RNA–Protein interactions for RNA: ENST00000480339.1

TRMT2A-213, Transcript of tRNA methyltransferase 2 homolog A, humanhuman

TSL 2

Gene TRMT2A, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT2A-213ENST00000480339 NISCHQ9Y2I1 1504 aa31.03■■■□□ 2.56
TRMT2A-213ENST00000480339 ABCC9O60706 1549 aa28.4■■■□□ 2.14
TRMT2A-213ENST00000480339 CCDC180Q9P1Z9 1646 aa27.85■■■□□ 2.05
TRMT2A-213ENST00000480339 DNAJC5BQ9UF47 199 aa27.13■■□□□ 1.93
TRMT2A-213ENST00000480339 RB1CC1Q8TDY2 1594 aa26.75■■□□□ 1.87
TRMT2A-213ENST00000480339 NACADO15069 1562 aa26.5■■□□□ 1.83
TRMT2A-213ENST00000480339 PABPN1Q86U42 306 aaKnown RBP eCLIP26.49■■□□□ 1.837e-7■■■■□ 25.6
TRMT2A-213ENST00000480339 DCAF8L2P0C7V8 631 aa26.48■■□□□ 1.83
TRMT2A-213ENST00000480339 UNC13AQ9UPW8 1703 aa26.11■■□□□ 1.77
TRMT2A-213ENST00000480339 BICRAQ9NZM4 1560 aa26.07■■□□□ 1.76
TRMT2A-213ENST00000480339 MYO15BQ96JP2 1530 aa26.01■■□□□ 1.75
TRMT2A-213ENST00000480339 ZCCHC6Q5VYS8 1495 aaKnown RBP25.61■■□□□ 1.69
TRMT2A-213ENST00000480339 CECR2Q9BXF3 1484 aa25.6■■□□□ 1.69
TRMT2A-213ENST00000480339 CC2D2AQ9P2K1 1620 aa25.57■■□□□ 1.68
TRMT2A-213ENST00000480339 SHROOM4Q9ULL8 1493 aa25.56■■□□□ 1.68
TRMT2A-213ENST00000480339 DCAF1Q9Y4B6 1507 aa25.55■■□□□ 1.68
TRMT2A-213ENST00000480339 SCRIBQ14160 1630 aa25.45■■□□□ 1.67
TRMT2A-213ENST00000480339 EIF4G1Q04637 1599 aaKnown RBP25.43■■□□□ 1.66
TRMT2A-213ENST00000480339 DNAJC5Q9H3Z4 198 aa25.1■■□□□ 1.61
TRMT2A-213ENST00000480339 NCAPD3P42695 1498 aa24.56■■□□□ 1.52
TRMT2A-213ENST00000480339 CUX2O14529 1486 aa24.55■■□□□ 1.52
TRMT2A-213ENST00000480339 ERCC6Q03468 1493 aa24.48■■□□□ 1.51
TRMT2A-213ENST00000480339 ATAD2BQ9ULI0 1458 aa24.43■■□□□ 1.5
TRMT2A-213ENST00000480339 NESP48681 1621 aa24.31■■□□□ 1.48
TRMT2A-213ENST00000480339 SMARCA2P51531 1590 aa24.25■■□□□ 1.47
TRMT2A-213ENST00000480339 HMGXB3Q12766 1538 aa24.23■■□□□ 1.47
TRMT2A-213ENST00000480339 SMARCA4P51532 1647 aa24.23■■□□□ 1.47
TRMT2A-213ENST00000480339 BAZ1BQ9UIG0 1483 aaKnown RBP24.12■■□□□ 1.45
TRMT2A-213ENST00000480339 BAZ1AQ9NRL2 1556 aaPredicted RBP24.05■■□□□ 1.44
TRMT2A-213ENST00000480339 THOC2Q8NI27 1593 aaKnown RBP24.03■■□□□ 1.44
TRMT2A-213ENST00000480339 PEG3Q9GZU2 1588 aa23.99■■□□□ 1.43
TRMT2A-213ENST00000480339 LAMC3Q9Y6N6 1575 aa23.95■■□□□ 1.43
TRMT2A-213ENST00000480339 MROH2BQ7Z745 1585 aa23.94■■□□□ 1.42
TRMT2A-213ENST00000480339 PDS5BQ9NTI5 1447 aa23.9■■□□□ 1.42
TRMT2A-213ENST00000480339 KIF21AQ7Z4S6 1674 aa23.85■■□□□ 1.41
TRMT2A-213ENST00000480339 TRIM41Q8WV44 630 aa23.84■■□□□ 1.41
TRMT2A-213ENST00000480339 CADPSQ9ULU8 1353 aa23.8■■□□□ 1.4
TRMT2A-213ENST00000480339 MRC2Q9UBG0 1479 aa23.7■■□□□ 1.38
TRMT2A-213ENST00000480339 WDR62O43379 1518 aa23.64■■□□□ 1.37
TRMT2A-213ENST00000480339 WIZO95785 1651 aa23.58■■□□□ 1.37
TRMT2A-213ENST00000480339 CEP164Q9UPV0 1460 aa23.51■■□□□ 1.35
TRMT2A-213ENST00000480339 FANCD2Q9BXW9 1451 aa23.49■■□□□ 1.35
TRMT2A-213ENST00000480339 OSCARQ8IYS5 282 aa23.48■■□□□ 1.35
TRMT2A-213ENST00000480339 CFTRP13569 1480 aa23.43■■□□□ 1.34
TRMT2A-213ENST00000480339 URB2Q14146 1524 aaKnown RBP23.34■■□□□ 1.33
TRMT2A-213ENST00000480339 RSF1Q96T23 1441 aaPredicted RBP23.33■■□□□ 1.33
TRMT2A-213ENST00000480339 TOP2AP11388 1531 aaKnown RBP23.23■■□□□ 1.31
TRMT2A-213ENST00000480339 ZNF608Q9ULD9 1512 aaPredicted RBP23.14■■□□□ 1.3
TRMT2A-213ENST00000480339 RIMBP3CA6NJZ7 1639 aa23.11■■□□□ 1.29
TRMT2A-213ENST00000480339 RIMBP3BA6NNM3 1639 aa23.11■■□□□ 1.29
TRMT2A-213ENST00000480339 RIMBP3Q9UFD9 1639 aa23.11■■□□□ 1.29
TRMT2A-213ENST00000480339 IFT140Q96RY7 1462 aa23.08■■□□□ 1.29
TRMT2A-213ENST00000480339 CCDC88BA6NC98 1476 aa23.06■■□□□ 1.28
TRMT2A-213ENST00000480339 ARHGEF11O15085 1522 aa23.02■■□□□ 1.28
TRMT2A-213ENST00000480339 TOPBP1Q92547 1522 aa23.01■■□□□ 1.27
TRMT2A-213ENST00000480339 CYB5RLQ6IPT4 315 aa22.99■■□□□ 1.27
TRMT2A-213ENST00000480339 PRDM2Q13029 1718 aa22.95■■□□□ 1.26
TRMT2A-213ENST00000480339 AQRO60306 1485 aaKnown RBP eCLIP22.92■■□□□ 1.26
TRMT2A-213ENST00000480339 ABCC8Q09428 1581 aa22.89■■□□□ 1.25
TRMT2A-213ENST00000480339 EIF4G3O43432 1585 aaKnown RBP22.88■■□□□ 1.25
TRMT2A-213ENST00000480339 FBLN2P98095 1184 aa22.84■■□□□ 1.25
TRMT2A-213ENST00000480339 DNMBPQ6XZF7 1577 aa22.84■■□□□ 1.25
TRMT2A-213ENST00000480339 TRHP20396 242 aaPredicted RBP22.82■■□□□ 1.24
TRMT2A-213ENST00000480339 TARBP1Q13395 1621 aaKnown RBP22.8■■□□□ 1.24
TRMT2A-213ENST00000480339 ARAP1Q96P48 1450 aa22.79■■□□□ 1.24
TRMT2A-213ENST00000480339 POLA1P09884 1462 aaPredicted RBP22.75■■□□□ 1.23
TRMT2A-213ENST00000480339 CHD1O14646 1710 aa22.75■■□□□ 1.23
TRMT2A-213ENST00000480339 RAD54L2Q9Y4B4 1467 aa22.74■■□□□ 1.23
TRMT2A-213ENST00000480339 TDRD9Q8NDG6 1382 aaKnown RBP22.73■■□□□ 1.23
TRMT2A-213ENST00000480339 SOGA1O94964 1423 aa22.68■■□□□ 1.22
TRMT2A-213ENST00000480339 SNAPC4Q5SXM2 1469 aa22.6■■□□□ 1.21
TRMT2A-213ENST00000480339 CHMP7Q8WUX9 453 aaPredicted RBP22.59■■□□□ 1.21
TRMT2A-213ENST00000480339 FGD5Q6ZNL6 1462 aa22.56■■□□□ 1.2
TRMT2A-213ENST00000480339 CLASP1Q7Z460 1538 aa22.55■■□□□ 1.2
TRMT2A-213ENST00000480339 CUX1P39880 1505 aa22.49■■□□□ 1.19
TRMT2A-213ENST00000480339 GRIN2BQ13224 1484 aa22.47■■□□□ 1.19
TRMT2A-213ENST00000480339 MAGI1Q96QZ7 1491 aaPredicted RBP22.47■■□□□ 1.19
TRMT2A-213ENST00000480339 SYNJ1O43426 1573 aa22.46■■□□□ 1.19
TRMT2A-213ENST00000480339 WDR97A6NE52 1622 aa22.45■■□□□ 1.18
TRMT2A-213ENST00000480339 SYNJ2O15056 1496 aa22.44■■□□□ 1.18
TRMT2A-213ENST00000480339 AEBP2Q6ZN18 517 aaPredicted RBP22.39■■□□□ 1.17
TRMT2A-213ENST00000480339 GAPVD1Q14C86 1478 aa22.37■■□□□ 1.17
TRMT2A-213ENST00000480339 ABCA10Q8WWZ4 1543 aa22.26■■□□□ 1.15
TRMT2A-213ENST00000480339 PBRM1Q86U86 1689 aa22.25■■□□□ 1.15
TRMT2A-213ENST00000480339 ERCC6L2Q5T890 1561 aa22.25■■□□□ 1.15
TRMT2A-213ENST00000480339 ABCA5Q8WWZ7 1642 aa22.22■■□□□ 1.15
TRMT2A-213ENST00000480339 GRIN2AQ12879 1464 aa22.18■■□□□ 1.14
TRMT2A-213ENST00000480339 NUP160Q12769 1436 aa22.14■■□□□ 1.14
TRMT2A-213ENST00000480339 WRNQ14191 1432 aaPredicted RBP eCLIP22.12■■□□□ 1.13
TRMT2A-213ENST00000480339 CEP170Q5SW79 1584 aa22.12■■□□□ 1.13
TRMT2A-213ENST00000480339 SUPT5HO00267 1087 aaKnown RBP22.09■■□□□ 1.13
TRMT2A-213ENST00000480339 ADAMTS12P58397 1594 aa22.08■■□□□ 1.12
TRMT2A-213ENST00000480339 FHAD1B1AJZ9 1412 aa22.06■■□□□ 1.12
TRMT2A-213ENST00000480339 SHROOM2Q13796 1616 aa22.02■■□□□ 1.11
TRMT2A-213ENST00000480339 JPH4Q96JJ6 628 aa22■■□□□ 1.11
TRMT2A-213ENST00000480339 PRG4Q92954 1404 aaPredicted RBP21.98■■□□□ 1.11
TRMT2A-213ENST00000480339 TOP2BQ02880 1626 aa21.97■■□□□ 1.11
TRMT2A-213ENST00000480339 ERICH3Q5RHP9 1530 aa21.94■■□□□ 1.1
TRMT2A-213ENST00000480339 BIVM-ERCC5R4GMW8 1640 aa21.94■■□□□ 1.1
TRMT2A-213ENST00000480339 FAM69CQ0P6D2 419 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms