RNA–Protein interactions for RNA: ENST00000393359.6

TGFBRAP1-202, Transcript of transforming growth factor beta receptor associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFBRAP1, Length 5,979 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBRAP1-202ENST00000393359 DCAF8L2P0C7V8 631 aa39.24■■■■□ 3.87
TGFBRAP1-202ENST00000393359 SUPT5HO00267 1087 aaKnown RBP37.47■■■■□ 3.59
TGFBRAP1-202ENST00000393359 EHMT2Q96KQ7 1210 aa37.02■■■■□ 3.52
TGFBRAP1-202ENST00000393359 PELP1Q8IZL8 1130 aaKnown RBP36.63■■■■□ 3.45
TGFBRAP1-202ENST00000393359 SHROOM4Q9ULL8 1493 aa36.61■■■■□ 3.45
TGFBRAP1-202ENST00000393359 TTBK1Q5TCY1 1321 aaPredicted RBP35.82■■■■□ 3.32
TGFBRAP1-202ENST00000393359 APLP2Q06481 763 aa35.81■■■■□ 3.32
TGFBRAP1-202ENST00000393359 FAM9AQ8IZU1 332 aaPredicted RBP35.57■■■■□ 3.29
TGFBRAP1-202ENST00000393359 PCGF6Q9BYE7 350 aa35.53■■■■□ 3.28
TGFBRAP1-202ENST00000393359 ERICH6Q7L0X2 663 aa35.51■■■■□ 3.27
TGFBRAP1-202ENST00000393359 NISCHQ9Y2I1 1504 aa35.49■■■■□ 3.27
TGFBRAP1-202ENST00000393359 CENPBP07199 599 aaPredicted RBP35.15■■■■□ 3.22
TGFBRAP1-202ENST00000393359 RANGAP1P46060 587 aaPredicted RBP35.13■■■■□ 3.21
TGFBRAP1-202ENST00000393359 CCER1Q8TC90 406 aaPredicted RBP35■■■■□ 3.19
TGFBRAP1-202ENST00000393359 YTHDC1Q96MU7 727 aaKnown RBP34.79■■■■□ 3.16
TGFBRAP1-202ENST00000393359 ATP1B4Q9UN42 357 aaPredicted RBP34.72■■■■□ 3.15
TGFBRAP1-202ENST00000393359 ZEB1P37275 1124 aaPredicted RBP34.69■■■■□ 3.14
TGFBRAP1-202ENST00000393359 NEFLP07196 543 aa34.5■■■■□ 3.11
TGFBRAP1-202ENST00000393359 TRIM41Q8WV44 630 aa34.44■■■■□ 3.1
TGFBRAP1-202ENST00000393359 UBTFP17480 764 aaKnown RBP34.25■■■■□ 3.07
TGFBRAP1-202ENST00000393359 PPARGC1BQ86YN6 1023 aaKnown RBP34.23■■■■□ 3.07
TGFBRAP1-202ENST00000393359 MYT1Q01538 1121 aa34.15■■■■□ 3.06
TGFBRAP1-202ENST00000393359 DAXXQ9UER7 740 aaPredicted RBP33.73■■■□□ 2.99
TGFBRAP1-202ENST00000393359 POLR3GLQ9BT43 218 aa33.7■■■□□ 2.99
TGFBRAP1-202ENST00000393359 ITGAEP38570 1179 aa33.59■■■□□ 2.97
TGFBRAP1-202ENST00000393359 TRIM26Q12899 539 aaPredicted RBP33.56■■■□□ 2.96
TGFBRAP1-202ENST00000393359 CNGB1Q14028 1251 aaPredicted RBP33.56■■■□□ 2.96
TGFBRAP1-202ENST00000393359 HRCP23327 699 aa33.51■■■□□ 2.95
TGFBRAP1-202ENST00000393359 MYT1LQ9UL68 1186 aa33.33■■■□□ 2.93
TGFBRAP1-202ENST00000393359 HNRNPUL2Q1KMD3 747 aaKnown RBP33.23■■■□□ 2.91
TGFBRAP1-202ENST00000393359 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.21■■■□□ 2.91
TGFBRAP1-202ENST00000393359 LOC105371045A0A1W2PR82 267 aa33.14■■■□□ 2.9
TGFBRAP1-202ENST00000393359 CHIC1Q5VXU3 224 aa33.06■■■□□ 2.88
TGFBRAP1-202ENST00000393359 ZNF316A6NFI3 1004 aaPredicted RBP33■■■□□ 2.87
TGFBRAP1-202ENST00000393359 SLC4A1APQ9BWU0 796 aaKnown RBP32.99■■■□□ 2.87
TGFBRAP1-202ENST00000393359 RTL5Q5HYW3 569 aaPredicted RBP32.98■■■□□ 2.87
TGFBRAP1-202ENST00000393359 CLSPNQ9HAW4 1339 aa32.9■■■□□ 2.86
TGFBRAP1-202ENST00000393359 DIEXFQ68CQ4 756 aaKnown RBP32.82■■■□□ 2.84
TGFBRAP1-202ENST00000393359 BCANQ96GW7 911 aa32.74■■■□□ 2.83
TGFBRAP1-202ENST00000393359 FAM50AQ14320 339 aaKnown RBP32.48■■■□□ 2.79
TGFBRAP1-202ENST00000393359 NEUROD1Q13562 356 aa32.45■■■□□ 2.79
TGFBRAP1-202ENST00000393359 GTF3C3Q9Y5Q9 886 aa32.45■■■□□ 2.79
TGFBRAP1-202ENST00000393359 TRIM52Q96A61 297 aa32.38■■■□□ 2.77
TGFBRAP1-202ENST00000393359 BCL11AQ9H165 835 aa32.24■■■□□ 2.75
TGFBRAP1-202ENST00000393359 CDK11AQ9UQ88 783 aaPredicted RBP32.22■■■□□ 2.75
TGFBRAP1-202ENST00000393359 ZNF326Q5BKZ1 582 aaKnown RBP32.2■■■□□ 2.75
TGFBRAP1-202ENST00000393359 ANP32CO43423 234 aa32.13■■■□□ 2.73
TGFBRAP1-202ENST00000393359 ZBTB47Q9UFB7 747 aaPredicted RBP32.04■■■□□ 2.72
TGFBRAP1-202ENST00000393359 CANXP27824 592 aaKnown RBP31.97■■■□□ 2.71
TGFBRAP1-202ENST00000393359 SLC24A1O60721 1099 aa31.96■■■□□ 2.71
TGFBRAP1-202ENST00000393359 NPM2Q86SE8 214 aaKnown RBP31.85■■■□□ 2.69
TGFBRAP1-202ENST00000393359 ANP32AP39687 249 aaKnown RBP31.72■■■□□ 2.67
TGFBRAP1-202ENST00000393359 ACIN1Q9UKV3 1341 aaKnown RBP31.7■■■□□ 2.67
TGFBRAP1-202ENST00000393359 EIF5BO60841 1220 aaKnown RBP31.62■■■□□ 2.65
TGFBRAP1-202ENST00000393359 ARID3CA6NKF2 412 aa31.56■■■□□ 2.64
TGFBRAP1-202ENST00000393359 NEFMP07197 916 aa31.49■■■□□ 2.63
TGFBRAP1-202ENST00000393359 FBLN2P98095 1184 aa31.48■■■□□ 2.63
TGFBRAP1-202ENST00000393359 PABPN1Q86U42 306 aaKnown RBP eCLIP31.47■■■□□ 2.63
TGFBRAP1-202ENST00000393359 FKBP8Q14318 412 aa31.47■■■□□ 2.63
TGFBRAP1-202ENST00000393359 P3H3Q8IVL6 736 aa31.45■■■□□ 2.63
TGFBRAP1-202ENST00000393359 ANP32BQ92688 251 aaKnown RBP31.3■■■□□ 2.6
TGFBRAP1-202ENST00000393359 HSP90AA1P07900 732 aaKnown RBP31.3■■■□□ 2.6
TGFBRAP1-202ENST00000393359 ZNF777Q9ULD5 760 aaPredicted RBP31.28■■■□□ 2.6
TGFBRAP1-202ENST00000393359 NBR1Q14596 966 aa31.24■■■□□ 2.59
TGFBRAP1-202ENST00000393359 SALL2Q9Y467 1007 aaPredicted RBP31.21■■■□□ 2.59
TGFBRAP1-202ENST00000393359 ARXQ96QS3 562 aa31.2■■■□□ 2.59
TGFBRAP1-202ENST00000393359 FAM9BQ8IZU0 186 aa31.19■■■□□ 2.58
TGFBRAP1-202ENST00000393359 HNRNPUQ00839 825 aaKnown RBP eCLIP31.18■■■□□ 2.58
TGFBRAP1-202ENST00000393359 UPF2Q9HAU5 1272 aaKnown RBP31.07■■■□□ 2.56
TGFBRAP1-202ENST00000393359 DDX10Q13206 875 aaKnown RBP31.06■■■□□ 2.56
TGFBRAP1-202ENST00000393359 ABCC9O60706 1549 aa31.01■■■□□ 2.55
TGFBRAP1-202ENST00000393359 CHGAP10645 457 aaKnown RBP30.98■■■□□ 2.55
TGFBRAP1-202ENST00000393359 TONSLQ96HA7 1378 aa30.98■■■□□ 2.55
TGFBRAP1-202ENST00000393359 CCDC136Q96JN2 1154 aa30.92■■■□□ 2.54
TGFBRAP1-202ENST00000393359 GLIPR1L2Q4G1C9 344 aa30.92■■■□□ 2.54
TGFBRAP1-202ENST00000393359 PLPPR3Q6T4P5 718 aa30.91■■■□□ 2.54
TGFBRAP1-202ENST00000393359 IRX6P78412 446 aaPredicted RBP30.91■■■□□ 2.54
TGFBRAP1-202ENST00000393359 CSRNP3Q8WYN3 585 aa30.89■■■□□ 2.54
TGFBRAP1-202ENST00000393359 STAG3Q9UJ98 1225 aa30.79■■■□□ 2.52
TGFBRAP1-202ENST00000393359 TMC1Q8TDI8 760 aa30.76■■■□□ 2.52
TGFBRAP1-202ENST00000393359 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.72■■■□□ 2.51
TGFBRAP1-202ENST00000393359 ESF1Q9H501 851 aaKnown RBP30.71■■■□□ 2.51
TGFBRAP1-202ENST00000393359 CHIC2Q9UKJ5 165 aa30.7■■■□□ 2.51
TGFBRAP1-202ENST00000393359 SCAF1Q9H7N4 1312 aaKnown RBP30.69■■■□□ 2.5
TGFBRAP1-202ENST00000393359 WDR43Q15061 677 aaKnown RBP eCLIP30.67■■■□□ 2.5
TGFBRAP1-202ENST00000393359 HIRIP3Q9BW71 556 aaPredicted RBP30.66■■■□□ 2.5
TGFBRAP1-202ENST00000393359 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.66■■■□□ 2.52e-6■■■■□ 26.5
TGFBRAP1-202ENST00000393359 MRS2Q9HD23 443 aa30.65■■■□□ 2.5
TGFBRAP1-202ENST00000393359 KDM2AQ9Y2K7 1162 aa30.6■■■□□ 2.49
TGFBRAP1-202ENST00000393359 MIER1Q8N108 512 aa30.59■■■□□ 2.49
TGFBRAP1-202ENST00000393359 SENP3Q9H4L4 574 aaPredicted RBP30.49■■■□□ 2.47
TGFBRAP1-202ENST00000393359 SENP3-EIF4A1A0A087X0R7 540 aa30.48■■■□□ 2.47
TGFBRAP1-202ENST00000393359 MYH16Q9H6N6 1097 aa30.42■■■□□ 2.46
TGFBRAP1-202ENST00000393359 PLEKHG5O94827 1062 aa30.38■■■□□ 2.45
TGFBRAP1-202ENST00000393359 ZBTB7CA1YPR0 619 aa30.35■■■□□ 2.45
TGFBRAP1-202ENST00000393359 DCAF1Q9Y4B6 1507 aa30.35■■■□□ 2.45
TGFBRAP1-202ENST00000393359 TPRNQ4KMQ1 711 aa30.35■■■□□ 2.45
TGFBRAP1-202ENST00000393359 TRIM44Q96DX7 344 aaPredicted RBP30.35■■■□□ 2.45
TGFBRAP1-202ENST00000393359 A0A0G2JS52 829 aa30.34■■■□□ 2.45
TGFBRAP1-202ENST00000393359 CDK11BP21127 795 aaKnown RBP30.32■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms