 1531 aaKnown RBP49.21■■■■■ 5.47
SMIM12-205ENST00000456842 DNAJC5Q9H3Z4 198 aa49.1■■■■■ 5.45
SMIM12-205ENST00000456842 CFTRP13569 1480 aa48.92■■■■■ 5.42
SMIM12-205ENST00000456842 MRC2Q9UBG0 1479 aa48.88■■■■■ 5.42
SMIM12-205ENST00000456842 FANCD2Q9BXW9 1451 aa48.83■■■■■ 5.41
SMIM12-205ENST00000456842 CEP164Q9UPV0 1460 aa48.8■■■■■ 5.4
SMIM12-205ENST00000456842 CCDC88BA6NC98 1476 aa48.74■■■■■ 5.39
SMIM12-205ENST00000456842 WDR62O43379 1518 aa48.69■■■■■ 5.39
SMIM12-205ENST00000456842 URB2Q14146 1524 aaKnown RBP48.4■■■■■ 5.34
SMIM12-205ENST00000456842 PRDM2Q13029 1718 aa48.25■■■■■ 5.31
SMIM12-205ENST00000456842 SUPT5HO00267 1087 aaKnown RBP48.04■■■■■ 5.28
SMIM12-205ENST00000456842 TOPBP1Q92547 1522 aa47.96■■■■■ 5.27
SMIM12-205ENST00000456842 ABCC8Q09428 1581 aa47.8■■■■■ 5.24
SMIM12-205ENST00000456842 IFT140Q96RY7 1462 aa47.8■■■■■ 5.24
SMIM12-205ENST00000456842 DNMBPQ6XZF7 1577 aa47.77■■■■■ 5.24
SMIM12-205ENST00000456842 ZNF608Q9ULD9 1512 aaPredicted RBP47.76■■■■■ 5.24
SMIM12-205ENST00000456842 OSCARQ8IYS5 282 aa47.59■■■■■ 5.21
SMIM12-205ENST00000456842 POLA1P09884 1462 aaPredicted RBP47.52■■■■■ 5.2
SMIM12-205ENST00000456842 TARBP1Q13395 1621 aaKnown RBP47.43■■■■■ 5.18
SMIM12-205ENST00000456842 AQRO60306 1485 aaKnown RBP eCLIP47.42■■■■■ 5.18
SMIM12-205ENST00000456842 RAD54L2Q9Y4B4 1467 aa47.41■■■■■ 5.18
SMIM12-205ENST00000456842 EIF4G3O43432 1585 aaKnown RBP47.39■■■■■ 5.18
SMIM12-205ENST00000456842 SOGA1O94964 1423 aa47.36■■■■■ 5.17
SMIM12-205ENST00000456842 CUX1P39880 1505 aa47.35■■■■■ 5.17
SMIM12-205ENST00000456842 FGD5Q6ZNL6 1462 aa47.31■■■■■ 5.16
SMIM12-205ENST00000456842 TRIM41Q8WV44 630 aa47.29■■■■■ 5.16
SMIM12-205ENST00000456842 TDRD9Q8NDG6 1382 aaKnown RBP47.25■■■■■ 5.16
SMIM12-205ENST00000456842 FBLN2P98095 1184 aa47.07■■■■■ 5.13
SMIM12-205ENST00000456842 CHD1O14646 1710 aa46.91■■■■■ 5.1
SMIM12-205ENST00000456842 SNAPC4Q5SXM2 1469 aa46.89■■■■■ 5.1
SMIM12-205ENST00000456842 WDR97A6NE52 1622 aa46.86■■■■■ 5.09
SMIM12-205ENST00000456842 GRIN2BQ13224 1484 aa46.82■■■■■ 5.09
SMIM12-205ENST00000456842 WRNQ14191 1432 aaPredicted RBP eCLIP46.79■■■■■ 5.08
SMIM12-205ENST00000456842 RIMBP3CA6NJZ7 1639 aa46.79■■■■■ 5.08
SMIM12-205ENST00000456842 RIMBP3BA6NNM3 1639 aa46.79■■■■■ 5.08
SMIM12-205ENST00000456842 RIMBP3Q9UFD9 1639 aa46.79■■■■■ 5.08
SMIM12-205ENST00000456842 ABCA10Q8WWZ4 1543 aa46.75■■■■■ 5.07
SMIM12-205ENST00000456842 CHMP7Q8WUX9 453 aaPredicted RBP46.75■■■■■ 5.07
SMIM12-205ENST00000456842 GAPVD1Q14C86 1478 aa46.75■■■■■ 5.07
SMIM12-205ENST00000456842 ARHGEF11O15085 1522 aa46.74■■■■■ 5.07
SMIM12-205ENST00000456842 MAGI1Q96QZ7 1491 aaPredicted RBP46.71■■■■■ 5.07
SMIM12-205ENST00000456842 SYNJ1O43426 1573 aa46.69■■■■■ 5.07
SMIM12-205ENST00000456842 TOP2BQ02880 1626 aa46.66■■■■■ 5.06
SMIM12-205ENST00000456842 BIVM-ERCC5R4GMW8 1640 aa46.62■■■■■ 5.05
SMIM12-205ENST00000456842 SYNJ2O15056 1496 aa46.58■■■■■ 5.05
SMIM12-205ENST00000456842 ABCA5Q8WWZ7 1642 aa46.58■■■■■ 5.05
SMIM12-205ENST00000456842 PBRM1Q86U86 1689 aa46.56■■■■■ 5.04
SMIM12-205ENST00000456842 CYB5RLQ6IPT4 315 aa46.52■■■■■ 5.04
SMIM12-205ENST00000456842 CLASP1Q7Z460 1538 aa46.43■■■■■ 5.02
SMIM12-205ENST00000456842 ARAP1Q96P48 1450 aa46.36■■■■■ 5.01
SMIM12-205ENST00000456842 ADAMTS12P58397 1594 aa46.22■■■■■ 4.99
SMIM12-205ENST00000456842 GRIN2AQ12879 1464 aa46.21■■■■■ 4.99
SMIM12-205ENST00000456842 FHAD1B1AJZ9 1412 aa46.17■■■■■ 4.98
SMIM12-205ENST00000456842 ERICH3Q5RHP9 1530 aa46.13■■■■■ 4.98
SMIM12-205ENST00000456842 NUP160Q12769 1436 aa46.03■■■■■ 4.96
SMIM12-205ENST00000456842 CEP170Q5SW79 1584 aa46.02■■■■■ 4.96
SMIM12-205ENST00000456842 ERCC6L2Q5T890 1561 aa45.85■■■■■ 4.93
SMIM12-205ENST00000456842 KIF27Q86VH2 1401 aa45.85■■■■■ 4.93
SMIM12-205ENST00000456842 IGF1RP08069 1367 aa45.84■■■■■ 4.93
SMIM12-205ENST00000456842 TRHP20396 242 aaPredicted RBP45.81■■■■■ 4.92
SMIM12-205ENST00000456842 SHROOM2Q13796 1616 aa45.68■■■■■ 4.9
SMIM12-205ENST00000456842 JPH4Q96JJ6 628 aa45.68■■■■■ 4.9
SMIM12-205ENST00000456842 PRG4Q92954 1404 aaPredicted RBP45.61■■■■■ 4.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms