RNA–Protein interactions for RNA: ENST00000371019.3

FRAT2-201, Transcript of FRAT2, WNT signaling pathway regulator, humanhuman

APPRIS P1 BASIC

Gene FRAT2, Length 2,213 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRAT2-201ENST00000371019 NISCHQ9Y2I1 1504 aa53.74■■■■■ 6.19
FRAT2-201ENST00000371019 CCDC180Q9P1Z9 1646 aa46.14■■■■■ 4.98
FRAT2-201ENST00000371019 ZCCHC6Q5VYS8 1495 aaKnown RBP45.33■■■■■ 4.85
FRAT2-201ENST00000371019 SHROOM4Q9ULL8 1493 aa44.97■■■■■ 4.79
FRAT2-201ENST00000371019 DCAF8L2P0C7V8 631 aa44.47■■■■■ 4.71
FRAT2-201ENST00000371019 DCAF1Q9Y4B6 1507 aa44.25■■■■■ 4.67
FRAT2-201ENST00000371019 SUPT5HO00267 1087 aaKnown RBP43.79■■■■■ 4.6
FRAT2-201ENST00000371019 MYO15BQ96JP2 1530 aa43.3■■■■■ 4.52
FRAT2-201ENST00000371019 ABCC9O60706 1549 aa43.1■■■■■ 4.49
FRAT2-201ENST00000371019 SCRIBQ14160 1630 aa42.89■■■■■ 4.46
FRAT2-201ENST00000371019 NACADO15069 1562 aa42.82■■■■■ 4.44
FRAT2-201ENST00000371019 CHIC1Q5VXU3 224 aa42.36■■■■■ 4.37
FRAT2-201ENST00000371019 RB1CC1Q8TDY2 1594 aa42.23■■■■■ 4.35
FRAT2-201ENST00000371019 RSF1Q96T23 1441 aaPredicted RBP42.2■■■■■ 4.35
FRAT2-201ENST00000371019 CECR2Q9BXF3 1484 aa41.86■■■■■ 4.29
FRAT2-201ENST00000371019 MROH2BQ7Z745 1585 aa41.67■■■■■ 4.26
FRAT2-201ENST00000371019 UNC13AQ9UPW8 1703 aa41.5■■■■■ 4.23
FRAT2-201ENST00000371019 WIZO95785 1651 aa41.38■■■■■ 4.22
FRAT2-201ENST00000371019 BAZ1AQ9NRL2 1556 aaPredicted RBP41.36■■■■■ 4.21
FRAT2-201ENST00000371019 SMARCA4P51532 1647 aa41.07■■■■■ 4.16
FRAT2-201ENST00000371019 BICRAQ9NZM4 1560 aa41.05■■■■■ 4.16
FRAT2-201ENST00000371019 PABPN1Q86U42 306 aaKnown RBP eCLIP41.01■■■■■ 4.16
FRAT2-201ENST00000371019 TRIM41Q8WV44 630 aa40.97■■■■■ 4.15
FRAT2-201ENST00000371019 LOC105371045A0A1W2PR82 267 aa40.95■■■■■ 4.15
FRAT2-201ENST00000371019 TOP2AP11388 1531 aaKnown RBP40.83■■■■■ 4.13
FRAT2-201ENST00000371019 CCDC88BA6NC98 1476 aa40.59■■■■■ 4.09
FRAT2-201ENST00000371019 EIF4G1Q04637 1599 aaKnown RBP40.59■■■■■ 4.09
FRAT2-201ENST00000371019 SMARCA2P51531 1590 aa40.55■■■■■ 4.08
FRAT2-201ENST00000371019 FAM9AQ8IZU1 332 aaPredicted RBP40.43■■■■■ 4.06
FRAT2-201ENST00000371019 PEG3Q9GZU2 1588 aa40.42■■■■■ 4.06
FRAT2-201ENST00000371019 ATAD2BQ9ULI0 1458 aa40.2■■■■■ 4.03
FRAT2-201ENST00000371019 HRCP23327 699 aa40.18■■■■■ 4.02
FRAT2-201ENST00000371019 PCGF6Q9BYE7 350 aa40.16■■■■■ 4.02
FRAT2-201ENST00000371019 ABCC8Q09428 1581 aa40.14■■■■■ 4.02
FRAT2-201ENST00000371019 BAZ1BQ9UIG0 1483 aaKnown RBP40.01■■■■■ 4
FRAT2-201ENST00000371019 EHMT2Q96KQ7 1210 aa39.97■■■■□ 3.99
FRAT2-201ENST00000371019 TRIM26Q12899 539 aaPredicted RBP39.72■■■■□ 3.95
FRAT2-201ENST00000371019 WRNQ14191 1432 aaPredicted RBP eCLIP39.66■■■■□ 3.94
FRAT2-201ENST00000371019 SOGA1O94964 1423 aa39.64■■■■□ 3.94
FRAT2-201ENST00000371019 NCAPD3P42695 1498 aa39.61■■■■□ 3.93
FRAT2-201ENST00000371019 HMGXB3Q12766 1538 aa39.55■■■■□ 3.92
FRAT2-201ENST00000371019 EEA1Q15075 1411 aa39.5■■■■□ 3.91
FRAT2-201ENST00000371019 RUSC2Q8N2Y8 1516 aa39.46■■■■□ 3.91
FRAT2-201ENST00000371019 SYNJ1O43426 1573 aa39.46■■■■□ 3.91
FRAT2-201ENST00000371019 CSRNP3Q8WYN3 585 aa39.42■■■■□ 3.9
FRAT2-201ENST00000371019 TNIKQ9UKE5 1360 aa39.22■■■■□ 3.87
FRAT2-201ENST00000371019 CEP162Q5TB80 1403 aa39.15■■■■□ 3.86
FRAT2-201ENST00000371019 PPARGC1BQ86YN6 1023 aaKnown RBP39.13■■■■□ 3.85
FRAT2-201ENST00000371019 TOP2BQ02880 1626 aa39.12■■■■□ 3.85
FRAT2-201ENST00000371019 GOLGA3Q08378 1498 aa39.11■■■■□ 3.85
FRAT2-201ENST00000371019 UBTFP17480 764 aaKnown RBP39.09■■■■□ 3.85
FRAT2-201ENST00000371019 CFTRP13569 1480 aa39.05■■■■□ 3.84
FRAT2-201ENST00000371019 BIVM-ERCC5R4GMW8 1640 aa39.01■■■■□ 3.84
FRAT2-201ENST00000371019 CEP164Q9UPV0 1460 aa38.98■■■■□ 3.83
FRAT2-201ENST00000371019 KIF21BO75037 1637 aa38.95■■■■□ 3.83
FRAT2-201ENST00000371019 CC2D2AQ9P2K1 1620 aa38.9■■■■□ 3.82
FRAT2-201ENST00000371019 CUX1P39880 1505 aa38.85■■■■□ 3.81
FRAT2-201ENST00000371019 CADPSQ9ULU8 1353 aa38.75■■■■□ 3.79
FRAT2-201ENST00000371019 RAPGEF2Q9Y4G8 1499 aa38.73■■■■□ 3.79
FRAT2-201ENST00000371019 PRDM2Q13029 1718 aa38.72■■■■□ 3.79
FRAT2-201ENST00000371019 ZEB1P37275 1124 aaPredicted RBP38.69■■■■□ 3.78
FRAT2-201ENST00000371019 CLIP1P30622 1438 aa38.59■■■■□ 3.77
FRAT2-201ENST00000371019 PRXQ9BXM0 1461 aa38.54■■■■□ 3.76
FRAT2-201ENST00000371019 KIF27Q86VH2 1401 aa38.53■■■■□ 3.76
FRAT2-201ENST00000371019 TTBK1Q5TCY1 1321 aaPredicted RBP38.5■■■■□ 3.75
FRAT2-201ENST00000371019 ERICH3Q5RHP9 1530 aa38.49■■■■□ 3.75
FRAT2-201ENST00000371019 VPS8Q8N3P4 1428 aa38.36■■■■□ 3.73
FRAT2-201ENST00000371019 RANGAP1P46060 587 aaPredicted RBP38.34■■■■□ 3.73
FRAT2-201ENST00000371019 FANCD2Q9BXW9 1451 aa38.32■■■■□ 3.73
FRAT2-201ENST00000371019 FGD5Q6ZNL6 1462 aa38.27■■■■□ 3.72
FRAT2-201ENST00000371019 CUX2O14529 1486 aa38.26■■■■□ 3.72
FRAT2-201ENST00000371019 NESP48681 1621 aa38.19■■■■□ 3.7
FRAT2-201ENST00000371019 IGF1RP08069 1367 aa38.18■■■■□ 3.7
FRAT2-201ENST00000371019 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.16■■■■□ 3.7
FRAT2-201ENST00000371019 APLP2Q06481 763 aa38.1■■■■□ 3.69
FRAT2-201ENST00000371019 ARAP1Q96P48 1450 aa38.07■■■■□ 3.68
FRAT2-201ENST00000371019 DNMBPQ6XZF7 1577 aa38.07■■■■□ 3.68
FRAT2-201ENST00000371019 CCER1Q8TC90 406 aaPredicted RBP38.06■■■■□ 3.68
FRAT2-201ENST00000371019 LAMC3Q9Y6N6 1575 aa38.02■■■■□ 3.68
FRAT2-201ENST00000371019 TOPBP1Q92547 1522 aa38.01■■■■□ 3.68
FRAT2-201ENST00000371019 CARMIL1Q5VZK9 1371 aa37.98■■■■□ 3.67
FRAT2-201ENST00000371019 DNAJC5BQ9UF47 199 aa37.96■■■■□ 3.67
FRAT2-201ENST00000371019 POLA1P09884 1462 aaPredicted RBP37.93■■■■□ 3.66
FRAT2-201ENST00000371019 RAD54L2Q9Y4B4 1467 aa37.93■■■■□ 3.66
FRAT2-201ENST00000371019 ABCA10Q8WWZ4 1543 aa37.88■■■■□ 3.65
FRAT2-201ENST00000371019 ARHGAP35Q9NRY4 1499 aa37.88■■■■□ 3.65
FRAT2-201ENST00000371019 URB2Q14146 1524 aaKnown RBP37.81■■■■□ 3.64
FRAT2-201ENST00000371019 PDS5BQ9NTI5 1447 aa37.78■■■■□ 3.64
FRAT2-201ENST00000371019 HNRNPUL2Q1KMD3 747 aaKnown RBP37.72■■■■□ 3.63
FRAT2-201ENST00000371019 KANK4Q5T7N3 995 aaPredicted RBP37.69■■■■□ 3.62
FRAT2-201ENST00000371019 WDR97A6NE52 1622 aa37.58■■■■□ 3.61
FRAT2-201ENST00000371019 KIF21AQ7Z4S6 1674 aa37.58■■■■□ 3.61
FRAT2-201ENST00000371019 CUL7Q14999 1698 aa37.56■■■■□ 3.6
FRAT2-201ENST00000371019 TDRD9Q8NDG6 1382 aaKnown RBP37.5■■■■□ 3.59
FRAT2-201ENST00000371019 ABCA5Q8WWZ7 1642 aa37.45■■■■□ 3.59
FRAT2-201ENST00000371019 GAPVD1Q14C86 1478 aa37.41■■■■□ 3.58
FRAT2-201ENST00000371019 RRBP1Q9P2E9 1410 aaKnown RBP37.38■■■■□ 3.57
FRAT2-201ENST00000371019 MAP3K1Q13233 1512 aa37.37■■■■□ 3.57
FRAT2-201ENST00000371019 P3H3Q8IVL6 736 aa37.37■■■■□ 3.57
FRAT2-201ENST00000371019 FHAD1B1AJZ9 1412 aa37.36■■■■□ 3.57
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms