RNA–Protein interactions for RNA: ENST00000328741.5

NXPH3-201, Transcript of neurexophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXPH3, Length 2,179 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXPH3-201ENST00000328741 NISCHQ9Y2I1 1504 aa52.95■■■■■ 6.07
NXPH3-201ENST00000328741 CCDC180Q9P1Z9 1646 aa45.45■■■■■ 4.87
NXPH3-201ENST00000328741 ZCCHC6Q5VYS8 1495 aaKnown RBP44.72■■■■■ 4.75
NXPH3-201ENST00000328741 SHROOM4Q9ULL8 1493 aa44.41■■■■■ 4.7
NXPH3-201ENST00000328741 DCAF8L2P0C7V8 631 aa43.62■■■■■ 4.57
NXPH3-201ENST00000328741 DCAF1Q9Y4B6 1507 aa43.6■■■■■ 4.57
NXPH3-201ENST00000328741 SUPT5HO00267 1087 aaKnown RBP43.29■■■■■ 4.52
NXPH3-201ENST00000328741 MYO15BQ96JP2 1530 aa42.56■■■■■ 4.4
NXPH3-201ENST00000328741 SCRIBQ14160 1630 aa42.26■■■■■ 4.36
NXPH3-201ENST00000328741 ABCC9O60706 1549 aa42.21■■■■■ 4.35
NXPH3-201ENST00000328741 NACADO15069 1562 aa42.05■■■■■ 4.32
NXPH3-201ENST00000328741 CHIC1Q5VXU3 224 aa41.98■■■■■ 4.31
NXPH3-201ENST00000328741 RSF1Q96T23 1441 aaPredicted RBP41.62■■■■■ 4.25
NXPH3-201ENST00000328741 RB1CC1Q8TDY2 1594 aa41.44■■■■■ 4.22
NXPH3-201ENST00000328741 CECR2Q9BXF3 1484 aa41.23■■■■■ 4.19
NXPH3-201ENST00000328741 MROH2BQ7Z745 1585 aa41.09■■■■■ 4.17
NXPH3-201ENST00000328741 UNC13AQ9UPW8 1703 aa40.91■■■■■ 4.14
NXPH3-201ENST00000328741 WIZO95785 1651 aa40.86■■■■■ 4.13
NXPH3-201ENST00000328741 BAZ1AQ9NRL2 1556 aaPredicted RBP40.74■■■■■ 4.11
NXPH3-201ENST00000328741 LOC105371045A0A1W2PR82 267 aa40.59■■■■■ 4.09
NXPH3-201ENST00000328741 SMARCA4P51532 1647 aa40.48■■■■■ 4.07
NXPH3-201ENST00000328741 TRIM41Q8WV44 630 aa40.45■■■■■ 4.07
NXPH3-201ENST00000328741 BICRAQ9NZM4 1560 aa40.35■■■■■ 4.05
NXPH3-201ENST00000328741 TOP2AP11388 1531 aaKnown RBP40.27■■■■■ 4.04
NXPH3-201ENST00000328741 EIF4G1Q04637 1599 aaKnown RBP40.21■■■■■ 4.03
NXPH3-201ENST00000328741 PCGF6Q9BYE7 350 aa40.16■■■■■ 4.02
NXPH3-201ENST00000328741 PABPN1Q86U42 306 aaKnown RBP eCLIP40.14■■■■■ 4.02
NXPH3-201ENST00000328741 SMARCA2P51531 1590 aa40.03■■■■■ 4
NXPH3-201ENST00000328741 CCDC88BA6NC98 1476 aa40■■■■□ 3.99
NXPH3-201ENST00000328741 HRCP23327 699 aa39.98■■■■□ 3.99
NXPH3-201ENST00000328741 FAM9AQ8IZU1 332 aaPredicted RBP39.96■■■■□ 3.99
NXPH3-201ENST00000328741 PEG3Q9GZU2 1588 aa39.81■■■■□ 3.96
NXPH3-201ENST00000328741 ABCC8Q09428 1581 aa39.69■■■■□ 3.94
NXPH3-201ENST00000328741 TRIM26Q12899 539 aaPredicted RBP39.62■■■■□ 3.93
NXPH3-201ENST00000328741 EHMT2Q96KQ7 1210 aa39.52■■■■□ 3.92
NXPH3-201ENST00000328741 ATAD2BQ9ULI0 1458 aa39.5■■■■□ 3.91
NXPH3-201ENST00000328741 BAZ1BQ9UIG0 1483 aaKnown RBP39.34■■■■□ 3.89
NXPH3-201ENST00000328741 SOGA1O94964 1423 aa39.16■■■■□ 3.86
NXPH3-201ENST00000328741 WRNQ14191 1432 aaPredicted RBP eCLIP39.11■■■■□ 3.85
NXPH3-201ENST00000328741 PPARGC1BQ86YN6 1023 aaKnown RBP39.05■■■■□ 3.84
NXPH3-201ENST00000328741 EEA1Q15075 1411 aa39.02■■■■□ 3.84
NXPH3-201ENST00000328741 RUSC2Q8N2Y8 1516 aa39.01■■■■□ 3.84
NXPH3-201ENST00000328741 SYNJ1O43426 1573 aa39■■■■□ 3.83
NXPH3-201ENST00000328741 HMGXB3Q12766 1538 aa38.88■■■■□ 3.81
NXPH3-201ENST00000328741 CSRNP3Q8WYN3 585 aa38.88■■■■□ 3.81
NXPH3-201ENST00000328741 NCAPD3P42695 1498 aa38.86■■■■□ 3.81
NXPH3-201ENST00000328741 TNIKQ9UKE5 1360 aa38.78■■■■□ 3.8
NXPH3-201ENST00000328741 CEP162Q5TB80 1403 aa38.77■■■■□ 3.8
NXPH3-201ENST00000328741 GOLGA3Q08378 1498 aa38.67■■■■□ 3.78
NXPH3-201ENST00000328741 ZEB1P37275 1124 aaPredicted RBP38.64■■■■□ 3.78
NXPH3-201ENST00000328741 TOP2BQ02880 1626 aa38.62■■■■□ 3.77
NXPH3-201ENST00000328741 KIF21BO75037 1637 aa38.57■■■■□ 3.77
NXPH3-201ENST00000328741 UBTFP17480 764 aaKnown RBP38.57■■■■□ 3.76
NXPH3-201ENST00000328741 BIVM-ERCC5R4GMW8 1640 aa38.55■■■■□ 3.76
NXPH3-201ENST00000328741 CEP164Q9UPV0 1460 aa38.53■■■■□ 3.76
NXPH3-201ENST00000328741 CFTRP13569 1480 aa38.39■■■■□ 3.74
NXPH3-201ENST00000328741 CUX1P39880 1505 aa38.31■■■■□ 3.72
NXPH3-201ENST00000328741 RAPGEF2Q9Y4G8 1499 aa38.28■■■■□ 3.72
NXPH3-201ENST00000328741 PRDM2Q13029 1718 aa38.26■■■■□ 3.72
NXPH3-201ENST00000328741 CLIP1P30622 1438 aa38.15■■■■□ 3.7
NXPH3-201ENST00000328741 CC2D2AQ9P2K1 1620 aa38.15■■■■□ 3.7
NXPH3-201ENST00000328741 TTBK1Q5TCY1 1321 aaPredicted RBP38.13■■■■□ 3.69
NXPH3-201ENST00000328741 PRXQ9BXM0 1461 aa38.05■■■■□ 3.68
NXPH3-201ENST00000328741 ERICH3Q5RHP9 1530 aa38.04■■■■□ 3.68
NXPH3-201ENST00000328741 CADPSQ9ULU8 1353 aa38■■■■□ 3.67
NXPH3-201ENST00000328741 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38■■■■□ 3.67
NXPH3-201ENST00000328741 VPS8Q8N3P4 1428 aa37.97■■■■□ 3.67
NXPH3-201ENST00000328741 KIF27Q86VH2 1401 aa37.95■■■■□ 3.67
NXPH3-201ENST00000328741 CCER1Q8TC90 406 aaPredicted RBP37.92■■■■□ 3.66
NXPH3-201ENST00000328741 RANGAP1P46060 587 aaPredicted RBP37.79■■■■□ 3.64
NXPH3-201ENST00000328741 FGD5Q6ZNL6 1462 aa37.67■■■■□ 3.62
NXPH3-201ENST00000328741 CUX2O14529 1486 aa37.67■■■■□ 3.62
NXPH3-201ENST00000328741 ARAP1Q96P48 1450 aa37.66■■■■□ 3.62
NXPH3-201ENST00000328741 FANCD2Q9BXW9 1451 aa37.64■■■■□ 3.62
NXPH3-201ENST00000328741 APLP2Q06481 763 aa37.61■■■■□ 3.61
NXPH3-201ENST00000328741 IGF1RP08069 1367 aa37.57■■■■□ 3.6
NXPH3-201ENST00000328741 NESP48681 1621 aa37.49■■■■□ 3.59
NXPH3-201ENST00000328741 DNMBPQ6XZF7 1577 aa37.47■■■■□ 3.59
NXPH3-201ENST00000328741 ARHGAP35Q9NRY4 1499 aa37.43■■■■□ 3.58
NXPH3-201ENST00000328741 CARMIL1Q5VZK9 1371 aa37.38■■■■□ 3.57
NXPH3-201ENST00000328741 TOPBP1Q92547 1522 aa37.38■■■■□ 3.57
NXPH3-201ENST00000328741 HNRNPUL2Q1KMD3 747 aaKnown RBP37.36■■■■□ 3.57
NXPH3-201ENST00000328741 LAMC3Q9Y6N6 1575 aa37.32■■■■□ 3.57
NXPH3-201ENST00000328741 POLA1P09884 1462 aaPredicted RBP37.31■■■■□ 3.56
NXPH3-201ENST00000328741 RAD54L2Q9Y4B4 1467 aa37.29■■■■□ 3.56
NXPH3-201ENST00000328741 ABCA10Q8WWZ4 1543 aa37.28■■■■□ 3.56
NXPH3-201ENST00000328741 KANK4Q5T7N3 995 aaPredicted RBP37.25■■■■□ 3.55
NXPH3-201ENST00000328741 URB2Q14146 1524 aaKnown RBP37.16■■■■□ 3.54
NXPH3-201ENST00000328741 DNAJC5BQ9UF47 199 aa37.11■■■■□ 3.53
NXPH3-201ENST00000328741 WDR97A6NE52 1622 aa37.1■■■■□ 3.53
NXPH3-201ENST00000328741 CUL7Q14999 1698 aa37.06■■■■□ 3.52
NXPH3-201ENST00000328741 RRBP1Q9P2E9 1410 aaKnown RBP37.03■■■■□ 3.52
NXPH3-201ENST00000328741 PDS5BQ9NTI5 1447 aa36.99■■■■□ 3.51
NXPH3-201ENST00000328741 KIF21AQ7Z4S6 1674 aa36.98■■■■□ 3.51
NXPH3-201ENST00000328741 TIAM1Q13009 1591 aa36.97■■■■□ 3.51
NXPH3-201ENST00000328741 MAP3K1Q13233 1512 aa36.96■■■■□ 3.51
NXPH3-201ENST00000328741 DIEXFQ68CQ4 756 aaKnown RBP36.96■■■■□ 3.51
NXPH3-201ENST00000328741 CTTNBP2Q8WZ74 1663 aa36.92■■■■□ 3.5
NXPH3-201ENST00000328741 ABCA5Q8WWZ7 1642 aa36.92■■■■□ 3.5
NXPH3-201ENST00000328741 FHAD1B1AJZ9 1412 aa36.86■■■■□ 3.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms