RNA–Protein interactions for RNA: ENST00000448472.5

CHRD-205, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,547 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-205ENST00000448472 NISCHQ9Y2I1 1504 aa30.38■■■□□ 2.45
CHRD-205ENST00000448472 SHROOM4Q9ULL8 1493 aa27.36■■□□□ 1.97
CHRD-205ENST00000448472 SUPT5HO00267 1087 aaKnown RBP27.18■■□□□ 1.94
CHRD-205ENST00000448472 DCAF8L2P0C7V8 631 aa26.58■■□□□ 1.85
CHRD-205ENST00000448472 PCGF6Q9BYE7 350 aa26.27■■□□□ 1.8
CHRD-205ENST00000448472 HRCP23327 699 aa26.17■■□□□ 1.78
CHRD-205ENST00000448472 CHIC1Q5VXU3 224 aa26.1■■□□□ 1.77
CHRD-205ENST00000448472 PPARGC1BQ86YN6 1023 aaKnown RBP25.93■■□□□ 1.74
CHRD-205ENST00000448472 MYO15BQ96JP2 1530 aa25.88■■□□□ 1.73
CHRD-205ENST00000448472 LOC105371045A0A1W2PR82 267 aa25.72■■□□□ 1.71
CHRD-205ENST00000448472 ZCCHC6Q5VYS8 1495 aaKnown RBP25.66■■□□□ 1.7
CHRD-205ENST00000448472 EHMT2Q96KQ7 1210 aa25.41■■□□□ 1.66
CHRD-205ENST00000448472 FAM9AQ8IZU1 332 aaPredicted RBP25.27■■□□□ 1.64
CHRD-205ENST00000448472 TRIM26Q12899 539 aaPredicted RBP25.27■■□□□ 1.64
CHRD-205ENST00000448472 CCDC180Q9P1Z9 1646 aa25.11■■□□□ 1.61
CHRD-205ENST00000448472 DCAF1Q9Y4B6 1507 aa25.09■■□□□ 1.61
CHRD-205ENST00000448472 TRIM41Q8WV44 630 aa25.04■■□□□ 1.6
CHRD-205ENST00000448472 ZEB1P37275 1124 aaPredicted RBP24.88■■□□□ 1.57
CHRD-205ENST00000448472 TTBK1Q5TCY1 1321 aaPredicted RBP24.65■■□□□ 1.54
CHRD-205ENST00000448472 CCER1Q8TC90 406 aaPredicted RBP24.53■■□□□ 1.52
CHRD-205ENST00000448472 SCAF1Q9H7N4 1312 aaKnown RBP24.52■■□□□ 1.52
CHRD-205ENST00000448472 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.51■■□□□ 1.51
CHRD-205ENST00000448472 PELP1Q8IZL8 1130 aaKnown RBP24.5■■□□□ 1.51
CHRD-205ENST00000448472 RSF1Q96T23 1441 aaPredicted RBP24.42■■□□□ 1.5
CHRD-205ENST00000448472 SCRIBQ14160 1630 aa24.38■■□□□ 1.49
CHRD-205ENST00000448472 ABCC9O60706 1549 aa24.25■■□□□ 1.47
CHRD-205ENST00000448472 RB1CC1Q8TDY2 1594 aa24.2■■□□□ 1.46
CHRD-205ENST00000448472 DIEXFQ68CQ4 756 aaKnown RBP24.14■■□□□ 1.45
CHRD-205ENST00000448472 NEUROD1Q13562 356 aa24.14■■□□□ 1.45
CHRD-205ENST00000448472 CENPBP07199 599 aaPredicted RBP24.13■■□□□ 1.45
CHRD-205ENST00000448472 ACIN1Q9UKV3 1341 aaKnown RBP24.12■■□□□ 1.45
CHRD-205ENST00000448472 GTF3C3Q9Y5Q9 886 aa24.08■■□□□ 1.45
CHRD-205ENST00000448472 YTHDC1Q96MU7 727 aaKnown RBP24.06■■□□□ 1.44
CHRD-205ENST00000448472 UBTFP17480 764 aaKnown RBP23.98■■□□□ 1.43
CHRD-205ENST00000448472 CECR2Q9BXF3 1484 aa23.97■■□□□ 1.43
CHRD-205ENST00000448472 RANGAP1P46060 587 aaPredicted RBP23.82■■□□□ 1.4
CHRD-205ENST00000448472 MROH2BQ7Z745 1585 aa23.8■■□□□ 1.4
CHRD-205ENST00000448472 HNRNPUL2Q1KMD3 747 aaKnown RBP23.8■■□□□ 1.4
CHRD-205ENST00000448472 ZNF316A6NFI3 1004 aaPredicted RBP23.69■■□□□ 1.38
CHRD-205ENST00000448472 WIZO95785 1651 aa23.66■■□□□ 1.38
CHRD-205ENST00000448472 APLP2Q06481 763 aa23.61■■□□□ 1.37
CHRD-205ENST00000448472 CEP162Q5TB80 1403 aa23.59■■□□□ 1.37
CHRD-205ENST00000448472 CSRNP3Q8WYN3 585 aa23.58■■□□□ 1.37
CHRD-205ENST00000448472 ABCC8Q09428 1581 aa23.54■■□□□ 1.36
CHRD-205ENST00000448472 CCDC88BA6NC98 1476 aa23.52■■□□□ 1.36
CHRD-205ENST00000448472 MIER1Q8N108 512 aa23.52■■□□□ 1.36
CHRD-205ENST00000448472 SOGA1O94964 1423 aa23.51■■□□□ 1.35
CHRD-205ENST00000448472 NACADO15069 1562 aa23.4■■□□□ 1.34
CHRD-205ENST00000448472 TNIKQ9UKE5 1360 aa23.37■■□□□ 1.33
CHRD-205ENST00000448472 MYT1Q01538 1121 aa23.36■■□□□ 1.33
CHRD-205ENST00000448472 PABPN1Q86U42 306 aaKnown RBP eCLIP23.34■■□□□ 1.332e-8■■■■□ 25.2
CHRD-205ENST00000448472 RUSC2Q8N2Y8 1516 aa23.33■■□□□ 1.32
CHRD-205ENST00000448472 WRNQ14191 1432 aaPredicted RBP eCLIP23.3■■□□□ 1.32
CHRD-205ENST00000448472 BAZ1AQ9NRL2 1556 aaPredicted RBP23.3■■□□□ 1.32
CHRD-205ENST00000448472 ITGAEP38570 1179 aa23.18■■□□□ 1.3
CHRD-205ENST00000448472 GOLGA3Q08378 1498 aa23.18■■□□□ 1.3
CHRD-205ENST00000448472 CLIP1P30622 1438 aa23.13■■□□□ 1.29
CHRD-205ENST00000448472 EEA1Q15075 1411 aa23.12■■□□□ 1.29
CHRD-205ENST00000448472 TOP2AP11388 1531 aaKnown RBP23.11■■□□□ 1.29
CHRD-205ENST00000448472 SMARCA2P51531 1590 aa23.03■■□□□ 1.28
CHRD-205ENST00000448472 EIF4G1Q04637 1599 aaKnown RBP23.01■■□□□ 1.27
CHRD-205ENST00000448472 SMARCA4P51532 1647 aa22.97■■□□□ 1.27
CHRD-205ENST00000448472 CEP164Q9UPV0 1460 aa22.96■■□□□ 1.27
CHRD-205ENST00000448472 BCANQ96GW7 911 aa22.92■■□□□ 1.26
CHRD-205ENST00000448472 VPS8Q8N3P4 1428 aa22.9■■□□□ 1.26
CHRD-205ENST00000448472 SUPT16HQ9Y5B9 1047 aaKnown RBP22.87■■□□□ 1.25
CHRD-205ENST00000448472 RAPGEF2Q9Y4G8 1499 aa22.82■■□□□ 1.24
CHRD-205ENST00000448472 ATP1B4Q9UN42 357 aaPredicted RBP22.82■■□□□ 1.24
CHRD-205ENST00000448472 KANK4Q5T7N3 995 aaPredicted RBP22.81■■□□□ 1.24
CHRD-205ENST00000448472 DHX57Q6P158 1386 aaKnown RBP22.72■■□□□ 1.23
CHRD-205ENST00000448472 KCNH8Q96L42 1107 aa22.71■■□□□ 1.23
CHRD-205ENST00000448472 SYNJ1O43426 1573 aa22.69■■□□□ 1.22
CHRD-205ENST00000448472 DDX10Q13206 875 aaKnown RBP22.68■■□□□ 1.22
CHRD-205ENST00000448472 HIRIP3Q9BW71 556 aaPredicted RBP22.65■■□□□ 1.22
CHRD-205ENST00000448472 FAM50AQ14320 339 aaKnown RBP22.65■■□□□ 1.22
CHRD-205ENST00000448472 FKBP8Q14318 412 aa22.64■■□□□ 1.21
CHRD-205ENST00000448472 CLSPNQ9HAW4 1339 aa22.63■■□□□ 1.21
CHRD-205ENST00000448472 NEFLP07196 543 aa22.62■■□□□ 1.21
CHRD-205ENST00000448472 KIF21BO75037 1637 aa22.61■■□□□ 1.21
CHRD-205ENST00000448472 TSHZ2Q9NRE2 1034 aa22.6■■□□□ 1.21
CHRD-205ENST00000448472 BAZ1BQ9UIG0 1483 aaKnown RBP22.58■■□□□ 1.2
CHRD-205ENST00000448472 P3H3Q8IVL6 736 aa22.54■■□□□ 1.2
CHRD-205ENST00000448472 TRIM52Q96A61 297 aa22.54■■□□□ 1.2
CHRD-205ENST00000448472 SIN3AQ96ST3 1273 aa22.53■■□□□ 1.2
CHRD-205ENST00000448472 CCNB3Q8WWL7 1395 aa22.5■■□□□ 1.19
CHRD-205ENST00000448472 ANP32EQ9BTT0 268 aa22.44■■□□□ 1.18
CHRD-205ENST00000448472 ATAD2BQ9ULI0 1458 aa22.44■■□□□ 1.18
CHRD-205ENST00000448472 UNC13AQ9UPW8 1703 aa22.41■■□□□ 1.18
CHRD-205ENST00000448472 RAB3GAP2Q9H2M9 1393 aa22.41■■□□□ 1.18
CHRD-205ENST00000448472 ANP32CO43423 234 aa22.4■■□□□ 1.18
CHRD-205ENST00000448472 ARAP1Q96P48 1450 aa22.38■■□□□ 1.17
CHRD-205ENST00000448472 KIF27Q86VH2 1401 aa22.34■■□□□ 1.17
CHRD-205ENST00000448472 IRX6P78412 446 aaPredicted RBP22.27■■□□□ 1.16
CHRD-205ENST00000448472 RRBP1Q9P2E9 1410 aaKnown RBP22.27■■□□□ 1.15
CHRD-205ENST00000448472 BICRAQ9NZM4 1560 aa22.26■■□□□ 1.15
CHRD-205ENST00000448472 PRXQ9BXM0 1461 aa22.25■■□□□ 1.15
CHRD-205ENST00000448472 ERICH6Q7L0X2 663 aa22.24■■□□□ 1.15
CHRD-205ENST00000448472 SETD5Q9C0A6 1442 aa22.22■■□□□ 1.15
CHRD-205ENST00000448472 RBM19Q9Y4C8 960 aaKnown RBP22.22■■□□□ 1.15
CHRD-205ENST00000448472 TOP2BQ02880 1626 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms