RNA–Protein interactions for RNA: ENST00000448472.5

CHRD-205, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,547 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-205ENST00000448472 NISCHQ9Y2I1 1504 aa30.38■■■□□ 2.45
CHRD-205ENST00000448472 SHROOM4Q9ULL8 1493 aa27.36■■□□□ 1.97
CHRD-205ENST00000448472 SUPT5HO00267 1087 aaKnown RBP27.18■■□□□ 1.94
CHRD-205ENST00000448472 DCAF8L2P0C7V8 631 aa26.58■■□□□ 1.85
CHRD-205ENST00000448472 PCGF6Q9BYE7 350 aa26.27■■□□□ 1.8
CHRD-205ENST00000448472 HRCP23327 699 aa26.17■■□□□ 1.78
CHRD-205ENST00000448472 CHIC1Q5VXU3 224 aa26.1■■□□□ 1.77
CHRD-205ENST00000448472 PPARGC1BQ86YN6 1023 aaKnown RBP25.93■■□□□ 1.74
CHRD-205ENST00000448472 MYO15BQ96JP2 1530 aa25.88■■□□□ 1.73
CHRD-205ENST00000448472 LOC105371045A0A1W2PR82 267 aa25.72■■□□□ 1.71
CHRD-205ENST00000448472 ZCCHC6Q5VYS8 1495 aaKnown RBP25.66■■□□□ 1.7
CHRD-205ENST00000448472 EHMT2Q96KQ7 1210 aa25.41■■□□□ 1.66
CHRD-205ENST00000448472 FAM9AQ8IZU1 332 aaPredicted RBP25.27■■□□□ 1.64
CHRD-205ENST00000448472 TRIM26Q12899 539 aaPredicted RBP25.27■■□□□ 1.64
CHRD-205ENST00000448472 CCDC180Q9P1Z9 1646 aa25.11■■□□□ 1.61
CHRD-205ENST00000448472 DCAF1Q9Y4B6 1507 aa25.09■■□□□ 1.61
CHRD-205ENST00000448472 TRIM41Q8WV44 630 aa25.04■■□□□ 1.6
CHRD-205ENST00000448472 ZEB1P37275 1124 aaPredicted RBP24.88■■□□□ 1.57
CHRD-205ENST00000448472 TTBK1Q5TCY1 1321 aaPredicted RBP24.65■■□□□ 1.54
CHRD-205ENST00000448472 CCER1Q8TC90 406 aaPredicted RBP24.53■■□□□ 1.52
CHRD-205ENST00000448472 SCAF1Q9H7N4 1312 aaKnown RBP24.52■■□□□ 1.52
CHRD-205ENST00000448472 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.51■■□□□ 1.51
CHRD-205ENST00000448472 PELP1Q8IZL8 1130 aaKnown RBP24.5■■□□□ 1.51
CHRD-205ENST00000448472 RSF1Q96T23 1441 aaPredicted RBP24.42■■□□□ 1.5
CHRD-205ENST00000448472 SCRIBQ14160 1630 aa24.38■■□□□ 1.49
CHRD-205ENST00000448472 ABCC9O60706 1549 aa24.25■■□□□ 1.47
CHRD-205ENST00000448472 RB1CC1Q8TDY2 1594 aa24.2■■□□□ 1.46
CHRD-205ENST00000448472 DIEXFQ68CQ4 756 aaKnown RBP24.14■■□□□ 1.45
CHRD-205ENST00000448472 NEUROD1Q13562 356 aa24.14■■□□□ 1.45
CHRD-205ENST00000448472 CENPBP07199 599 aaPredicted RBP24.13■■□□□ 1.45
CHRD-205ENST00000448472 ACIN1Q9UKV3 1341 aaKnown RBP24.12■■□□□ 1.45
CHRD-205ENST00000448472 GTF3C3Q9Y5Q9 886 aa24.08■■□□□ 1.45
CHRD-205ENST00000448472 YTHDC1Q96MU7 727 aaKnown RBP24.06■■□□□ 1.44
CHRD-205ENST00000448472 UBTFP17480 764 aaKnown RBP23.98■■□□□ 1.43
CHRD-205ENST00000448472 CECR2Q9BXF3 1484 aa23.97■■□□□ 1.43
CHRD-205ENST00000448472 RANGAP1P46060 587 aaPredicted RBP23.82■■□□□ 1.4
CHRD-205ENST00000448472 MROH2BQ7Z745 1585 aa23.8■■□□□ 1.4
CHRD-205ENST00000448472 HNRNPUL2Q1KMD3 747 aaKnown RBP23.8■■□□□ 1.4
CHRD-205ENST00000448472 ZNF316A6NFI3 1004 aaPredicted RBP23.69■■□□□ 1.38
CHRD-205ENST00000448472 WIZO95785 1651 aa23.66■■□□□ 1.38
CHRD-205ENST00000448472 APLP2Q06481 763 aa23.61■■□□□ 1.37
CHRD-205ENST00000448472 CEP162Q5TB80 1403 aa23.59■■□□□ 1.37
CHRD-205ENST00000448472 CSRNP3Q8WYN3 585 aa23.58■■□□□ 1.37
CHRD-205ENST00000448472 ABCC8Q09428 1581 aa23.54■■□□□ 1.36
CHRD-205ENST00000448472 CCDC88BA6NC98 1476 aa23.52■■□□□ 1.36
CHRD-205ENST00000448472 MIER1Q8N108 512 aa23.52■■□□□ 1.36
CHRD-205ENST00000448472 SOGA1O94964 1423 aa23.51■■□□□ 1.35
CHRD-205ENST00000448472 NACADO15069 1562 aa23.4■■□□□ 1.34
CHRD-205ENST00000448472 TNIKQ9UKE5 1360 aa23.37■■□□□ 1.33
CHRD-205ENST00000448472 MYT1Q01538 1121 aa23.36■■□□□ 1.33
CHRD-205ENST00000448472 PABPN1Q86U42 306 aaKnown RBP eCLIP23.34■■□□□ 1.332e-8■■■■□ 25.2
CHRD-205ENST00000448472 RUSC2Q8N2Y8 1516 aa23.33■■□□□ 1.32
CHRD-205ENST00000448472 WRNQ14191 1432 aaPredicted RBP eCLIP23.3■■□□□ 1.32
CHRD-205ENST00000448472 BAZ1AQ9NRL2 1556 aaPredicted RBP23.3■■□□□ 1.32
CHRD-205ENST00000448472 ITGAEP38570 1179 aa23.18■■□□□ 1.3
CHRD-205ENST00000448472 GOLGA3Q08378 1498 aa23.18■■□□□ 1.3
CHRD-205ENST00000448472 CLIP1P30622 1438 aa23.13■■□□□ 1.29
CHRD-205ENST00000448472 EEA1Q15075 1411 aa23.12■■□□□ 1.29
CHRD-205ENST00000448472 TOP2AP11388 1531 aaKnown RBP23.11■■□□□ 1.29
CHRD-205ENST00000448472 SMARCA2P51531 1590 aa23.03■■□□□ 1.28
CHRD-205ENST00000448472 EIF4G1Q04637 1599 aaKnown RBP23.01■■□□□ 1.27
CHRD-205ENST00000448472 SMARCA4P51532 1647 aa22.97■■□□□ 1.27
CHRD-205ENST00000448472 CEP164Q9UPV0 1460 aa22.96■■□□□ 1.27
CHRD-205ENST00000448472 BCANQ96GW7 911 aa22.92■■□□□ 1.26
CHRD-205ENST00000448472 VPS8Q8N3P4 1428 aa22.9■■□□□ 1.26
CHRD-205ENST00000448472 SUPT16HQ9Y5B9 1047 aaKnown RBP22.87■■□□□ 1.25
CHRD-205ENST00000448472 RAPGEF2Q9Y4G8 1499 aa22.82■■□□□ 1.24
CHRD-205ENST00000448472 ATP1B4Q9UN42 357 aaPredicted RBP22.82■■□□□ 1.24
CHRD-205ENST00000448472 KANK4Q5T7N3 995 aaPredicted RBP22.81■■□□□ 1.24
CHRD-205ENST00000448472 DHX57Q6P158 1386 aaKnown RBP22.72■■□□□ 1.23
CHRD-205ENST00000448472 KCNH8Q96L42 1107 aa22.71■■□□□ 1.23
CHRD-205ENST00000448472 SYNJ1O43426 1573 aa22.69■■□□□ 1.22
CHRD-205ENST00000448472 DDX10Q13206 875 aaKnown RBP22.68■■□□□ 1.22
CHRD-205ENST00000448472 HIRIP3Q9BW71 556 aaPredicted RBP22.65■■□□□ 1.22
CHRD-205ENST00000448472 FAM50AQ14320 339 aaKnown RBP22.65■■□□□ 1.22
CHRD-205ENST00000448472 FKBP8Q14318 412 aa22.64■■□□□ 1.21
CHRD-205ENST00000448472 CLSPNQ9HAW4 1339 aa22.63■■□□□ 1.21
CHRD-205ENST00000448472 NEFLP07196 543 aa22.62■■□□□ 1.21
CHRD-205ENST00000448472 KIF21BO75037 1637 aa22.61■■□□□ 1.21
CHRD-205ENST00000448472 TSHZ2Q9NRE2 1034 aa22.6■■□□□ 1.21
CHRD-205ENST00000448472 BAZ1BQ9UIG0 1483 aaKnown RBP22.58■■□□□ 1.2
CHRD-205ENST00000448472 P3H3Q8IVL6 736 aa22.54■■□□□ 1.2
CHRD-205ENST00000448472 TRIM52Q96A61 297 aa22.54■■□□□ 1.2
CHRD-205ENST00000448472 SIN3AQ96ST3 1273 aa22.53■■□□□ 1.2
CHRD-205ENST00000448472 CCNB3Q8WWL7 1395 aa22.5■■□□□ 1.19
CHRD-205ENST00000448472 ANP32EQ9BTT0 268 aa22.44■■□□□ 1.18
CHRD-205ENST00000448472 ATAD2BQ9ULI0 1458 aa22.44■■□□□ 1.18
CHRD-205ENST00000448472 UNC13AQ9UPW8 1703 aa22.41■■□□□ 1.18
CHRD-205ENST00000448472 RAB3GAP2Q9H2M9 1393 aa22.41■■□□□ 1.18
CHRD-205ENST00000448472 ANP32CO43423 234 aa22.4■■□□□ 1.18
CHRD-205ENST00000448472 ARAP1Q96P48 1450 aa22.38■■□□□ 1.17
CHRD-205ENST00000448472 KIF27Q86VH2 1401 aa22.34■■□□□ 1.17
CHRD-205ENST00000448472 IRX6P78412 446 aaPredicted RBP22.27■■□□□ 1.16
CHRD-205ENST00000448472 RRBP1Q9P2E9 1410 aaKnown RBP22.27■■□□□ 1.15
CHRD-205ENST00000448472 BICRAQ9NZM4 1560 aa22.26■■□□□ 1.15
CHRD-205ENST00000448472 PRXQ9BXM0 1461 aa22.25■■□□□ 1.15
CHRD-205ENST00000448472 ERICH6Q7L0X2 663 aa22.24■■□□□ 1.15
CHRD-205ENST00000448472 SETD5Q9C0A6 1442 aa22.22■■□□□ 1.15
CHRD-205ENST00000448472 RBM19Q9Y4C8 960 aaKnown RBP22.22■■□□□ 1.15
CHRD-205ENST00000448472 TOP2BQ02880 1626 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms