RNA–Protein interactions for RNA: ENST00000563510.5

FANCA-211, Transcript of FA complementation group A, humanhuman

TSL 5

Gene FANCA, Length 633 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-211ENST00000563510 NISCHQ9Y2I1 1504 aa27.11■■□□□ 1.93
FANCA-211ENST00000563510 CHIC1Q5VXU3 224 aa26.61■■□□□ 1.85
FANCA-211ENST00000563510 AEBP2Q6ZN18 517 aaPredicted RBP26.53■■□□□ 1.84
FANCA-211ENST00000563510 CCDC180Q9P1Z9 1646 aa24.57■■□□□ 1.52
FANCA-211ENST00000563510 ABCC9O60706 1549 aa24.5■■□□□ 1.51
FANCA-211ENST00000563510 PHF23Q9BUL5 403 aaPredicted RBP23.51■■□□□ 1.35
FANCA-211ENST00000563510 RB1CC1Q8TDY2 1594 aa23.38■■□□□ 1.33
FANCA-211ENST00000563510 NACADO15069 1562 aa23.17■■□□□ 1.3
FANCA-211ENST00000563510 DNAJC5BQ9UF47 199 aa22.97■■□□□ 1.27
FANCA-211ENST00000563510 UNC13AQ9UPW8 1703 aa22.94■■□□□ 1.26
FANCA-211ENST00000563510 MYO15BQ96JP2 1530 aa22.81■■□□□ 1.24
FANCA-211ENST00000563510 DCAF8L2P0C7V8 631 aa22.78■■□□□ 1.24
FANCA-211ENST00000563510 PABPN1Q86U42 306 aaKnown RBP eCLIP22.67■■□□□ 1.227e-8■■■■□ 25.4
FANCA-211ENST00000563510 BICRAQ9NZM4 1560 aa22.64■■□□□ 1.22
FANCA-211ENST00000563510 ZCCHC6Q5VYS8 1495 aaKnown RBP22.46■■□□□ 1.19
FANCA-211ENST00000563510 DCAF1Q9Y4B6 1507 aa22.45■■□□□ 1.18
FANCA-211ENST00000563510 SHROOM4Q9ULL8 1493 aa22.43■■□□□ 1.18
FANCA-211ENST00000563510 SENP3Q9H4L4 574 aaPredicted RBP22.35■■□□□ 1.17
FANCA-211ENST00000563510 SCRIBQ14160 1630 aa22.25■■□□□ 1.15
FANCA-211ENST00000563510 CC2D2AQ9P2K1 1620 aa22.2■■□□□ 1.15
FANCA-211ENST00000563510 EIF4G1Q04637 1599 aaKnown RBP22.12■■□□□ 1.13
FANCA-211ENST00000563510 CECR2Q9BXF3 1484 aa22.1■■□□□ 1.13
FANCA-211ENST00000563510 PLPPR3Q6T4P5 718 aa21.93■■□□□ 1.1
FANCA-211ENST00000563510 NCAPD3P42695 1498 aa21.31■■□□□ 1
FANCA-211ENST00000563510 DNAJC5Q9H3Z4 198 aa21.29■■□□□ 1
FANCA-211ENST00000563510 CUX2O14529 1486 aa21.27■■□□□ 1
FANCA-211ENST00000563510 SMARCA4P51532 1647 aa21.25■□□□□ 0.99
FANCA-211ENST00000563510 SMARCA2P51531 1590 aa21.24■□□□□ 0.99
FANCA-211ENST00000563510 HMGXB3Q12766 1538 aa21.24■□□□□ 0.99
FANCA-211ENST00000563510 ERCC6Q03468 1493 aa21.21■□□□□ 0.99
FANCA-211ENST00000563510 ATAD2BQ9ULI0 1458 aa21.21■□□□□ 0.99
FANCA-211ENST00000563510 BAZ1AQ9NRL2 1556 aaPredicted RBP21.11■□□□□ 0.97
FANCA-211ENST00000563510 BAZ1BQ9UIG0 1483 aaKnown RBP21.05■□□□□ 0.96
FANCA-211ENST00000563510 PEG3Q9GZU2 1588 aa21.05■□□□□ 0.96
FANCA-211ENST00000563510 NESP48681 1621 aa20.99■□□□□ 0.95
FANCA-211ENST00000563510 LAMC3Q9Y6N6 1575 aa20.96■□□□□ 0.95
FANCA-211ENST00000563510 THOC2Q8NI27 1593 aaKnown RBP20.93■□□□□ 0.94
FANCA-211ENST00000563510 KIF21AQ7Z4S6 1674 aa20.87■□□□□ 0.93
FANCA-211ENST00000563510 MROH2BQ7Z745 1585 aa20.85■□□□□ 0.93
FANCA-211ENST00000563510 PDS5BQ9NTI5 1447 aa20.76■□□□□ 0.91
FANCA-211ENST00000563510 FOXD1Q16676 465 aa20.68■□□□□ 0.9
FANCA-211ENST00000563510 WIZO95785 1651 aa20.66■□□□□ 0.9
FANCA-211ENST00000563510 CADPSQ9ULU8 1353 aa20.62■□□□□ 0.89
FANCA-211ENST00000563510 MRC2Q9UBG0 1479 aa20.61■□□□□ 0.89
FANCA-211ENST00000563510 WDR62O43379 1518 aa20.59■□□□□ 0.89
FANCA-211ENST00000563510 ADRA2BP18089 450 aa20.58■□□□□ 0.89
FANCA-211ENST00000563510 PPP6R1Q9UPN7 881 aa20.52■□□□□ 0.88
FANCA-211ENST00000563510 CEP164Q9UPV0 1460 aa20.5■□□□□ 0.87
FANCA-211ENST00000563510 FANCD2Q9BXW9 1451 aa20.43■□□□□ 0.86
FANCA-211ENST00000563510 PRDM2Q13029 1718 aa20.42■□□□□ 0.86
FANCA-211ENST00000563510 TOP2AP11388 1531 aaKnown RBP20.4■□□□□ 0.86
FANCA-211ENST00000563510 CFTRP13569 1480 aa20.39■□□□□ 0.85
FANCA-211ENST00000563510 RSF1Q96T23 1441 aaPredicted RBP20.33■□□□□ 0.84
FANCA-211ENST00000563510 TRIM41Q8WV44 630 aa20.27■□□□□ 0.84
FANCA-211ENST00000563510 URB2Q14146 1524 aaKnown RBP20.27■□□□□ 0.83
FANCA-211ENST00000563510 OSCARQ8IYS5 282 aa20.15■□□□□ 0.82
FANCA-211ENST00000563510 IFT140Q96RY7 1462 aa20.09■□□□□ 0.81
FANCA-211ENST00000563510 CCDC88BA6NC98 1476 aa20.08■□□□□ 0.81
FANCA-211ENST00000563510 TOPBP1Q92547 1522 aa20.04■□□□□ 0.8
FANCA-211ENST00000563510 ABCC8Q09428 1581 aa20.04■□□□□ 0.8
FANCA-211ENST00000563510 RIMBP3CA6NJZ7 1639 aa20.03■□□□□ 0.8
FANCA-211ENST00000563510 RIMBP3BA6NNM3 1639 aa20.03■□□□□ 0.8
FANCA-211ENST00000563510 RIMBP3Q9UFD9 1639 aa20.03■□□□□ 0.8
FANCA-211ENST00000563510 EIF4G3O43432 1585 aaKnown RBP20.01■□□□□ 0.79
FANCA-211ENST00000563510 DNMBPQ6XZF7 1577 aa20■□□□□ 0.79
FANCA-211ENST00000563510 ZNF608Q9ULD9 1512 aaPredicted RBP20■□□□□ 0.79
FANCA-211ENST00000563510 CHD1O14646 1710 aa19.93■□□□□ 0.78
FANCA-211ENST00000563510 TARBP1Q13395 1621 aaKnown RBP19.92■□□□□ 0.78
FANCA-211ENST00000563510 ARHGEF11O15085 1522 aa19.92■□□□□ 0.78
FANCA-211ENST00000563510 KCNA4P22459 653 aa19.84■□□□□ 0.77
FANCA-211ENST00000563510 POLA1P09884 1462 aaPredicted RBP19.81■□□□□ 0.76
FANCA-211ENST00000563510 WDR97A6NE52 1622 aa19.8■□□□□ 0.76
FANCA-211ENST00000563510 AQRO60306 1485 aaKnown RBP eCLIP19.79■□□□□ 0.762e-6■■■■■ 28.6
FANCA-211ENST00000563510 SOGA1O94964 1423 aa19.68■□□□□ 0.74
FANCA-211ENST00000563510 ARAP1Q96P48 1450 aa19.68■□□□□ 0.74
FANCA-211ENST00000563510 RAD54L2Q9Y4B4 1467 aa19.68■□□□□ 0.74
FANCA-211ENST00000563510 PIAS4Q8N2W9 510 aaPredicted RBP19.67■□□□□ 0.74
FANCA-211ENST00000563510 FGD5Q6ZNL6 1462 aa19.67■□□□□ 0.74
FANCA-211ENST00000563510 FBLN2P98095 1184 aa19.65■□□□□ 0.74
FANCA-211ENST00000563510 CYB5RLQ6IPT4 315 aa19.65■□□□□ 0.74
FANCA-211ENST00000563510 SNAPC4Q5SXM2 1469 aa19.64■□□□□ 0.73
FANCA-211ENST00000563510 MAGI1Q96QZ7 1491 aaPredicted RBP19.64■□□□□ 0.73
FANCA-211ENST00000563510 SYNJ1O43426 1573 aa19.64■□□□□ 0.73
FANCA-211ENST00000563510 PBRM1Q86U86 1689 aa19.63■□□□□ 0.73
FANCA-211ENST00000563510 CLASP1Q7Z460 1538 aa19.63■□□□□ 0.73
FANCA-211ENST00000563510 CUX1P39880 1505 aa19.62■□□□□ 0.73
FANCA-211ENST00000563510 TDRD9Q8NDG6 1382 aaKnown RBP19.61■□□□□ 0.73
FANCA-211ENST00000563510 GRIN2BQ13224 1484 aa19.58■□□□□ 0.72
FANCA-211ENST00000563510 SYNJ2O15056 1496 aa19.54■□□□□ 0.72
FANCA-211ENST00000563510 TRHP20396 242 aaPredicted RBP19.51■□□□□ 0.71
FANCA-211ENST00000563510 CHMP7Q8WUX9 453 aaPredicted RBP19.51■□□□□ 0.71
FANCA-211ENST00000563510 ABCA5Q8WWZ7 1642 aa19.51■□□□□ 0.71
FANCA-211ENST00000563510 GAPVD1Q14C86 1478 aa19.48■□□□□ 0.71
FANCA-211ENST00000563510 ABCA10Q8WWZ4 1543 aa19.46■□□□□ 0.71
FANCA-211ENST00000563510 PPP4R3CPQ6ZMV5 832 aa19.45■□□□□ 0.7
FANCA-211ENST00000563510 BIVM-ERCC5R4GMW8 1640 aa19.38■□□□□ 0.69
FANCA-211ENST00000563510 EHMT2Q96KQ7 1210 aa19.37■□□□□ 0.69
FANCA-211ENST00000563510 ADAMTS12P58397 1594 aa19.36■□□□□ 0.69
FANCA-211ENST00000563510 GRIN2AQ12879 1464 aa19.34■□□□□ 0.69
FANCA-211ENST00000563510 TOP2BQ02880 1626 aa19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms