Protein–RNA interactions for Protein: Q86U42

PABPN1, Polyadenylate-binding protein 2, humanhuman

Known RBP eCLIP

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1Q86U42 TXNRD2-215ENST00000494454 2004 ntTSL 1 (best)26.98■■□□□ 1.917e-7■■■■□ 25.6
PABPN1Q86U42 TRMT2A-213ENST00000480339 762 ntTSL 226.49■■□□□ 1.837e-7■■■■□ 25.6
PABPN1Q86U42 LIG1-206ENST00000594067 2697 ntTSL 225.5■■□□□ 1.672e-6■■■■□ 25.6
PABPN1Q86U42 OTUB1-201ENST00000301453 2493 ntTSL 225.19■■□□□ 1.628e-7■■■■□ 25.6
PABPN1Q86U42 DENND4B-208ENST00000480340 2530 ntTSL 225.12■■□□□ 1.617e-7■■■■□ 25.6
PABPN1Q86U42 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.517e-7■■■■□ 25.6
PABPN1Q86U42 CLSTN3-206ENST00000535668 566 ntTSL 323.67■■□□□ 1.387e-7■■■■□ 25.6
PABPN1Q86U42 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC23.45■■□□□ 1.342e-6■■■■□ 25.6
PABPN1Q86U42 PDXDC2P-NPIPB14P-204ENST00000530079 2764 ntTSL 523.43■■□□□ 1.347e-7■■■■□ 25.6
PABPN1Q86U42 TXNRD2-216ENST00000495655 2700 ntTSL 223.28■■□□□ 1.327e-7■■■■□ 25.6
PABPN1Q86U42 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.22e-6■■■■□ 25.6
PABPN1Q86U42 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.17e-7■■■■□ 25.6
PABPN1Q86U42 INTS1-205ENST00000483196 386 ntTSL 521.78■■□□□ 1.087e-7■■■■□ 25.6
PABPN1Q86U42 RANGAP1-201ENST00000356244 3060 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.943e-6■■■■□ 25.6
PABPN1Q86U42 RANGAP1-202ENST00000405486 3469 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.883e-6■■■■□ 25.6
PABPN1Q86U42 ORM2-201ENST00000431067 760 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.857e-7■■■■□ 25.6
PABPN1Q86U42 LIG1-201ENST00000263274 3384 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.762e-6■■■■□ 25.6
PABPN1Q86U42 STAT2-203ENST00000555488 536 ntTSL 319.06■□□□□ 0.647e-7■■■■□ 25.6
PABPN1Q86U42 CES2-202ENST00000417689 3868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.647e-7■■■■□ 25.6
PABPN1Q86U42 LIG1-221ENST00000613670 3949 ntTSL 1 (best) BASIC18.48■□□□□ 0.552e-6■■■■□ 25.6
PABPN1Q86U42 CLSTN3-201ENST00000266546 4185 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.537e-7■■■■□ 25.6
PABPN1Q86U42 LIG1-207ENST00000594759 4102 ntTSL 1 (best)18.04■□□□□ 0.482e-6■■■■□ 25.6
PABPN1Q86U42 CTSA-208ENST00000485627 695 ntTSL 317.86■□□□□ 0.457e-7■■■■□ 25.6
PABPN1Q86U42 CES2-201ENST00000317091 3927 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.437e-7■■■■□ 25.6
PABPN1Q86U42 CLSTN3-207ENST00000537408 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.417e-7■■■■□ 25.6
PABPN1Q86U42 RANGAP1-207ENST00000455915 4222 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.353e-6■■■■□ 25.6
PABPN1Q86U42 PDXDC2P-NPIPB14P-205ENST00000531894 4184 ntTSL 1 (best) BASIC17.13■□□□□ 0.337e-7■■■■□ 25.6
PABPN1Q86U42 LPIN3-204ENST00000496565 568 ntTSL 316.49■□□□□ 0.237e-7■■■■□ 25.6
PABPN1Q86U42 TUBB1-201ENST00000217133 3496 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.097e-7■■■■□ 25.6
PABPN1Q86U42 LIG1-220ENST00000601091 3957 ntTSL 515.37■□□□□ 0.052e-6■■■■□ 25.6
PABPN1Q86U42 STAT2-209ENST00000557199 662 ntTSL 413.51□□□□□ -0.257e-7■■■■□ 25.6
PABPN1Q86U42 NPIPB14P-203ENST00000532298 987 ntBASIC12.82□□□□□ -0.367e-7■■■■□ 25.6
PABPN1Q86U42 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.337e-7■■■■□ 25.6
PABPN1Q86U42 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.677e-7■■■■□ 25.6
PABPN1Q86U42 GET4-207ENST00000483469 370 ntTSL 236.79■■■■□ 3.483e-7■■■■□ 25.6
PABPN1Q86U42 SPG7-211ENST00000565370 686 ntTSL 324.58■■□□□ 1.533e-9■■■■□ 25.6
PABPN1Q86U42 DDX41-204ENST00000504807 794 ntTSL 228.28■■■□□ 2.124e-7■■■■□ 25.5
PABPN1Q86U42 VARS2-205ENST00000469358 3429 ntTSL 518.43■□□□□ 0.542e-7■■■■□ 25.5
PABPN1Q86U42 VPS16-201ENST00000380443 1825 ntTSL 1 (best)39.84■■■■□ 3.976e-7■■■■□ 25.5
PABPN1Q86U42 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC25.28■■□□□ 1.646e-7■■■■□ 25.5
PABPN1Q86U42 VPS16-202ENST00000380445 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.96e-7■■■■□ 25.5
PABPN1Q86U42 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC48.56■■■■■ 5.361e-12■■■■□ 25.5
PABPN1Q86U42 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC47.39■■■■■ 5.181e-12■■■■□ 25.5
PABPN1Q86U42 MAMDC4-203ENST00000479475 2603 ntTSL 1 (best)30.85■■■□□ 2.538e-7■■■■□ 25.4
PABPN1Q86U42 MIR939-201ENST00000401314 82 ntBASIC45.35■■■■■ 4.852e-8■■■■□ 25.4
PABPN1Q86U42 WDR13-210ENST00000492873 470 ntTSL 227.55■■■□□ 28e-7■■■■□ 25.4
PABPN1Q86U42 FANCA-211ENST00000563510 633 ntTSL 522.67■■□□□ 1.227e-8■■■■□ 25.4
PABPN1Q86U42 NCAPH2-208ENST00000522048 1069 ntTSL 235.79■■■■□ 3.322e-6■■■■□ 25.3
PABPN1Q86U42 NCAPH2-207ENST00000520297 539 ntTSL 534.62■■■■□ 3.132e-6■■■■□ 25.3
PABPN1Q86U42 SRRT-203ENST00000445337 446 ntTSL 311.62□□□□□ -0.552e-7■■■■□ 25.3
PABPN1Q86U42 TCF25-210ENST00000563484 468 ntTSL 224.09■■□□□ 1.452e-8■■■■□ 25.2
PABPN1Q86U42 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC28.68■■■□□ 2.182e-8■■■■□ 25.2
PABPN1Q86U42 CHRD-208ENST00000460627 4719 ntTSL 227.08■■□□□ 1.932e-8■■■■□ 25.2
PABPN1Q86U42 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.562e-8■■■■□ 25.2
PABPN1Q86U42 CHRD-212ENST00000470150 4234 ntTSL 223.96■■□□□ 1.432e-8■■■■□ 25.2
PABPN1Q86U42 CHRD-204ENST00000420973 3492 ntTSL 1 (best)23.54■■□□□ 1.362e-8■■■■□ 25.2
PABPN1Q86U42 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.332e-8■■■■□ 25.2
PABPN1Q86U42 CHRD-205ENST00000448472 3547 ntTSL 1 (best)23.34■■□□□ 1.332e-8■■■■□ 25.2
PABPN1Q86U42 COL7A1-210ENST00000487017 5807 ntTSL 523.08■■□□□ 1.298e-7■■■■□ 25.2
PABPN1Q86U42 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.448e-7■■■■□ 25.2
PABPN1Q86U42 VARS2-209ENST00000477288 6054 ntTSL 226.14■■□□□ 1.772e-7■■■■□ 25.2
PABPN1Q86U42 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.522e-7■■■■□ 25.2
PABPN1Q86U42 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC23.88■■□□□ 1.412e-7■■■■□ 25.2
PABPN1Q86U42 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC23.22■■□□□ 1.312e-7■■■■□ 25.2
PABPN1Q86U42 VARS2-213ENST00000625423 3362 ntTSL 2 BASIC17.7■□□□□ 0.422e-7■■■■□ 25.2
PABPN1Q86U42 FTCD-212ENST00000498355 1936 ntTSL 247.07■■■■■ 5.122e-9■■■■□ 25.1
PABPN1Q86U42 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC45.34■■■■■ 4.852e-9■■■■□ 25.1
PABPN1Q86U42 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC43.97■■■■■ 4.632e-9■■■■□ 25.1
PABPN1Q86U42 TCIRG1-210ENST00000530063 220 ntTSL 1 (best)7.3□□□□□ -1.245e-9■■■■□ 25.1
PABPN1Q86U42 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC55.89■■■■■ 6.548e-9■■■■□ 25.1
PABPN1Q86U42 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC50.8■■■■■ 5.723e-9■■■■□ 25
PABPN1Q86U42 LIME1-204ENST00000476183 809 ntAPPRIS ALT2 TSL 542.69■■■■■ 4.423e-9■■■■□ 25
PABPN1Q86U42 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC41.73■■■■■ 4.271e-6■■■■□ 25
PABPN1Q86U42 AL121845.3-202ENST00000632538 872 ntAPPRIS P1 TSL 340.05■■■■■ 43e-9■■■■□ 25
PABPN1Q86U42 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC38.91■■■■□ 3.822e-7■■■■□ 25
PABPN1Q86U42 TSTA3-214ENST00000531473 2220 ntTSL 1 (best)35.33■■■■□ 3.252e-7■■■■□ 25
PABPN1Q86U42 NEURL4-208ENST00000572680 819 ntTSL 230.05■■■□□ 2.41e-6■■■■□ 25
PABPN1Q86U42 TSTA3-208ENST00000528920 964 ntTSL 528.93■■■□□ 2.222e-7■■■■□ 25
PABPN1Q86U42 TSTA3-210ENST00000529064 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.322e-7■■■■□ 25
PABPN1Q86U42 WWP2-201ENST00000356003 4227 ntTSL 2 BASIC18.89■□□□□ 0.611e-6■■■■□ 25
PABPN1Q86U42 WWP2-202ENST00000359154 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.571e-6■■■■□ 25
PABPN1Q86U42 WWP2-213ENST00000568684 3672 ntTSL 2 BASIC16.56■□□□□ 0.241e-6■■■■□ 25
PABPN1Q86U42 JMJD8-214ENST00000569441 1428 ntTSL 559.18■■■■■ 7.062e-6■■■■□ 24.9
PABPN1Q86U42 JMJD8-208ENST00000566199 719 ntTSL 352.96■■■■■ 6.072e-6■■■■□ 24.9
PABPN1Q86U42 JMJD8-212ENST00000568689 1998 ntTSL 352.25■■■■■ 5.962e-6■■■■□ 24.9
PABPN1Q86U42 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC49.59■■■■■ 5.532e-6■■■■□ 24.9
PABPN1Q86U42 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC48.79■■■■■ 5.42e-6■■■■□ 24.9
PABPN1Q86U42 JMJD8-213ENST00000569396 729 ntTSL 547.26■■■■■ 5.162e-6■■■■□ 24.9
PABPN1Q86U42 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC45.8■■■■■ 4.922e-6■■■■□ 24.9
PABPN1Q86U42 JMJD8-209ENST00000567120 2205 ntTSL 1 (best)45.4■■■■■ 4.862e-6■■■■□ 24.9
PABPN1Q86U42 JMJD8-210ENST00000567901 785 ntTSL 344.84■■■■■ 4.772e-6■■■■□ 24.9
PABPN1Q86U42 JMJD8-204ENST00000563088 1067 ntTSL 338.29■■■■□ 3.722e-6■■■■□ 24.9
PABPN1Q86U42 JMJD8-207ENST00000565302 1975 ntTSL 337.55■■■■□ 3.62e-6■■■■□ 24.9
PABPN1Q86U42 STAT6-209ENST00000553533 868 ntTSL 327.95■■■□□ 2.062e-6■■■■□ 24.9
PABPN1Q86U42 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC27.57■■■□□ 22e-6■■■■□ 24.9
PABPN1Q86U42 STAT6-217ENST00000555375 623 ntTSL 326.84■■□□□ 1.892e-6■■■■□ 24.9
PABPN1Q86U42 IL17RC-210ENST00000438091 1208 ntTSL 540.76■■■■■ 4.125e-7■■■■□ 24.9
PABPN1Q86U42 IL17RC-209ENST00000436503 1445 ntTSL 1 (best)38.65■■■■□ 3.785e-7■■■■□ 24.9
PABPN1Q86U42 IL17RC-216ENST00000461995 862 ntTSL 338.36■■■■□ 3.735e-7■■■■□ 24.9
PABPN1Q86U42 IL17RC-213ENST00000451231 2163 ntTSL 237.12■■■■□ 3.535e-7■■■■□ 24.9
Retrieved 100 of 8,254 protein–RNA pairs in 335.7 ms