RNA–Protein interactions for RNA: ENST00000450923.5

CHRD-206, Transcript of chordin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHRD, Length 3,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-206ENST00000450923 NISCHQ9Y2I1 1504 aa30.9■■■□□ 2.54
CHRD-206ENST00000450923 DCAF8L2P0C7V8 631 aa27.32■■□□□ 1.96
CHRD-206ENST00000450923 SHROOM4Q9ULL8 1493 aa27.02■■□□□ 1.92
CHRD-206ENST00000450923 SUPT5HO00267 1087 aaKnown RBP26.34■■□□□ 1.81
CHRD-206ENST00000450923 CCDC180Q9P1Z9 1646 aa26.08■■□□□ 1.77
CHRD-206ENST00000450923 ZCCHC6Q5VYS8 1495 aaKnown RBP25.89■■□□□ 1.73
CHRD-206ENST00000450923 ABCC9O60706 1549 aa25.71■■□□□ 1.71
CHRD-206ENST00000450923 SCRIBQ14160 1630 aa25.09■■□□□ 1.61
CHRD-206ENST00000450923 DCAF1Q9Y4B6 1507 aa24.89■■□□□ 1.58
CHRD-206ENST00000450923 PABPN1Q86U42 306 aaKnown RBP eCLIP24.8■■□□□ 1.562e-8■■■■□ 25.2
CHRD-206ENST00000450923 CHIC1Q5VXU3 224 aa24.74■■□□□ 1.55
CHRD-206ENST00000450923 EHMT2Q96KQ7 1210 aa24.72■■□□□ 1.55
CHRD-206ENST00000450923 FAM9AQ8IZU1 332 aaPredicted RBP24.54■■□□□ 1.52
CHRD-206ENST00000450923 NACADO15069 1562 aa24.53■■□□□ 1.52
CHRD-206ENST00000450923 CECR2Q9BXF3 1484 aa24.44■■□□□ 1.5
CHRD-206ENST00000450923 RB1CC1Q8TDY2 1594 aa24.41■■□□□ 1.5
CHRD-206ENST00000450923 RSF1Q96T23 1441 aaPredicted RBP24.41■■□□□ 1.5
CHRD-206ENST00000450923 LOC105371045A0A1W2PR82 267 aa24.37■■□□□ 1.49
CHRD-206ENST00000450923 TRIM41Q8WV44 630 aa24.34■■□□□ 1.49
CHRD-206ENST00000450923 MYO15BQ96JP2 1530 aa24.3■■□□□ 1.48
CHRD-206ENST00000450923 MROH2BQ7Z745 1585 aa24.15■■□□□ 1.46
CHRD-206ENST00000450923 WIZO95785 1651 aa23.96■■□□□ 1.43
CHRD-206ENST00000450923 PCGF6Q9BYE7 350 aa23.88■■□□□ 1.41
CHRD-206ENST00000450923 BAZ1AQ9NRL2 1556 aaPredicted RBP23.79■■□□□ 1.4
CHRD-206ENST00000450923 UNC13AQ9UPW8 1703 aa23.72■■□□□ 1.39
CHRD-206ENST00000450923 PPARGC1BQ86YN6 1023 aaKnown RBP23.72■■□□□ 1.39
CHRD-206ENST00000450923 TTBK1Q5TCY1 1321 aaPredicted RBP23.68■■□□□ 1.38
CHRD-206ENST00000450923 RANGAP1P46060 587 aaPredicted RBP23.63■■□□□ 1.37
CHRD-206ENST00000450923 SMARCA4P51532 1647 aa23.59■■□□□ 1.37
CHRD-206ENST00000450923 BICRAQ9NZM4 1560 aa23.58■■□□□ 1.37
CHRD-206ENST00000450923 CCDC88BA6NC98 1476 aa23.53■■□□□ 1.36
CHRD-206ENST00000450923 UBTFP17480 764 aaKnown RBP23.47■■□□□ 1.35
CHRD-206ENST00000450923 ABCC8Q09428 1581 aa23.45■■□□□ 1.34
CHRD-206ENST00000450923 TOP2AP11388 1531 aaKnown RBP23.38■■□□□ 1.33
CHRD-206ENST00000450923 BAZ1BQ9UIG0 1483 aaKnown RBP23.38■■□□□ 1.33
CHRD-206ENST00000450923 ATAD2BQ9ULI0 1458 aa23.3■■□□□ 1.32
CHRD-206ENST00000450923 SMARCA2P51531 1590 aa23.27■■□□□ 1.32
CHRD-206ENST00000450923 SOGA1O94964 1423 aa23.19■■□□□ 1.3
CHRD-206ENST00000450923 CSRNP3Q8WYN3 585 aa23.15■■□□□ 1.3
CHRD-206ENST00000450923 TRIM26Q12899 539 aaPredicted RBP23.14■■□□□ 1.3
CHRD-206ENST00000450923 WRNQ14191 1432 aaPredicted RBP eCLIP23.11■■□□□ 1.29
CHRD-206ENST00000450923 HRCP23327 699 aa23.1■■□□□ 1.29
CHRD-206ENST00000450923 RUSC2Q8N2Y8 1516 aa23.07■■□□□ 1.28
CHRD-206ENST00000450923 EIF4G1Q04637 1599 aaKnown RBP23.06■■□□□ 1.28
CHRD-206ENST00000450923 DNAJC5BQ9UF47 199 aa22.89■■□□□ 1.25
CHRD-206ENST00000450923 APLP2Q06481 763 aa22.84■■□□□ 1.25
CHRD-206ENST00000450923 NCAPD3P42695 1498 aa22.81■■□□□ 1.24
CHRD-206ENST00000450923 PEG3Q9GZU2 1588 aa22.81■■□□□ 1.24
CHRD-206ENST00000450923 ATP1B4Q9UN42 357 aaPredicted RBP22.77■■□□□ 1.24
CHRD-206ENST00000450923 SYNJ1O43426 1573 aa22.76■■□□□ 1.23
CHRD-206ENST00000450923 CEP162Q5TB80 1403 aa22.75■■□□□ 1.23
CHRD-206ENST00000450923 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.73■■□□□ 1.23
CHRD-206ENST00000450923 CC2D2AQ9P2K1 1620 aa22.7■■□□□ 1.22
CHRD-206ENST00000450923 CCER1Q8TC90 406 aaPredicted RBP22.66■■□□□ 1.22
CHRD-206ENST00000450923 HNRNPUL2Q1KMD3 747 aaKnown RBP22.65■■□□□ 1.22
CHRD-206ENST00000450923 P3H3Q8IVL6 736 aa22.64■■□□□ 1.21
CHRD-206ENST00000450923 CADPSQ9ULU8 1353 aa22.62■■□□□ 1.21
CHRD-206ENST00000450923 GOLGA3Q08378 1498 aa22.61■■□□□ 1.21
CHRD-206ENST00000450923 TNIKQ9UKE5 1360 aa22.59■■□□□ 1.21
CHRD-206ENST00000450923 EEA1Q15075 1411 aa22.59■■□□□ 1.21
CHRD-206ENST00000450923 HMGXB3Q12766 1538 aa22.58■■□□□ 1.2
CHRD-206ENST00000450923 NESP48681 1621 aa22.57■■□□□ 1.2
CHRD-206ENST00000450923 RAPGEF2Q9Y4G8 1499 aa22.56■■□□□ 1.2
CHRD-206ENST00000450923 CLIP1P30622 1438 aa22.54■■□□□ 1.2
CHRD-206ENST00000450923 CFTRP13569 1480 aa22.52■■□□□ 1.19
CHRD-206ENST00000450923 CEP164Q9UPV0 1460 aa22.51■■□□□ 1.19
CHRD-206ENST00000450923 ITGAEP38570 1179 aa22.5■■□□□ 1.19
CHRD-206ENST00000450923 CUX2O14529 1486 aa22.47■■□□□ 1.19
CHRD-206ENST00000450923 KIF27Q86VH2 1401 aa22.46■■□□□ 1.19
CHRD-206ENST00000450923 CUX1P39880 1505 aa22.46■■□□□ 1.19
CHRD-206ENST00000450923 FANCD2Q9BXW9 1451 aa22.4■■□□□ 1.18
CHRD-206ENST00000450923 TOP2BQ02880 1626 aa22.37■■□□□ 1.17
CHRD-206ENST00000450923 RAD54L2Q9Y4B4 1467 aa22.33■■□□□ 1.17
CHRD-206ENST00000450923 TDRD9Q8NDG6 1382 aaKnown RBP22.32■■□□□ 1.16
CHRD-206ENST00000450923 FGD5Q6ZNL6 1462 aa22.32■■□□□ 1.16
CHRD-206ENST00000450923 ARID3CA6NKF2 412 aa22.3■■□□□ 1.16
CHRD-206ENST00000450923 ZEB1P37275 1124 aaPredicted RBP22.27■■□□□ 1.16
CHRD-206ENST00000450923 CARMIL1Q5VZK9 1371 aa22.27■■□□□ 1.16
CHRD-206ENST00000450923 FBLN2P98095 1184 aa22.25■■□□□ 1.15
CHRD-206ENST00000450923 KANK4Q5T7N3 995 aaPredicted RBP22.22■■□□□ 1.15
CHRD-206ENST00000450923 IGF1RP08069 1367 aa22.22■■□□□ 1.15
CHRD-206ENST00000450923 VPS8Q8N3P4 1428 aa22.16■■□□□ 1.14
CHRD-206ENST00000450923 PDS5BQ9NTI5 1447 aa22.13■■□□□ 1.13
CHRD-206ENST00000450923 KIF21BO75037 1637 aa22.12■■□□□ 1.13
CHRD-206ENST00000450923 BIVM-ERCC5R4GMW8 1640 aa22.12■■□□□ 1.13
CHRD-206ENST00000450923 FAM50AQ14320 339 aaKnown RBP22.11■■□□□ 1.13
CHRD-206ENST00000450923 PRXQ9BXM0 1461 aa22.1■■□□□ 1.13
CHRD-206ENST00000450923 POLA1P09884 1462 aaPredicted RBP22.08■■□□□ 1.12
CHRD-206ENST00000450923 TOPBP1Q92547 1522 aa22.07■■□□□ 1.12
CHRD-206ENST00000450923 ARAP1Q96P48 1450 aa22.01■■□□□ 1.11
CHRD-206ENST00000450923 ERCC6Q03468 1493 aa22.01■■□□□ 1.11
CHRD-206ENST00000450923 URB2Q14146 1524 aaKnown RBP21.97■■□□□ 1.11
CHRD-206ENST00000450923 FHOD3Q2V2M9 1422 aa21.95■■□□□ 1.1
CHRD-206ENST00000450923 AQRO60306 1485 aaKnown RBP eCLIP21.94■■□□□ 1.15e-7■■■■□ 20.7
CHRD-206ENST00000450923 DNMBPQ6XZF7 1577 aa21.91■■□□□ 1.1
CHRD-206ENST00000450923 ARHGAP35Q9NRY4 1499 aa21.91■■□□□ 1.1
CHRD-206ENST00000450923 ERICH3Q5RHP9 1530 aa21.89■■□□□ 1.1
CHRD-206ENST00000450923 GAPVD1Q14C86 1478 aa21.87■■□□□ 1.09
CHRD-206ENST00000450923 LAMC3Q9Y6N6 1575 aa21.87■■□□□ 1.09
CHRD-206ENST00000450923 CHMP7Q8WUX9 453 aaPredicted RBP21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms