RNA–Protein interactions for RNA: ENST00000368361.8

CLK2-203, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLK2, Length 2,166 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-203ENST00000368361 NISCHQ9Y2I1 1504 aa54.6■■■■■ 6.33
CLK2-203ENST00000368361 CCDC180Q9P1Z9 1646 aa47.12■■■■■ 5.13
CLK2-203ENST00000368361 ZCCHC6Q5VYS8 1495 aaKnown RBP46.02■■■■■ 4.96
CLK2-203ENST00000368361 SHROOM4Q9ULL8 1493 aa45.38■■■■■ 4.85
CLK2-203ENST00000368361 DCAF8L2P0C7V8 631 aa45.13■■■■■ 4.82
CLK2-203ENST00000368361 DCAF1Q9Y4B6 1507 aa44.99■■■■■ 4.79
CLK2-203ENST00000368361 ABCC9O60706 1549 aa44.17■■■■■ 4.66
CLK2-203ENST00000368361 MYO15BQ96JP2 1530 aa44.14■■■■■ 4.66
CLK2-203ENST00000368361 SUPT5HO00267 1087 aaKnown RBP44■■■■■ 4.63
CLK2-203ENST00000368361 NACADO15069 1562 aa43.73■■■■■ 4.59
CLK2-203ENST00000368361 SCRIBQ14160 1630 aa43.69■■■■■ 4.58
CLK2-203ENST00000368361 RB1CC1Q8TDY2 1594 aa43.22■■■■■ 4.51
CLK2-203ENST00000368361 RSF1Q96T23 1441 aaPredicted RBP42.71■■■■■ 4.43
CLK2-203ENST00000368361 UNC13AQ9UPW8 1703 aa42.52■■■■■ 4.4
CLK2-203ENST00000368361 CECR2Q9BXF3 1484 aa42.51■■■■■ 4.4
CLK2-203ENST00000368361 CHIC1Q5VXU3 224 aa42.42■■■■■ 4.38
CLK2-203ENST00000368361 MROH2BQ7Z745 1585 aa42.31■■■■■ 4.36
CLK2-203ENST00000368361 BAZ1AQ9NRL2 1556 aaPredicted RBP42.06■■■■■ 4.32
CLK2-203ENST00000368361 WIZO95785 1651 aa42.03■■■■■ 4.32
CLK2-203ENST00000368361 BICRAQ9NZM4 1560 aa42.01■■■■■ 4.32
CLK2-203ENST00000368361 PABPN1Q86U42 306 aaKnown RBP eCLIP41.89■■■■■ 4.32e-6■□□□□ 11.1
CLK2-203ENST00000368361 SMARCA4P51532 1647 aa41.82■■■■■ 4.29
CLK2-203ENST00000368361 TOP2AP11388 1531 aaKnown RBP41.47■■■■■ 4.23
CLK2-203ENST00000368361 TRIM41Q8WV44 630 aa41.2■■■■■ 4.19
CLK2-203ENST00000368361 PEG3Q9GZU2 1588 aa41.2■■■■■ 4.19
CLK2-203ENST00000368361 SMARCA2P51531 1590 aa41.17■■■■■ 4.18
CLK2-203ENST00000368361 CCDC88BA6NC98 1476 aa41.16■■■■■ 4.18
CLK2-203ENST00000368361 EIF4G1Q04637 1599 aaKnown RBP41.12■■■■■ 4.17
CLK2-203ENST00000368361 LOC105371045A0A1W2PR82 267 aa40.96■■■■■ 4.15
CLK2-203ENST00000368361 ATAD2BQ9ULI0 1458 aa40.96■■■■■ 4.15
CLK2-203ENST00000368361 BAZ1BQ9UIG0 1483 aaKnown RBP40.78■■■■■ 4.12
CLK2-203ENST00000368361 ABCC8Q09428 1581 aa40.64■■■■■ 4.1
CLK2-203ENST00000368361 FAM9AQ8IZU1 332 aaPredicted RBP40.63■■■■■ 4.09
CLK2-203ENST00000368361 NCAPD3P42695 1498 aa40.41■■■■■ 4.06
CLK2-203ENST00000368361 HMGXB3Q12766 1538 aa40.39■■■■■ 4.06
CLK2-203ENST00000368361 EHMT2Q96KQ7 1210 aa40.17■■■■■ 4.02
CLK2-203ENST00000368361 WRNQ14191 1432 aaPredicted RBP eCLIP40.17■■■■■ 4.02
CLK2-203ENST00000368361 SOGA1O94964 1423 aa40.02■■■■■ 4
CLK2-203ENST00000368361 SYNJ1O43426 1573 aa40.02■■■■■ 4
CLK2-203ENST00000368361 CC2D2AQ9P2K1 1620 aa39.91■■■■□ 3.98
CLK2-203ENST00000368361 PCGF6Q9BYE7 350 aa39.87■■■■□ 3.97
CLK2-203ENST00000368361 RUSC2Q8N2Y8 1516 aa39.86■■■■□ 3.97
CLK2-203ENST00000368361 EEA1Q15075 1411 aa39.85■■■■□ 3.97
CLK2-203ENST00000368361 CFTRP13569 1480 aa39.77■■■■□ 3.96
CLK2-203ENST00000368361 CSRNP3Q8WYN3 585 aa39.72■■■■□ 3.95
CLK2-203ENST00000368361 TOP2BQ02880 1626 aa39.71■■■■□ 3.95
CLK2-203ENST00000368361 BIVM-ERCC5R4GMW8 1640 aa39.63■■■■□ 3.93
CLK2-203ENST00000368361 PRDM2Q13029 1718 aa39.55■■■■□ 3.92
CLK2-203ENST00000368361 TRIM26Q12899 539 aaPredicted RBP39.52■■■■□ 3.92
CLK2-203ENST00000368361 CADPSQ9ULU8 1353 aa39.49■■■■□ 3.91
CLK2-203ENST00000368361 CUX1P39880 1505 aa39.48■■■■□ 3.91
CLK2-203ENST00000368361 TNIKQ9UKE5 1360 aa39.46■■■■□ 3.91
CLK2-203ENST00000368361 GOLGA3Q08378 1498 aa39.44■■■■□ 3.9
CLK2-203ENST00000368361 CEP162Q5TB80 1403 aa39.38■■■■□ 3.9
CLK2-203ENST00000368361 KIF21BO75037 1637 aa39.36■■■■□ 3.89
CLK2-203ENST00000368361 UBTFP17480 764 aaKnown RBP39.36■■■■□ 3.89
CLK2-203ENST00000368361 CEP164Q9UPV0 1460 aa39.35■■■■□ 3.89
CLK2-203ENST00000368361 HRCP23327 699 aa39.23■■■■□ 3.87
CLK2-203ENST00000368361 RAPGEF2Q9Y4G8 1499 aa39.14■■■■□ 3.86
CLK2-203ENST00000368361 FANCD2Q9BXW9 1451 aa39.09■■■■□ 3.85
CLK2-203ENST00000368361 PPARGC1BQ86YN6 1023 aaKnown RBP39.07■■■■□ 3.85
CLK2-203ENST00000368361 NESP48681 1621 aa39.04■■■■□ 3.84
CLK2-203ENST00000368361 KIF27Q86VH2 1401 aa39.04■■■■□ 3.84
CLK2-203ENST00000368361 PRXQ9BXM0 1461 aa38.98■■■■□ 3.83
CLK2-203ENST00000368361 ERICH3Q5RHP9 1530 aa38.94■■■■□ 3.82
CLK2-203ENST00000368361 FGD5Q6ZNL6 1462 aa38.94■■■■□ 3.82
CLK2-203ENST00000368361 DNAJC5BQ9UF47 199 aa38.92■■■■□ 3.82
CLK2-203ENST00000368361 LAMC3Q9Y6N6 1575 aa38.9■■■■□ 3.82
CLK2-203ENST00000368361 CLIP1P30622 1438 aa38.88■■■■□ 3.81
CLK2-203ENST00000368361 CUX2O14529 1486 aa38.84■■■■□ 3.81
CLK2-203ENST00000368361 DNMBPQ6XZF7 1577 aa38.81■■■■□ 3.8
CLK2-203ENST00000368361 TOPBP1Q92547 1522 aa38.74■■■■□ 3.79
CLK2-203ENST00000368361 RANGAP1P46060 587 aaPredicted RBP38.67■■■■□ 3.78
CLK2-203ENST00000368361 IGF1RP08069 1367 aa38.67■■■■□ 3.78
CLK2-203ENST00000368361 POLA1P09884 1462 aaPredicted RBP38.63■■■■□ 3.77
CLK2-203ENST00000368361 VPS8Q8N3P4 1428 aa38.62■■■■□ 3.77
CLK2-203ENST00000368361 TTBK1Q5TCY1 1321 aaPredicted RBP38.62■■■■□ 3.77
CLK2-203ENST00000368361 PDS5BQ9NTI5 1447 aa38.6■■■■□ 3.77
CLK2-203ENST00000368361 RAD54L2Q9Y4B4 1467 aa38.59■■■■□ 3.77
CLK2-203ENST00000368361 URB2Q14146 1524 aaKnown RBP38.58■■■■□ 3.77
CLK2-203ENST00000368361 ABCA10Q8WWZ4 1543 aa38.54■■■■□ 3.76
CLK2-203ENST00000368361 KIF21AQ7Z4S6 1674 aa38.5■■■■□ 3.75
CLK2-203ENST00000368361 CARMIL1Q5VZK9 1371 aa38.48■■■■□ 3.75
CLK2-203ENST00000368361 ARAP1Q96P48 1450 aa38.42■■■■□ 3.74
CLK2-203ENST00000368361 WDR97A6NE52 1622 aa38.35■■■■□ 3.73
CLK2-203ENST00000368361 APLP2Q06481 763 aa38.28■■■■□ 3.72
CLK2-203ENST00000368361 ARHGAP35Q9NRY4 1499 aa38.28■■■■□ 3.72
CLK2-203ENST00000368361 ZEB1P37275 1124 aaPredicted RBP38.21■■■■□ 3.71
CLK2-203ENST00000368361 CUL7Q14999 1698 aa38.21■■■■□ 3.71
CLK2-203ENST00000368361 ABCA5Q8WWZ7 1642 aa38.18■■■■□ 3.7
CLK2-203ENST00000368361 TDRD9Q8NDG6 1382 aaKnown RBP38.15■■■■□ 3.7
CLK2-203ENST00000368361 TARBP1Q13395 1621 aaKnown RBP38.09■■■■□ 3.69
CLK2-203ENST00000368361 GAPVD1Q14C86 1478 aa38.09■■■■□ 3.69
CLK2-203ENST00000368361 MRC2Q9UBG0 1479 aa38.08■■■■□ 3.69
CLK2-203ENST00000368361 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.03■■■■□ 3.68
CLK2-203ENST00000368361 CTTNBP2Q8WZ74 1663 aa37.95■■■■□ 3.67
CLK2-203ENST00000368361 KANK4Q5T7N3 995 aaPredicted RBP37.93■■■■□ 3.66
CLK2-203ENST00000368361 CCER1Q8TC90 406 aaPredicted RBP37.9■■■■□ 3.66
CLK2-203ENST00000368361 WDR62O43379 1518 aa37.85■■■■□ 3.65
CLK2-203ENST00000368361 PBRM1Q86U86 1689 aa37.81■■■■□ 3.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms