RNA–Protein interactions for RNA: ENST00000348986.3

CHRD-202, Transcript of chordin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHRD, Length 3,155 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-202ENST00000348986 NISCHQ9Y2I1 1504 aa37.05■■■■□ 3.52
CHRD-202ENST00000348986 SHROOM4Q9ULL8 1493 aa32.03■■■□□ 2.72
CHRD-202ENST00000348986 DCAF8L2P0C7V8 631 aa31.58■■■□□ 2.65
CHRD-202ENST00000348986 SUPT5HO00267 1087 aaKnown RBP31.33■■■□□ 2.61
CHRD-202ENST00000348986 CCDC180Q9P1Z9 1646 aa31.32■■■□□ 2.6
CHRD-202ENST00000348986 ZCCHC6Q5VYS8 1495 aaKnown RBP31.23■■■□□ 2.59
CHRD-202ENST00000348986 DCAF1Q9Y4B6 1507 aa30.13■■■□□ 2.41
CHRD-202ENST00000348986 CHIC1Q5VXU3 224 aa30.06■■■□□ 2.4
CHRD-202ENST00000348986 ABCC9O60706 1549 aa29.82■■■□□ 2.36
CHRD-202ENST00000348986 MYO15BQ96JP2 1530 aa29.81■■■□□ 2.36
CHRD-202ENST00000348986 SCRIBQ14160 1630 aa29.76■■■□□ 2.35
CHRD-202ENST00000348986 LOC105371045A0A1W2PR82 267 aa29.4■■■□□ 2.3
CHRD-202ENST00000348986 RSF1Q96T23 1441 aaPredicted RBP29.35■■■□□ 2.29
CHRD-202ENST00000348986 NACADO15069 1562 aa29.16■■■□□ 2.26
CHRD-202ENST00000348986 PCGF6Q9BYE7 350 aa29.13■■■□□ 2.25
CHRD-202ENST00000348986 CECR2Q9BXF3 1484 aa29.12■■■□□ 2.25
CHRD-202ENST00000348986 FAM9AQ8IZU1 332 aaPredicted RBP29.06■■■□□ 2.24
CHRD-202ENST00000348986 TRIM41Q8WV44 630 aa29.05■■■□□ 2.24
CHRD-202ENST00000348986 EHMT2Q96KQ7 1210 aa29.04■■■□□ 2.24
CHRD-202ENST00000348986 RB1CC1Q8TDY2 1594 aa29■■■□□ 2.23
CHRD-202ENST00000348986 MROH2BQ7Z745 1585 aa28.91■■■□□ 2.22
CHRD-202ENST00000348986 WIZO95785 1651 aa28.72■■■□□ 2.19
CHRD-202ENST00000348986 HRCP23327 699 aa28.7■■■□□ 2.19
CHRD-202ENST00000348986 PABPN1Q86U42 306 aaKnown RBP eCLIP28.68■■■□□ 2.182e-8■■■■□ 25.2
CHRD-202ENST00000348986 BAZ1AQ9NRL2 1556 aaPredicted RBP28.45■■■□□ 2.14
CHRD-202ENST00000348986 PPARGC1BQ86YN6 1023 aaKnown RBP28.45■■■□□ 2.14
CHRD-202ENST00000348986 TRIM26Q12899 539 aaPredicted RBP28.38■■■□□ 2.13
CHRD-202ENST00000348986 UNC13AQ9UPW8 1703 aa28.28■■■□□ 2.12
CHRD-202ENST00000348986 SMARCA4P51532 1647 aa28.23■■■□□ 2.11
CHRD-202ENST00000348986 CCDC88BA6NC98 1476 aa28.18■■■□□ 2.1
CHRD-202ENST00000348986 TOP2AP11388 1531 aaKnown RBP28.13■■■□□ 2.09
CHRD-202ENST00000348986 ABCC8Q09428 1581 aa28.12■■■□□ 2.09
CHRD-202ENST00000348986 BICRAQ9NZM4 1560 aa28.03■■■□□ 2.08
CHRD-202ENST00000348986 SMARCA2P51531 1590 aa28.01■■■□□ 2.07
CHRD-202ENST00000348986 TTBK1Q5TCY1 1321 aaPredicted RBP27.98■■■□□ 2.07
CHRD-202ENST00000348986 EIF4G1Q04637 1599 aaKnown RBP27.94■■■□□ 2.06
CHRD-202ENST00000348986 SOGA1O94964 1423 aa27.86■■■□□ 2.05
CHRD-202ENST00000348986 UBTFP17480 764 aaKnown RBP27.8■■■□□ 2.04
CHRD-202ENST00000348986 RUSC2Q8N2Y8 1516 aa27.74■■■□□ 2.03
CHRD-202ENST00000348986 CSRNP3Q8WYN3 585 aa27.71■■■□□ 2.03
CHRD-202ENST00000348986 ATAD2BQ9ULI0 1458 aa27.66■■■□□ 2.02
CHRD-202ENST00000348986 BAZ1BQ9UIG0 1483 aaKnown RBP27.64■■■□□ 2.01
CHRD-202ENST00000348986 WRNQ14191 1432 aaPredicted RBP eCLIP27.62■■■□□ 2.01
CHRD-202ENST00000348986 RANGAP1P46060 587 aaPredicted RBP27.6■■■□□ 2.01
CHRD-202ENST00000348986 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.55■■■□□ 2
CHRD-202ENST00000348986 CEP162Q5TB80 1403 aa27.55■■■□□ 2
CHRD-202ENST00000348986 ZEB1P37275 1124 aaPredicted RBP27.53■■■□□ 2
CHRD-202ENST00000348986 PEG3Q9GZU2 1588 aa27.51■■□□□ 1.99
CHRD-202ENST00000348986 TNIKQ9UKE5 1360 aa27.43■■□□□ 1.98
CHRD-202ENST00000348986 CCER1Q8TC90 406 aaPredicted RBP27.42■■□□□ 1.98
CHRD-202ENST00000348986 SYNJ1O43426 1573 aa27.4■■□□□ 1.98
CHRD-202ENST00000348986 EEA1Q15075 1411 aa27.38■■□□□ 1.97
CHRD-202ENST00000348986 GOLGA3Q08378 1498 aa27.32■■□□□ 1.96
CHRD-202ENST00000348986 CEP164Q9UPV0 1460 aa27.17■■□□□ 1.94
CHRD-202ENST00000348986 RAPGEF2Q9Y4G8 1499 aa27.13■■□□□ 1.93
CHRD-202ENST00000348986 CLIP1P30622 1438 aa27.12■■□□□ 1.93
CHRD-202ENST00000348986 HNRNPUL2Q1KMD3 747 aaKnown RBP27.09■■□□□ 1.93
CHRD-202ENST00000348986 APLP2Q06481 763 aa27.08■■□□□ 1.93
CHRD-202ENST00000348986 NCAPD3P42695 1498 aa27.08■■□□□ 1.93
CHRD-202ENST00000348986 TOP2BQ02880 1626 aa26.97■■□□□ 1.91
CHRD-202ENST00000348986 KIF21BO75037 1637 aa26.96■■□□□ 1.91
CHRD-202ENST00000348986 HMGXB3Q12766 1538 aa26.94■■□□□ 1.9
CHRD-202ENST00000348986 CUX1P39880 1505 aa26.88■■□□□ 1.89
CHRD-202ENST00000348986 VPS8Q8N3P4 1428 aa26.86■■□□□ 1.89
CHRD-202ENST00000348986 CFTRP13569 1480 aa26.83■■□□□ 1.89
CHRD-202ENST00000348986 KIF27Q86VH2 1401 aa26.78■■□□□ 1.88
CHRD-202ENST00000348986 BIVM-ERCC5R4GMW8 1640 aa26.78■■□□□ 1.88
CHRD-202ENST00000348986 PRXQ9BXM0 1461 aa26.72■■□□□ 1.87
CHRD-202ENST00000348986 CADPSQ9ULU8 1353 aa26.7■■□□□ 1.86
CHRD-202ENST00000348986 KANK4Q5T7N3 995 aaPredicted RBP26.69■■□□□ 1.86
CHRD-202ENST00000348986 CUX2O14529 1486 aa26.65■■□□□ 1.86
CHRD-202ENST00000348986 DIEXFQ68CQ4 756 aaKnown RBP26.65■■□□□ 1.86
CHRD-202ENST00000348986 CC2D2AQ9P2K1 1620 aa26.61■■□□□ 1.85
CHRD-202ENST00000348986 ITGAEP38570 1179 aa26.59■■□□□ 1.85
CHRD-202ENST00000348986 ARAP1Q96P48 1450 aa26.58■■□□□ 1.85
CHRD-202ENST00000348986 ERICH3Q5RHP9 1530 aa26.57■■□□□ 1.84
CHRD-202ENST00000348986 P3H3Q8IVL6 736 aa26.57■■□□□ 1.84
CHRD-202ENST00000348986 ATP1B4Q9UN42 357 aaPredicted RBP26.55■■□□□ 1.84
CHRD-202ENST00000348986 IGF1RP08069 1367 aa26.54■■□□□ 1.84
CHRD-202ENST00000348986 FGD5Q6ZNL6 1462 aa26.51■■□□□ 1.83
CHRD-202ENST00000348986 CARMIL1Q5VZK9 1371 aa26.47■■□□□ 1.83
CHRD-202ENST00000348986 NESP48681 1621 aa26.46■■□□□ 1.83
CHRD-202ENST00000348986 FANCD2Q9BXW9 1451 aa26.45■■□□□ 1.82
CHRD-202ENST00000348986 ZNF316A6NFI3 1004 aaPredicted RBP26.44■■□□□ 1.82
CHRD-202ENST00000348986 DNAJC5BQ9UF47 199 aa26.44■■□□□ 1.82
CHRD-202ENST00000348986 ARHGAP35Q9NRY4 1499 aa26.43■■□□□ 1.82
CHRD-202ENST00000348986 RAD54L2Q9Y4B4 1467 aa26.39■■□□□ 1.82
CHRD-202ENST00000348986 SCAF1Q9H7N4 1312 aaKnown RBP26.38■■□□□ 1.81
CHRD-202ENST00000348986 PRDM2Q13029 1718 aa26.28■■□□□ 1.8
CHRD-202ENST00000348986 YTHDC1Q96MU7 727 aaKnown RBP26.28■■□□□ 1.8
CHRD-202ENST00000348986 PELP1Q8IZL8 1130 aaKnown RBP26.28■■□□□ 1.8
CHRD-202ENST00000348986 NEUROD1Q13562 356 aa26.27■■□□□ 1.8
CHRD-202ENST00000348986 FAM50AQ14320 339 aaKnown RBP26.21■■□□□ 1.79
CHRD-202ENST00000348986 CCNB3Q8WWL7 1395 aa26.21■■□□□ 1.79
CHRD-202ENST00000348986 POLA1P09884 1462 aaPredicted RBP26.2■■□□□ 1.78
CHRD-202ENST00000348986 TOPBP1Q92547 1522 aa26.19■■□□□ 1.78
CHRD-202ENST00000348986 TDRD9Q8NDG6 1382 aaKnown RBP26.19■■□□□ 1.78
CHRD-202ENST00000348986 DHX57Q6P158 1386 aaKnown RBP26.17■■□□□ 1.78
CHRD-202ENST00000348986 ACIN1Q9UKV3 1341 aaKnown RBP26.17■■□□□ 1.78
CHRD-202ENST00000348986 FHOD3Q2V2M9 1422 aa26.14■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms