RNA–Protein interactions for RNA: ENST00000253270.11

SLC35D2-201, Transcript of solute carrier family 35 member D2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC35D2, Length 1,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC35D2-201ENST00000253270 NISCHQ9Y2I1 1504 aa59.99■■■■■ 7.19
SLC35D2-201ENST00000253270 CCDC180Q9P1Z9 1646 aa52.76■■■■■ 6.04
SLC35D2-201ENST00000253270 ABCC9O60706 1549 aa50.63■■■■■ 5.7
SLC35D2-201ENST00000253270 ZCCHC6Q5VYS8 1495 aaKnown RBP50.2■■■■■ 5.63
SLC35D2-201ENST00000253270 DCAF8L2P0C7V8 631 aa49.85■■■■■ 5.57
SLC35D2-201ENST00000253270 DCAF1Q9Y4B6 1507 aa49.63■■■■■ 5.54
SLC35D2-201ENST00000253270 MYO15BQ96JP2 1530 aa49.4■■■■■ 5.5
SLC35D2-201ENST00000253270 NACADO15069 1562 aa49.37■■■■■ 5.49
SLC35D2-201ENST00000253270 RB1CC1Q8TDY2 1594 aa49.16■■■■■ 5.46
SLC35D2-201ENST00000253270 SCRIBQ14160 1630 aa48.33■■■■■ 5.33
SLC35D2-201ENST00000253270 SHROOM4Q9ULL8 1493 aa48.24■■■■■ 5.31
SLC35D2-201ENST00000253270 UNC13AQ9UPW8 1703 aa48.05■■■■■ 5.28
SLC35D2-201ENST00000253270 BICRAQ9NZM4 1560 aa47.59■■■■■ 5.21
SLC35D2-201ENST00000253270 PABPN1Q86U42 306 aaKnown RBP eCLIP47.56■■■■■ 5.26e-6■■■■□ 21.1
SLC35D2-201ENST00000253270 CECR2Q9BXF3 1484 aa46.63■■■■■ 5.05
SLC35D2-201ENST00000253270 BAZ1AQ9NRL2 1556 aaPredicted RBP46.42■■■■■ 5.02
SLC35D2-201ENST00000253270 SMARCA4P51532 1647 aa46.29■■■■■ 5
SLC35D2-201ENST00000253270 EIF4G1Q04637 1599 aaKnown RBP46.28■■■■■ 5
SLC35D2-201ENST00000253270 MROH2BQ7Z745 1585 aa46.27■■■■■ 5
SLC35D2-201ENST00000253270 RSF1Q96T23 1441 aaPredicted RBP46.17■■■■■ 4.98
SLC35D2-201ENST00000253270 SUPT5HO00267 1087 aaKnown RBP46.03■■■■■ 4.96
SLC35D2-201ENST00000253270 WIZO95785 1651 aa45.84■■■■■ 4.93
SLC35D2-201ENST00000253270 CC2D2AQ9P2K1 1620 aa45.81■■■■■ 4.92
SLC35D2-201ENST00000253270 PEG3Q9GZU2 1588 aa45.78■■■■■ 4.92
SLC35D2-201ENST00000253270 SMARCA2P51531 1590 aa45.76■■■■■ 4.92
SLC35D2-201ENST00000253270 ATAD2BQ9ULI0 1458 aa45.76■■■■■ 4.92
SLC35D2-201ENST00000253270 NCAPD3P42695 1498 aa45.54■■■■■ 4.88
SLC35D2-201ENST00000253270 BAZ1BQ9UIG0 1483 aaKnown RBP45.48■■■■■ 4.87
SLC35D2-201ENST00000253270 DNAJC5BQ9UF47 199 aa45.41■■■■■ 4.86
SLC35D2-201ENST00000253270 HMGXB3Q12766 1538 aa45.41■■■■■ 4.86
SLC35D2-201ENST00000253270 TOP2AP11388 1531 aaKnown RBP45.39■■■■■ 4.86
SLC35D2-201ENST00000253270 CCDC88BA6NC98 1476 aa44.89■■■■■ 4.78
SLC35D2-201ENST00000253270 CADPSQ9ULU8 1353 aa44.32■■■■■ 4.69
SLC35D2-201ENST00000253270 CFTRP13569 1480 aa44.27■■■■■ 4.68
SLC35D2-201ENST00000253270 LAMC3Q9Y6N6 1575 aa44.16■■■■■ 4.66
SLC35D2-201ENST00000253270 NESP48681 1621 aa44.14■■■■■ 4.66
SLC35D2-201ENST00000253270 PRDM2Q13029 1718 aa44.01■■■■■ 4.64
SLC35D2-201ENST00000253270 PDS5BQ9NTI5 1447 aa43.87■■■■■ 4.61
SLC35D2-201ENST00000253270 FANCD2Q9BXW9 1451 aa43.81■■■■■ 4.6
SLC35D2-201ENST00000253270 CEP164Q9UPV0 1460 aa43.65■■■■■ 4.58
SLC35D2-201ENST00000253270 KIF21AQ7Z4S6 1674 aa43.63■■■■■ 4.57
SLC35D2-201ENST00000253270 ABCC8Q09428 1581 aa43.62■■■■■ 4.57
SLC35D2-201ENST00000253270 CHIC1Q5VXU3 224 aa43.58■■■■■ 4.57
SLC35D2-201ENST00000253270 ERCC6Q03468 1493 aa43.56■■■■■ 4.56
SLC35D2-201ENST00000253270 WRNQ14191 1432 aaPredicted RBP eCLIP43.53■■■■■ 4.56
SLC35D2-201ENST00000253270 TRIM41Q8WV44 630 aa43.4■■■■■ 4.54
SLC35D2-201ENST00000253270 CUX1P39880 1505 aa43.33■■■■■ 4.53
SLC35D2-201ENST00000253270 MRC2Q9UBG0 1479 aa43.32■■■■■ 4.53
SLC35D2-201ENST00000253270 SYNJ1O43426 1573 aa43.32■■■■■ 4.53
SLC35D2-201ENST00000253270 URB2Q14146 1524 aaKnown RBP43.28■■■■■ 4.52
SLC35D2-201ENST00000253270 DNMBPQ6XZF7 1577 aa43.26■■■■■ 4.52
SLC35D2-201ENST00000253270 TOP2BQ02880 1626 aa43.26■■■■■ 4.52
SLC35D2-201ENST00000253270 TOPBP1Q92547 1522 aa43.23■■■■■ 4.51
SLC35D2-201ENST00000253270 BIVM-ERCC5R4GMW8 1640 aa43.23■■■■■ 4.51
SLC35D2-201ENST00000253270 THOC2Q8NI27 1593 aaKnown RBP43.15■■■■■ 4.5
SLC35D2-201ENST00000253270 WDR62O43379 1518 aa43.11■■■■■ 4.49
SLC35D2-201ENST00000253270 FGD5Q6ZNL6 1462 aa43.02■■■■■ 4.48
SLC35D2-201ENST00000253270 POLA1P09884 1462 aaPredicted RBP42.94■■■■■ 4.46
SLC35D2-201ENST00000253270 SOGA1O94964 1423 aa42.82■■■■■ 4.45
SLC35D2-201ENST00000253270 RAD54L2Q9Y4B4 1467 aa42.77■■■■■ 4.44
SLC35D2-201ENST00000253270 CUX2O14529 1486 aa42.74■■■■■ 4.43
SLC35D2-201ENST00000253270 IFT140Q96RY7 1462 aa42.67■■■■■ 4.42
SLC35D2-201ENST00000253270 ABCA10Q8WWZ4 1543 aa42.64■■■■■ 4.42
SLC35D2-201ENST00000253270 TARBP1Q13395 1621 aaKnown RBP42.64■■■■■ 4.42
SLC35D2-201ENST00000253270 WDR97A6NE52 1622 aa42.54■■■■■ 4.4
SLC35D2-201ENST00000253270 KIF27Q86VH2 1401 aa42.53■■■■■ 4.4
SLC35D2-201ENST00000253270 FAM9AQ8IZU1 332 aaPredicted RBP42.51■■■■■ 4.4
SLC35D2-201ENST00000253270 RUSC2Q8N2Y8 1516 aa42.5■■■■■ 4.39
SLC35D2-201ENST00000253270 EEA1Q15075 1411 aa42.47■■■■■ 4.39
SLC35D2-201ENST00000253270 TDRD9Q8NDG6 1382 aaKnown RBP42.46■■■■■ 4.39
SLC35D2-201ENST00000253270 ZNF608Q9ULD9 1512 aaPredicted RBP42.39■■■■■ 4.38
SLC35D2-201ENST00000253270 ABCA5Q8WWZ7 1642 aa42.34■■■■■ 4.37
SLC35D2-201ENST00000253270 AQRO60306 1485 aaKnown RBP eCLIP42.33■■■■■ 4.375e-7■■■■■ 32.6
SLC35D2-201ENST00000253270 GAPVD1Q14C86 1478 aa42.33■■■■■ 4.37
SLC35D2-201ENST00000253270 CSRNP3Q8WYN3 585 aa42.31■■■■■ 4.36
SLC35D2-201ENST00000253270 EIF4G3O43432 1585 aaKnown RBP42.25■■■■■ 4.35
SLC35D2-201ENST00000253270 IGF1RP08069 1367 aa42.21■■■■■ 4.35
SLC35D2-201ENST00000253270 GRIN2BQ13224 1484 aa42.15■■■■■ 4.34
SLC35D2-201ENST00000253270 ERICH3Q5RHP9 1530 aa42.15■■■■■ 4.34
SLC35D2-201ENST00000253270 PBRM1Q86U86 1689 aa42.14■■■■■ 4.34
SLC35D2-201ENST00000253270 CARMIL1Q5VZK9 1371 aa42■■■■■ 4.31
SLC35D2-201ENST00000253270 CUL7Q14999 1698 aa41.99■■■■■ 4.31
SLC35D2-201ENST00000253270 PRXQ9BXM0 1461 aa41.96■■■■■ 4.31
SLC35D2-201ENST00000253270 SNAPC4Q5SXM2 1469 aa41.94■■■■■ 4.3
SLC35D2-201ENST00000253270 KIF21BO75037 1637 aa41.92■■■■■ 4.3
SLC35D2-201ENST00000253270 EHMT2Q96KQ7 1210 aa41.91■■■■■ 4.3
SLC35D2-201ENST00000253270 MAGI1Q96QZ7 1491 aaPredicted RBP41.9■■■■■ 4.3
SLC35D2-201ENST00000253270 FHAD1B1AJZ9 1412 aa41.88■■■■■ 4.29
SLC35D2-201ENST00000253270 RAPGEF2Q9Y4G8 1499 aa41.87■■■■■ 4.29
SLC35D2-201ENST00000253270 ADAMTS12P58397 1594 aa41.86■■■■■ 4.29
SLC35D2-201ENST00000253270 LOC105371045A0A1W2PR82 267 aa41.84■■■■■ 4.29
SLC35D2-201ENST00000253270 GOLGA3Q08378 1498 aa41.81■■■■■ 4.28
SLC35D2-201ENST00000253270 SYNJ2O15056 1496 aa41.74■■■■■ 4.27
SLC35D2-201ENST00000253270 CHMP7Q8WUX9 453 aaPredicted RBP41.72■■■■■ 4.27
SLC35D2-201ENST00000253270 UBTFP17480 764 aaKnown RBP41.7■■■■■ 4.27
SLC35D2-201ENST00000253270 FBLN2P98095 1184 aa41.7■■■■■ 4.27
SLC35D2-201ENST00000253270 GRIN2AQ12879 1464 aa41.61■■■■■ 4.25
SLC35D2-201ENST00000253270 CHD1O14646 1710 aa41.51■■■■■ 4.24
SLC35D2-201ENST00000253270 TNIKQ9UKE5 1360 aa41.51■■■■■ 4.24
SLC35D2-201ENST00000253270 CTTNBP2Q8WZ74 1663 aa41.38■■■■■ 4.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms