RNA–Protein interactions for RNA: ENST00000531894.5

PDXDC2P-NPIPB14P-205, humanhuman

TSL 1 (best) BASIC

Gene PDXDC2P-NPIPB14P, Length 4,184 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC2P-NPIPB14P-205ENST00000531894 NISCHQ9Y2I1 1504 aa22.03■■□□□ 1.12
PDXDC2P-NPIPB14P-205ENST00000531894 SUPT5HO00267 1087 aaKnown RBP20.17■□□□□ 0.82
PDXDC2P-NPIPB14P-205ENST00000531894 SHROOM4Q9ULL8 1493 aa20■□□□□ 0.79
PDXDC2P-NPIPB14P-205ENST00000531894 PCGF6Q9BYE7 350 aa19.85■□□□□ 0.77
PDXDC2P-NPIPB14P-205ENST00000531894 PELP1Q8IZL8 1130 aaKnown RBP19.81■□□□□ 0.76
PDXDC2P-NPIPB14P-205ENST00000531894 DCAF8L2P0C7V8 631 aa19.73■□□□□ 0.75
PDXDC2P-NPIPB14P-205ENST00000531894 PPARGC1BQ86YN6 1023 aaKnown RBP19.66■□□□□ 0.74
PDXDC2P-NPIPB14P-205ENST00000531894 EHMT2Q96KQ7 1210 aa19.51■□□□□ 0.71
PDXDC2P-NPIPB14P-205ENST00000531894 HRCP23327 699 aa19.45■□□□□ 0.7
PDXDC2P-NPIPB14P-205ENST00000531894 MYT1Q01538 1121 aa19.33■□□□□ 0.68
PDXDC2P-NPIPB14P-205ENST00000531894 FAM9AQ8IZU1 332 aaPredicted RBP18.98■□□□□ 0.63
PDXDC2P-NPIPB14P-205ENST00000531894 LOC105371045A0A1W2PR82 267 aa18.95■□□□□ 0.62
PDXDC2P-NPIPB14P-205ENST00000531894 TTBK1Q5TCY1 1321 aaPredicted RBP18.93■□□□□ 0.62
PDXDC2P-NPIPB14P-205ENST00000531894 CHIC1Q5VXU3 224 aa18.78■□□□□ 0.6
PDXDC2P-NPIPB14P-205ENST00000531894 YTHDC1Q96MU7 727 aaKnown RBP18.71■□□□□ 0.59
PDXDC2P-NPIPB14P-205ENST00000531894 CCDC180Q9P1Z9 1646 aa18.7■□□□□ 0.58
PDXDC2P-NPIPB14P-205ENST00000531894 CENPBP07199 599 aaPredicted RBP18.63■□□□□ 0.57
PDXDC2P-NPIPB14P-205ENST00000531894 TRIM26Q12899 539 aaPredicted RBP18.58■□□□□ 0.56
PDXDC2P-NPIPB14P-205ENST00000531894 ZCCHC6Q5VYS8 1495 aaKnown RBP18.55■□□□□ 0.56
PDXDC2P-NPIPB14P-205ENST00000531894 CCER1Q8TC90 406 aaPredicted RBP18.53■□□□□ 0.56
PDXDC2P-NPIPB14P-205ENST00000531894 SCAF1Q9H7N4 1312 aaKnown RBP18.53■□□□□ 0.56
PDXDC2P-NPIPB14P-205ENST00000531894 ZEB1P37275 1124 aaPredicted RBP18.46■□□□□ 0.55
PDXDC2P-NPIPB14P-205ENST00000531894 GTF3C3Q9Y5Q9 886 aa18.4■□□□□ 0.54
PDXDC2P-NPIPB14P-205ENST00000531894 MYO15BQ96JP2 1530 aa18.36■□□□□ 0.53
PDXDC2P-NPIPB14P-205ENST00000531894 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.36■□□□□ 0.53
PDXDC2P-NPIPB14P-205ENST00000531894 TRIM41Q8WV44 630 aa18.28■□□□□ 0.52
PDXDC2P-NPIPB14P-205ENST00000531894 NEUROD1Q13562 356 aa18.2■□□□□ 0.5
PDXDC2P-NPIPB14P-205ENST00000531894 ACIN1Q9UKV3 1341 aaKnown RBP18.16■□□□□ 0.5
PDXDC2P-NPIPB14P-205ENST00000531894 DIEXFQ68CQ4 756 aaKnown RBP18.15■□□□□ 0.5
PDXDC2P-NPIPB14P-205ENST00000531894 ERICH6Q7L0X2 663 aa18.14■□□□□ 0.49
PDXDC2P-NPIPB14P-205ENST00000531894 RANGAP1P46060 587 aaPredicted RBP18.07■□□□□ 0.48
PDXDC2P-NPIPB14P-205ENST00000531894 DCAF1Q9Y4B6 1507 aa17.95■□□□□ 0.46
PDXDC2P-NPIPB14P-205ENST00000531894 BCL11AQ9H165 835 aa17.87■□□□□ 0.45
PDXDC2P-NPIPB14P-205ENST00000531894 ABCC9O60706 1549 aa17.85■□□□□ 0.45
PDXDC2P-NPIPB14P-205ENST00000531894 HNRNPUL2Q1KMD3 747 aaKnown RBP17.83■□□□□ 0.44
PDXDC2P-NPIPB14P-205ENST00000531894 BCANQ96GW7 911 aa17.82■□□□□ 0.44
PDXDC2P-NPIPB14P-205ENST00000531894 UBTFP17480 764 aaKnown RBP17.73■□□□□ 0.43
PDXDC2P-NPIPB14P-205ENST00000531894 SCRIBQ14160 1630 aa17.72■□□□□ 0.43
PDXDC2P-NPIPB14P-205ENST00000531894 APLP2Q06481 763 aa17.67■□□□□ 0.42
PDXDC2P-NPIPB14P-205ENST00000531894 ZNF316A6NFI3 1004 aaPredicted RBP17.56■□□□□ 0.4
PDXDC2P-NPIPB14P-205ENST00000531894 NEFLP07196 543 aa17.55■□□□□ 0.4
PDXDC2P-NPIPB14P-205ENST00000531894 MIER1Q8N108 512 aa17.54■□□□□ 0.4
PDXDC2P-NPIPB14P-205ENST00000531894 ITGAEP38570 1179 aa17.5■□□□□ 0.39
PDXDC2P-NPIPB14P-205ENST00000531894 NACADO15069 1562 aa17.45■□□□□ 0.38
PDXDC2P-NPIPB14P-205ENST00000531894 ANP32EQ9BTT0 268 aa17.43■□□□□ 0.38
PDXDC2P-NPIPB14P-205ENST00000531894 RSF1Q96T23 1441 aaPredicted RBP17.4■□□□□ 0.38
PDXDC2P-NPIPB14P-205ENST00000531894 EIF5BO60841 1220 aaKnown RBP17.33■□□□□ 0.36
PDXDC2P-NPIPB14P-205ENST00000531894 PRKCSHP14314 528 aaPredicted RBP17.31■□□□□ 0.36
PDXDC2P-NPIPB14P-205ENST00000531894 CNGB1Q14028 1251 aaPredicted RBP17.31■□□□□ 0.36
PDXDC2P-NPIPB14P-205ENST00000531894 CSRNP3Q8WYN3 585 aa17.28■□□□□ 0.36
PDXDC2P-NPIPB14P-205ENST00000531894 CECR2Q9BXF3 1484 aa17.27■□□□□ 0.36
PDXDC2P-NPIPB14P-205ENST00000531894 RB1CC1Q8TDY2 1594 aa17.26■□□□□ 0.35
PDXDC2P-NPIPB14P-205ENST00000531894 ATP1B4Q9UN42 357 aaPredicted RBP17.23■□□□□ 0.35
PDXDC2P-NPIPB14P-205ENST00000531894 FKBP8Q14318 412 aa17.23■□□□□ 0.35
PDXDC2P-NPIPB14P-205ENST00000531894 RTL5Q5HYW3 569 aaPredicted RBP17.19■□□□□ 0.34
PDXDC2P-NPIPB14P-205ENST00000531894 MROH2BQ7Z745 1585 aa17.15■□□□□ 0.34
PDXDC2P-NPIPB14P-205ENST00000531894 PABPN1Q86U42 306 aaKnown RBP eCLIP17.13■□□□□ 0.337e-7■■■■□ 25.6
PDXDC2P-NPIPB14P-205ENST00000531894 SUPT16HQ9Y5B9 1047 aaKnown RBP17.12■□□□□ 0.33
PDXDC2P-NPIPB14P-205ENST00000531894 TRIM52Q96A61 297 aa17.08■□□□□ 0.32
PDXDC2P-NPIPB14P-205ENST00000531894 IRX6P78412 446 aaPredicted RBP17.08■□□□□ 0.32
PDXDC2P-NPIPB14P-205ENST00000531894 NBR1Q14596 966 aa17.07■□□□□ 0.32
PDXDC2P-NPIPB14P-205ENST00000531894 RTN4Q9NQC3 1192 aaKnown RBP17.07■□□□□ 0.32
PDXDC2P-NPIPB14P-205ENST00000531894 HIRIP3Q9BW71 556 aaPredicted RBP17.04■□□□□ 0.32
PDXDC2P-NPIPB14P-205ENST00000531894 WIZO95785 1651 aa17.02■□□□□ 0.32
PDXDC2P-NPIPB14P-205ENST00000531894 TSHZ2Q9NRE2 1034 aa16.99■□□□□ 0.31
PDXDC2P-NPIPB14P-205ENST00000531894 DDX10Q13206 875 aaKnown RBP16.98■□□□□ 0.31
PDXDC2P-NPIPB14P-205ENST00000531894 CCDC136Q96JN2 1154 aa16.96■□□□□ 0.31
PDXDC2P-NPIPB14P-205ENST00000531894 BAZ1AQ9NRL2 1556 aaPredicted RBP16.96■□□□□ 0.31
PDXDC2P-NPIPB14P-205ENST00000531894 POLR3GLQ9BT43 218 aa16.94■□□□□ 0.3
PDXDC2P-NPIPB14P-205ENST00000531894 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.91■□□□□ 0.3
PDXDC2P-NPIPB14P-205ENST00000531894 CDK11AQ9UQ88 783 aaPredicted RBP16.91■□□□□ 0.3
PDXDC2P-NPIPB14P-205ENST00000531894 KCNH8Q96L42 1107 aa16.87■□□□□ 0.29
PDXDC2P-NPIPB14P-205ENST00000531894 SENP3-EIF4A1A0A087X0R7 540 aa16.85■□□□□ 0.29
PDXDC2P-NPIPB14P-205ENST00000531894 SMARCA4P51532 1647 aa16.8■□□□□ 0.28
PDXDC2P-NPIPB14P-205ENST00000531894 UNC13AQ9UPW8 1703 aa16.8■□□□□ 0.28
PDXDC2P-NPIPB14P-205ENST00000531894 FAM50AQ14320 339 aaKnown RBP16.8■□□□□ 0.28
PDXDC2P-NPIPB14P-205ENST00000531894 ANO8Q9HCE9 1232 aaPredicted RBP16.78■□□□□ 0.28
PDXDC2P-NPIPB14P-205ENST00000531894 RBM19Q9Y4C8 960 aaKnown RBP16.78■□□□□ 0.28
PDXDC2P-NPIPB14P-205ENST00000531894 ANP32CO43423 234 aa16.78■□□□□ 0.28
PDXDC2P-NPIPB14P-205ENST00000531894 DEKP35659 375 aaKnown RBP16.76■□□□□ 0.27
PDXDC2P-NPIPB14P-205ENST00000531894 HNRNPUQ00839 825 aaKnown RBP eCLIP16.75■□□□□ 0.27
PDXDC2P-NPIPB14P-205ENST00000531894 DAXXQ9UER7 740 aaPredicted RBP16.74■□□□□ 0.27
PDXDC2P-NPIPB14P-205ENST00000531894 TOP2AP11388 1531 aaKnown RBP16.74■□□□□ 0.27
PDXDC2P-NPIPB14P-205ENST00000531894 NPM2Q86SE8 214 aaKnown RBP16.74■□□□□ 0.27
PDXDC2P-NPIPB14P-205ENST00000531894 CCDC88BA6NC98 1476 aa16.73■□□□□ 0.27
PDXDC2P-NPIPB14P-205ENST00000531894 CEP162Q5TB80 1403 aa16.7■□□□□ 0.26
PDXDC2P-NPIPB14P-205ENST00000531894 BICRAQ9NZM4 1560 aa16.69■□□□□ 0.26
PDXDC2P-NPIPB14P-205ENST00000531894 CLSPNQ9HAW4 1339 aa16.65■□□□□ 0.26
PDXDC2P-NPIPB14P-205ENST00000531894 ABCC8Q09428 1581 aa16.64■□□□□ 0.25
PDXDC2P-NPIPB14P-205ENST00000531894 SMARCA2P51531 1590 aa16.63■□□□□ 0.25
PDXDC2P-NPIPB14P-205ENST00000531894 MYT1LQ9UL68 1186 aa16.63■□□□□ 0.25
PDXDC2P-NPIPB14P-205ENST00000531894 FAM9BQ8IZU0 186 aa16.6■□□□□ 0.25
PDXDC2P-NPIPB14P-205ENST00000531894 GLIPR1L2Q4G1C9 344 aa16.59■□□□□ 0.25
PDXDC2P-NPIPB14P-205ENST00000531894 ANP32AP39687 249 aaKnown RBP16.57■□□□□ 0.24
PDXDC2P-NPIPB14P-205ENST00000531894 P3H3Q8IVL6 736 aa16.57■□□□□ 0.24
PDXDC2P-NPIPB14P-205ENST00000531894 SIN3AQ96ST3 1273 aa16.55■□□□□ 0.24
PDXDC2P-NPIPB14P-205ENST00000531894 EIF4G1Q04637 1599 aaKnown RBP16.52■□□□□ 0.24
PDXDC2P-NPIPB14P-205ENST00000531894 B4GALNT3Q6L9W6 998 aa16.52■□□□□ 0.23
PDXDC2P-NPIPB14P-205ENST00000531894 SALL2Q9Y467 1007 aaPredicted RBP16.51■□□□□ 0.23
PDXDC2P-NPIPB14P-205ENST00000531894 BAZ1BQ9UIG0 1483 aaKnown RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms