RNA–Protein interactions for RNA: ENST00000560540.5

SHF-207, Transcript of Src homology 2 domain containing F, humanhuman

TSL 5 BASIC

Gene SHF, Length 2,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-207ENST00000560540 NISCHQ9Y2I1 1504 aa52.65■■■■■ 6.02
SHF-207ENST00000560540 CCDC180Q9P1Z9 1646 aa46.07■■■■■ 4.96
SHF-207ENST00000560540 ABCC9O60706 1549 aa44.17■■■■■ 4.66
SHF-207ENST00000560540 ZCCHC6Q5VYS8 1495 aaKnown RBP44.12■■■■■ 4.65
SHF-207ENST00000560540 DCAF8L2P0C7V8 631 aa43.74■■■■■ 4.59
SHF-207ENST00000560540 DCAF1Q9Y4B6 1507 aa43.46■■■■■ 4.55
SHF-207ENST00000560540 MYO15BQ96JP2 1530 aa43.11■■■■■ 4.49
SHF-207ENST00000560540 NACADO15069 1562 aa43.04■■■■■ 4.48
SHF-207ENST00000560540 RB1CC1Q8TDY2 1594 aa42.8■■■■■ 4.44
SHF-207ENST00000560540 SHROOM4Q9ULL8 1493 aa42.73■■■■■ 4.43
SHF-207ENST00000560540 SCRIBQ14160 1630 aa42.42■■■■■ 4.38
SHF-207ENST00000560540 SUPT5HO00267 1087 aaKnown RBP41.99■■■■■ 4.31
SHF-207ENST00000560540 UNC13AQ9UPW8 1703 aa41.99■■■■■ 4.31
SHF-207ENST00000560540 BICRAQ9NZM4 1560 aa41.6■■■■■ 4.25
SHF-207ENST00000560540 PABPN1Q86U42 306 aaKnown RBP eCLIP41.59■■■■■ 4.25
SHF-207ENST00000560540 CHIC1Q5VXU3 224 aa41.19■■■■■ 4.18
SHF-207ENST00000560540 CECR2Q9BXF3 1484 aa41.04■■■■■ 4.16
SHF-207ENST00000560540 MROH2BQ7Z745 1585 aa40.71■■■■■ 4.11
SHF-207ENST00000560540 RSF1Q96T23 1441 aaPredicted RBP40.68■■■■■ 4.1
SHF-207ENST00000560540 BAZ1AQ9NRL2 1556 aaPredicted RBP40.66■■■■■ 4.1
SHF-207ENST00000560540 SMARCA4P51532 1647 aa40.58■■■■■ 4.09
SHF-207ENST00000560540 HRCP23327 699 aa40.54■■■■■ 4.08
SHF-207ENST00000560540 EIF4G1Q04637 1599 aaKnown RBP40.37■■■■■ 4.05
SHF-207ENST00000560540 WIZO95785 1651 aa40.35■■■■■ 4.05
SHF-207ENST00000560540 PCGF6Q9BYE7 350 aa40.09■■■■■ 4.01
SHF-207ENST00000560540 PEG3Q9GZU2 1588 aa40.07■■■■■ 4
SHF-207ENST00000560540 ATAD2BQ9ULI0 1458 aa40.05■■■■■ 4
SHF-207ENST00000560540 SMARCA2P51531 1590 aa39.96■■■■□ 3.99
SHF-207ENST00000560540 CC2D2AQ9P2K1 1620 aa39.91■■■■□ 3.98
SHF-207ENST00000560540 TOP2AP11388 1531 aaKnown RBP39.85■■■■□ 3.97
SHF-207ENST00000560540 BAZ1BQ9UIG0 1483 aaKnown RBP39.78■■■■□ 3.96
SHF-207ENST00000560540 LOC105371045A0A1W2PR82 267 aa39.77■■■■□ 3.96
SHF-207ENST00000560540 NCAPD3P42695 1498 aa39.76■■■■□ 3.96
SHF-207ENST00000560540 DNAJC5BQ9UF47 199 aa39.7■■■■□ 3.95
SHF-207ENST00000560540 HMGXB3Q12766 1538 aa39.64■■■■□ 3.94
SHF-207ENST00000560540 CCDC88BA6NC98 1476 aa39.49■■■■□ 3.91
SHF-207ENST00000560540 TRIM26Q12899 539 aaPredicted RBP39.47■■■■□ 3.91
SHF-207ENST00000560540 PPARGC1BQ86YN6 1023 aaKnown RBP39.36■■■■□ 3.89
SHF-207ENST00000560540 TRIM41Q8WV44 630 aa39.23■■■■□ 3.87
SHF-207ENST00000560540 ZEB1P37275 1124 aaPredicted RBP38.88■■■■□ 3.82
SHF-207ENST00000560540 CFTRP13569 1480 aa38.76■■■■□ 3.79
SHF-207ENST00000560540 CADPSQ9ULU8 1353 aa38.73■■■■□ 3.79
SHF-207ENST00000560540 FAM9AQ8IZU1 332 aaPredicted RBP38.71■■■■□ 3.79
SHF-207ENST00000560540 NESP48681 1621 aa38.64■■■■□ 3.78
SHF-207ENST00000560540 ABCC8Q09428 1581 aa38.54■■■■□ 3.76
SHF-207ENST00000560540 LAMC3Q9Y6N6 1575 aa38.47■■■■□ 3.75
SHF-207ENST00000560540 PRDM2Q13029 1718 aa38.46■■■■□ 3.75
SHF-207ENST00000560540 FANCD2Q9BXW9 1451 aa38.31■■■■□ 3.72
SHF-207ENST00000560540 WRNQ14191 1432 aaPredicted RBP eCLIP38.29■■■■□ 3.72
SHF-207ENST00000560540 PDS5BQ9NTI5 1447 aa38.2■■■■□ 3.71
SHF-207ENST00000560540 EHMT2Q96KQ7 1210 aa38.19■■■■□ 3.7
SHF-207ENST00000560540 SYNJ1O43426 1573 aa38.19■■■■□ 3.7
SHF-207ENST00000560540 KIF21AQ7Z4S6 1674 aa38.11■■■■□ 3.69
SHF-207ENST00000560540 CEP164Q9UPV0 1460 aa38.1■■■■□ 3.69
SHF-207ENST00000560540 CUX1P39880 1505 aa38.08■■■■□ 3.69
SHF-207ENST00000560540 TOP2BQ02880 1626 aa38.01■■■■□ 3.68
SHF-207ENST00000560540 BIVM-ERCC5R4GMW8 1640 aa37.97■■■■□ 3.67
SHF-207ENST00000560540 URB2Q14146 1524 aaKnown RBP37.89■■■■□ 3.66
SHF-207ENST00000560540 EEA1Q15075 1411 aa37.87■■■■□ 3.65
SHF-207ENST00000560540 ERCC6Q03468 1493 aa37.86■■■■□ 3.65
SHF-207ENST00000560540 DNMBPQ6XZF7 1577 aa37.84■■■■□ 3.65
SHF-207ENST00000560540 TOPBP1Q92547 1522 aa37.84■■■■□ 3.65
SHF-207ENST00000560540 CEP162Q5TB80 1403 aa37.79■■■■□ 3.64
SHF-207ENST00000560540 TNIKQ9UKE5 1360 aa37.76■■■■□ 3.64
SHF-207ENST00000560540 MRC2Q9UBG0 1479 aa37.75■■■■□ 3.63
SHF-207ENST00000560540 FGD5Q6ZNL6 1462 aa37.74■■■■□ 3.63
SHF-207ENST00000560540 SOGA1O94964 1423 aa37.71■■■■□ 3.63
SHF-207ENST00000560540 POLA1P09884 1462 aaPredicted RBP37.64■■■■□ 3.62
SHF-207ENST00000560540 CCER1Q8TC90 406 aaPredicted RBP37.63■■■■□ 3.61
SHF-207ENST00000560540 RUSC2Q8N2Y8 1516 aa37.63■■■■□ 3.61
SHF-207ENST00000560540 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.62■■■■□ 3.61
SHF-207ENST00000560540 THOC2Q8NI27 1593 aaKnown RBP37.6■■■■□ 3.61
SHF-207ENST00000560540 WDR62O43379 1518 aa37.57■■■■□ 3.61
SHF-207ENST00000560540 RAD54L2Q9Y4B4 1467 aa37.55■■■■□ 3.6
SHF-207ENST00000560540 GOLGA3Q08378 1498 aa37.53■■■■□ 3.6
SHF-207ENST00000560540 CSRNP3Q8WYN3 585 aa37.52■■■■□ 3.6
SHF-207ENST00000560540 SCAF1Q9H7N4 1312 aaKnown RBP37.44■■■■□ 3.58
SHF-207ENST00000560540 CUX2O14529 1486 aa37.4■■■■□ 3.58
SHF-207ENST00000560540 KIF21BO75037 1637 aa37.38■■■■□ 3.57
SHF-207ENST00000560540 ABCA10Q8WWZ4 1543 aa37.35■■■■□ 3.57
SHF-207ENST00000560540 PELP1Q8IZL8 1130 aaKnown RBP37.35■■■■□ 3.57
SHF-207ENST00000560540 KIF27Q86VH2 1401 aa37.33■■■■□ 3.57
SHF-207ENST00000560540 TARBP1Q13395 1621 aaKnown RBP37.32■■■■□ 3.56
SHF-207ENST00000560540 WDR97A6NE52 1622 aa37.28■■■■□ 3.56
SHF-207ENST00000560540 UBTFP17480 764 aaKnown RBP37.27■■■■□ 3.56
SHF-207ENST00000560540 TDRD9Q8NDG6 1382 aaKnown RBP37.23■■■■□ 3.55
SHF-207ENST00000560540 IFT140Q96RY7 1462 aa37.2■■■■□ 3.54
SHF-207ENST00000560540 TTBK1Q5TCY1 1321 aaPredicted RBP37.13■■■■□ 3.53
SHF-207ENST00000560540 ZNF608Q9ULD9 1512 aaPredicted RBP37.12■■■■□ 3.53
SHF-207ENST00000560540 DIEXFQ68CQ4 756 aaKnown RBP37.11■■■■□ 3.53
SHF-207ENST00000560540 IGF1RP08069 1367 aa37.1■■■■□ 3.53
SHF-207ENST00000560540 ABCA5Q8WWZ7 1642 aa37.1■■■■□ 3.53
SHF-207ENST00000560540 ACIN1Q9UKV3 1341 aaKnown RBP37.08■■■■□ 3.53
SHF-207ENST00000560540 AQRO60306 1485 aaKnown RBP eCLIP37.07■■■■□ 3.533e-9■■■■■ 36.3
SHF-207ENST00000560540 GAPVD1Q14C86 1478 aa37.06■■■■□ 3.52
SHF-207ENST00000560540 CLIP1P30622 1438 aa37.01■■■■□ 3.51
SHF-207ENST00000560540 PRXQ9BXM0 1461 aa36.98■■■■□ 3.51
SHF-207ENST00000560540 VPS8Q8N3P4 1428 aa36.97■■■■□ 3.51
SHF-207ENST00000560540 RAPGEF2Q9Y4G8 1499 aa36.95■■■■□ 3.51
SHF-207ENST00000560540 EIF4G3O43432 1585 aaKnown RBP36.92■■■■□ 3.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms