RNA–Protein interactions for RNA: ENST00000348986.3

CHRD-202, Transcript of chordin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHRD, Length 3,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-202ENST00000348986 NISCHQ9Y2I1 1504 aa37.05■■■■□ 3.52
CHRD-202ENST00000348986 SHROOM4Q9ULL8 1493 aa32.03■■■□□ 2.72
CHRD-202ENST00000348986 DCAF8L2P0C7V8 631 aa31.58■■■□□ 2.65
CHRD-202ENST00000348986 SUPT5HO00267 1087 aaKnown RBP31.33■■■□□ 2.61
CHRD-202ENST00000348986 CCDC180Q9P1Z9 1646 aa31.32■■■□□ 2.6
CHRD-202ENST00000348986 ZCCHC6Q5VYS8 1495 aaKnown RBP31.23■■■□□ 2.59
CHRD-202ENST00000348986 DCAF1Q9Y4B6 1507 aa30.13■■■□□ 2.41
CHRD-202ENST00000348986 CHIC1Q5VXU3 224 aa30.06■■■□□ 2.4
CHRD-202ENST00000348986 ABCC9O60706 1549 aa29.82■■■□□ 2.36
CHRD-202ENST00000348986 MYO15BQ96JP2 1530 aa29.81■■■□□ 2.36
CHRD-202ENST00000348986 SCRIBQ14160 1630 aa29.76■■■□□ 2.35
CHRD-202ENST00000348986 LOC105371045A0A1W2PR82 267 aa29.4■■■□□ 2.3
CHRD-202ENST00000348986 RSF1Q96T23 1441 aaPredicted RBP29.35■■■□□ 2.29
CHRD-202ENST00000348986 NACADO15069 1562 aa29.16■■■□□ 2.26
CHRD-202ENST00000348986 PCGF6Q9BYE7 350 aa29.13■■■□□ 2.25
CHRD-202ENST00000348986 CECR2Q9BXF3 1484 aa29.12■■■□□ 2.25
CHRD-202ENST00000348986 FAM9AQ8IZU1 332 aaPredicted RBP29.06■■■□□ 2.24
CHRD-202ENST00000348986 TRIM41Q8WV44 630 aa29.05■■■□□ 2.24
CHRD-202ENST00000348986 EHMT2Q96KQ7 1210 aa29.04■■■□□ 2.24
CHRD-202ENST00000348986 RB1CC1Q8TDY2 1594 aa29■■■□□ 2.23
CHRD-202ENST00000348986 MROH2BQ7Z745 1585 aa28.91■■■□□ 2.22
CHRD-202ENST00000348986 WIZO95785 1651 aa28.72■■■□□ 2.19
CHRD-202ENST00000348986 HRCP23327 699 aa28.7■■■□□ 2.19
CHRD-202ENST00000348986 PABPN1Q86U42 306 aaKnown RBP eCLIP28.68■■■□□ 2.182e-8■■■■□ 25.2
CHRD-202ENST00000348986 BAZ1AQ9NRL2 1556 aaPredicted RBP28.45■■■□□ 2.14
CHRD-202ENST00000348986 PPARGC1BQ86YN6 1023 aaKnown RBP28.45■■■□□ 2.14
CHRD-202ENST00000348986 TRIM26Q12899 539 aaPredicted RBP28.38■■■□□ 2.13
CHRD-202ENST00000348986 UNC13AQ9UPW8 1703 aa28.28■■■□□ 2.12
CHRD-202ENST00000348986 SMARCA4P51532 1647 aa28.23■■■□□ 2.11
CHRD-202ENST00000348986 CCDC88BA6NC98 1476 aa28.18■■■□□ 2.1
CHRD-202ENST00000348986 TOP2AP11388 1531 aaKnown RBP28.13■■■□□ 2.09
CHRD-202ENST00000348986 ABCC8Q09428 1581 aa28.12■■■□□ 2.09
CHRD-202ENST00000348986 BICRAQ9NZM4 1560 aa28.03■■■□□ 2.08
CHRD-202ENST00000348986 SMARCA2P51531 1590 aa28.01■■■□□ 2.07
CHRD-202ENST00000348986 TTBK1Q5TCY1 1321 aaPredicted RBP27.98■■■□□ 2.07
CHRD-202ENST00000348986 EIF4G1Q04637 1599 aaKnown RBP27.94■■■□□ 2.06
CHRD-202ENST00000348986 SOGA1O94964 1423 aa27.86■■■□□ 2.05
CHRD-202ENST00000348986 UBTFP17480 764 aaKnown RBP27.8■■■□□ 2.04
CHRD-202ENST00000348986 RUSC2Q8N2Y8 1516 aa27.74■■■□□ 2.03
CHRD-202ENST00000348986 CSRNP3Q8WYN3 585 aa27.71■■■□□ 2.03
CHRD-202ENST00000348986 ATAD2BQ9ULI0 1458 aa27.66■■■□□ 2.02
CHRD-202ENST00000348986 BAZ1BQ9UIG0 1483 aaKnown RBP27.64■■■□□ 2.01
CHRD-202ENST00000348986 WRNQ14191 1432 aaPredicted RBP eCLIP27.62■■■□□ 2.01
CHRD-202ENST00000348986 RANGAP1P46060 587 aaPredicted RBP27.6■■■□□ 2.01
CHRD-202ENST00000348986 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.55■■■□□ 2
CHRD-202ENST00000348986 CEP162Q5TB80 1403 aa27.55■■■□□ 2
CHRD-202ENST00000348986 ZEB1P37275 1124 aaPredicted RBP27.53■■■□□ 2
CHRD-202ENST00000348986 PEG3Q9GZU2 1588 aa27.51■■□□□ 1.99
CHRD-202ENST00000348986 TNIKQ9UKE5 1360 aa27.43■■□□□ 1.98
CHRD-202ENST00000348986 CCER1Q8TC90 406 aaPredicted RBP27.42■■□□□ 1.98
CHRD-202ENST00000348986 SYNJ1O43426 1573 aa27.4■■□□□ 1.98
CHRD-202ENST00000348986 EEA1Q15075 1411 aa27.38■■□□□ 1.97
CHRD-202ENST00000348986 GOLGA3Q08378 1498 aa27.32■■□□□ 1.96
CHRD-202ENST00000348986 CEP164Q9UPV0 1460 aa27.17■■□□□ 1.94
CHRD-202ENST00000348986 RAPGEF2Q9Y4G8 1499 aa27.13■■□□□ 1.93
CHRD-202ENST00000348986 CLIP1P30622 1438 aa27.12■■□□□ 1.93
CHRD-202ENST00000348986 HNRNPUL2Q1KMD3 747 aaKnown RBP27.09■■□□□ 1.93
CHRD-202ENST00000348986 APLP2Q06481 763 aa27.08■■□□□ 1.93
CHRD-202ENST00000348986 NCAPD3P42695 1498 aa27.08■■□□□ 1.93
CHRD-202ENST00000348986 TOP2BQ02880 1626 aa26.97■■□□□ 1.91
CHRD-202ENST00000348986 KIF21BO75037 1637 aa26.96■■□□□ 1.91
CHRD-202ENST00000348986 HMGXB3Q12766 1538 aa26.94■■□□□ 1.9
CHRD-202ENST00000348986 CUX1P39880 1505 aa26.88■■□□□ 1.89
CHRD-202ENST00000348986 VPS8Q8N3P4 1428 aa26.86■■□□□ 1.89
CHRD-202ENST00000348986 CFTRP13569 1480 aa26.83■■□□□ 1.89
CHRD-202ENST00000348986 KIF27Q86VH2 1401 aa26.78■■□□□ 1.88
CHRD-202ENST00000348986 BIVM-ERCC5R4GMW8 1640 aa26.78■■□□□ 1.88
CHRD-202ENST00000348986 PRXQ9BXM0 1461 aa26.72■■□□□ 1.87
CHRD-202ENST00000348986 CADPSQ9ULU8 1353 aa26.7■■□□□ 1.86
CHRD-202ENST00000348986 KANK4Q5T7N3 995 aaPredicted RBP26.69■■□□□ 1.86
CHRD-202ENST00000348986 CUX2O14529 1486 aa26.65■■□□□ 1.86
CHRD-202ENST00000348986 DIEXFQ68CQ4 756 aaKnown RBP26.65■■□□□ 1.86
CHRD-202ENST00000348986 CC2D2AQ9P2K1 1620 aa26.61■■□□□ 1.85
CHRD-202ENST00000348986 ITGAEP38570 1179 aa26.59■■□□□ 1.85
CHRD-202ENST00000348986 ARAP1Q96P48 1450 aa26.58■■□□□ 1.85
CHRD-202ENST00000348986 ERICH3Q5RHP9 1530 aa26.57■■□□□ 1.84
CHRD-202ENST00000348986 P3H3Q8IVL6 736 aa26.57■■□□□ 1.84
CHRD-202ENST00000348986 ATP1B4Q9UN42 357 aaPredicted RBP26.55■■□□□ 1.84
CHRD-202ENST00000348986 IGF1RP08069 1367 aa26.54■■□□□ 1.84
CHRD-202ENST00000348986 FGD5Q6ZNL6 1462 aa26.51■■□□□ 1.83
CHRD-202ENST00000348986 CARMIL1Q5VZK9 1371 aa26.47■■□□□ 1.83
CHRD-202ENST00000348986 NESP48681 1621 aa26.46■■□□□ 1.83
CHRD-202ENST00000348986 FANCD2Q9BXW9 1451 aa26.45■■□□□ 1.82
CHRD-202ENST00000348986 ZNF316A6NFI3 1004 aaPredicted RBP26.44■■□□□ 1.82
CHRD-202ENST00000348986 DNAJC5BQ9UF47 199 aa26.44■■□□□ 1.82
CHRD-202ENST00000348986 ARHGAP35Q9NRY4 1499 aa26.43■■□□□ 1.82
CHRD-202ENST00000348986 RAD54L2Q9Y4B4 1467 aa26.39■■□□□ 1.82
CHRD-202ENST00000348986 SCAF1Q9H7N4 1312 aaKnown RBP26.38■■□□□ 1.81
CHRD-202ENST00000348986 PRDM2Q13029 1718 aa26.28■■□□□ 1.8
CHRD-202ENST00000348986 YTHDC1Q96MU7 727 aaKnown RBP26.28■■□□□ 1.8
CHRD-202ENST00000348986 PELP1Q8IZL8 1130 aaKnown RBP26.28■■□□□ 1.8
CHRD-202ENST00000348986 NEUROD1Q13562 356 aa26.27■■□□□ 1.8
CHRD-202ENST00000348986 FAM50AQ14320 339 aaKnown RBP26.21■■□□□ 1.79
CHRD-202ENST00000348986 CCNB3Q8WWL7 1395 aa26.21■■□□□ 1.79
CHRD-202ENST00000348986 POLA1P09884 1462 aaPredicted RBP26.2■■□□□ 1.78
CHRD-202ENST00000348986 TOPBP1Q92547 1522 aa26.19■■□□□ 1.78
CHRD-202ENST00000348986 TDRD9Q8NDG6 1382 aaKnown RBP26.19■■□□□ 1.78
CHRD-202ENST00000348986 DHX57Q6P158 1386 aaKnown RBP26.17■■□□□ 1.78
CHRD-202ENST00000348986 ACIN1Q9UKV3 1341 aaKnown RBP26.17■■□□□ 1.78
CHRD-202ENST00000348986 FHOD3Q2V2M9 1422 aa26.14■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms