RNA–Protein interactions for RNA: ENST00000403707.7

TRMT2A-202, Transcript of tRNA methyltransferase 2 homolog A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRMT2A, Length 2,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT2A-202ENST00000403707 NISCHQ9Y2I1 1504 aa32.33■■■□□ 2.77
TRMT2A-202ENST00000403707 SHROOM4Q9ULL8 1493 aa27.87■■■□□ 2.05
TRMT2A-202ENST00000403707 SUPT5HO00267 1087 aaKnown RBP27.54■■■□□ 2
TRMT2A-202ENST00000403707 ZCCHC6Q5VYS8 1495 aaKnown RBP27.42■■□□□ 1.98
TRMT2A-202ENST00000403707 CCDC180Q9P1Z9 1646 aa27.25■■□□□ 1.95
TRMT2A-202ENST00000403707 CHIC1Q5VXU3 224 aa27■■□□□ 1.91
TRMT2A-202ENST00000403707 MYO15BQ96JP2 1530 aa26.98■■□□□ 1.91
TRMT2A-202ENST00000403707 HRCP23327 699 aa26.84■■□□□ 1.89
TRMT2A-202ENST00000403707 DCAF8L2P0C7V8 631 aa26.72■■□□□ 1.87
TRMT2A-202ENST00000403707 PCGF6Q9BYE7 350 aa26.55■■□□□ 1.84
TRMT2A-202ENST00000403707 DCAF1Q9Y4B6 1507 aa26.5■■□□□ 1.83
TRMT2A-202ENST00000403707 LOC105371045A0A1W2PR82 267 aa26.24■■□□□ 1.79
TRMT2A-202ENST00000403707 PPARGC1BQ86YN6 1023 aaKnown RBP26.22■■□□□ 1.79
TRMT2A-202ENST00000403707 TRIM26Q12899 539 aaPredicted RBP25.95■■□□□ 1.74
TRMT2A-202ENST00000403707 ABCC9O60706 1549 aa25.91■■□□□ 1.74
TRMT2A-202ENST00000403707 RSF1Q96T23 1441 aaPredicted RBP25.77■■□□□ 1.72
TRMT2A-202ENST00000403707 TRIM41Q8WV44 630 aa25.61■■□□□ 1.69
TRMT2A-202ENST00000403707 SCRIBQ14160 1630 aa25.61■■□□□ 1.69
TRMT2A-202ENST00000403707 ZEB1P37275 1124 aaPredicted RBP25.53■■□□□ 1.68
TRMT2A-202ENST00000403707 RB1CC1Q8TDY2 1594 aa25.51■■□□□ 1.67
TRMT2A-202ENST00000403707 FAM9AQ8IZU1 332 aaPredicted RBP25.42■■□□□ 1.66
TRMT2A-202ENST00000403707 NACADO15069 1562 aa25.33■■□□□ 1.65
TRMT2A-202ENST00000403707 CECR2Q9BXF3 1484 aa25.23■■□□□ 1.63
TRMT2A-202ENST00000403707 EHMT2Q96KQ7 1210 aa25.19■■□□□ 1.62
TRMT2A-202ENST00000403707 MROH2BQ7Z745 1585 aa25.17■■□□□ 1.62
TRMT2A-202ENST00000403707 WIZO95785 1651 aa25.02■■□□□ 1.6
TRMT2A-202ENST00000403707 SCAF1Q9H7N4 1312 aaKnown RBP24.99■■□□□ 1.59
TRMT2A-202ENST00000403707 PELP1Q8IZL8 1130 aaKnown RBP24.89■■□□□ 1.57
TRMT2A-202ENST00000403707 BAZ1AQ9NRL2 1556 aaPredicted RBP24.88■■□□□ 1.57
TRMT2A-202ENST00000403707 EIF4G1Q04637 1599 aaKnown RBP24.87■■□□□ 1.57
TRMT2A-202ENST00000403707 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.84■■□□□ 1.57
TRMT2A-202ENST00000403707 UNC13AQ9UPW8 1703 aa24.79■■□□□ 1.56
TRMT2A-202ENST00000403707 CCER1Q8TC90 406 aaPredicted RBP24.77■■□□□ 1.56
TRMT2A-202ENST00000403707 WRNQ14191 1432 aaPredicted RBP eCLIP24.66■■□□□ 1.542e-9■■■■■ 83.6
TRMT2A-202ENST00000403707 CCDC88BA6NC98 1476 aa24.64■■□□□ 1.54
TRMT2A-202ENST00000403707 ABCC8Q09428 1581 aa24.62■■□□□ 1.53
TRMT2A-202ENST00000403707 TOP2AP11388 1531 aaKnown RBP24.62■■□□□ 1.53
TRMT2A-202ENST00000403707 ACIN1Q9UKV3 1341 aaKnown RBP24.6■■□□□ 1.53
TRMT2A-202ENST00000403707 CEP162Q5TB80 1403 aa24.56■■□□□ 1.52
TRMT2A-202ENST00000403707 NEUROD1Q13562 356 aa24.55■■□□□ 1.52
TRMT2A-202ENST00000403707 DIEXFQ68CQ4 756 aaKnown RBP24.53■■□□□ 1.52
TRMT2A-202ENST00000403707 SMARCA2P51531 1590 aa24.52■■□□□ 1.52
TRMT2A-202ENST00000403707 TNIKQ9UKE5 1360 aa24.51■■□□□ 1.51
TRMT2A-202ENST00000403707 SOGA1O94964 1423 aa24.51■■□□□ 1.51
TRMT2A-202ENST00000403707 SMARCA4P51532 1647 aa24.51■■□□□ 1.51
TRMT2A-202ENST00000403707 PABPN1Q86U42 306 aaKnown RBP eCLIP24.49■■□□□ 1.517e-7■■■■□ 25.6
TRMT2A-202ENST00000403707 TTBK1Q5TCY1 1321 aaPredicted RBP24.48■■□□□ 1.51
TRMT2A-202ENST00000403707 BICRAQ9NZM4 1560 aa24.44■■□□□ 1.5
TRMT2A-202ENST00000403707 CSRNP3Q8WYN3 585 aa24.41■■□□□ 1.5
TRMT2A-202ENST00000403707 EEA1Q15075 1411 aa24.4■■□□□ 1.5
TRMT2A-202ENST00000403707 RUSC2Q8N2Y8 1516 aa24.38■■□□□ 1.49
TRMT2A-202ENST00000403707 CENPBP07199 599 aaPredicted RBP24.35■■□□□ 1.49
TRMT2A-202ENST00000403707 UBTFP17480 764 aaKnown RBP24.33■■□□□ 1.49
TRMT2A-202ENST00000403707 GTF3C3Q9Y5Q9 886 aa24.32■■□□□ 1.48
TRMT2A-202ENST00000403707 GOLGA3Q08378 1498 aa24.26■■□□□ 1.47
TRMT2A-202ENST00000403707 ZNF316A6NFI3 1004 aaPredicted RBP24.25■■□□□ 1.47
TRMT2A-202ENST00000403707 CEP164Q9UPV0 1460 aa24.08■■□□□ 1.45
TRMT2A-202ENST00000403707 HNRNPUL2Q1KMD3 747 aaKnown RBP24.04■■□□□ 1.44
TRMT2A-202ENST00000403707 KIF21BO75037 1637 aa24.04■■□□□ 1.44
TRMT2A-202ENST00000403707 PEG3Q9GZU2 1588 aa24.03■■□□□ 1.44
TRMT2A-202ENST00000403707 SYNJ1O43426 1573 aa24.02■■□□□ 1.44
TRMT2A-202ENST00000403707 CLIP1P30622 1438 aa24.02■■□□□ 1.44
TRMT2A-202ENST00000403707 MIER1Q8N108 512 aa23.97■■□□□ 1.43
TRMT2A-202ENST00000403707 VPS8Q8N3P4 1428 aa23.97■■□□□ 1.43
TRMT2A-202ENST00000403707 YTHDC1Q96MU7 727 aaKnown RBP23.94■■□□□ 1.42
TRMT2A-202ENST00000403707 BAZ1BQ9UIG0 1483 aaKnown RBP23.91■■□□□ 1.42
TRMT2A-202ENST00000403707 RAPGEF2Q9Y4G8 1499 aa23.88■■□□□ 1.41
TRMT2A-202ENST00000403707 APLP2Q06481 763 aa23.85■■□□□ 1.41
TRMT2A-202ENST00000403707 ATAD2BQ9ULI0 1458 aa23.82■■□□□ 1.4
TRMT2A-202ENST00000403707 RANGAP1P46060 587 aaPredicted RBP23.73■■□□□ 1.39
TRMT2A-202ENST00000403707 MYT1Q01538 1121 aa23.71■■□□□ 1.39
TRMT2A-202ENST00000403707 CLSPNQ9HAW4 1339 aa23.69■■□□□ 1.38
TRMT2A-202ENST00000403707 TOP2BQ02880 1626 aa23.68■■□□□ 1.38
TRMT2A-202ENST00000403707 DHX57Q6P158 1386 aaKnown RBP23.65■■□□□ 1.38
TRMT2A-202ENST00000403707 PRXQ9BXM0 1461 aa23.61■■□□□ 1.37
TRMT2A-202ENST00000403707 ARAP1Q96P48 1450 aa23.59■■□□□ 1.37
TRMT2A-202ENST00000403707 ERICH3Q5RHP9 1530 aa23.59■■□□□ 1.37
TRMT2A-202ENST00000403707 KANK4Q5T7N3 995 aaPredicted RBP23.57■■□□□ 1.36
TRMT2A-202ENST00000403707 BIVM-ERCC5R4GMW8 1640 aa23.56■■□□□ 1.36
TRMT2A-202ENST00000403707 RRBP1Q9P2E9 1410 aaKnown RBP23.49■■□□□ 1.35
TRMT2A-202ENST00000403707 CUX2O14529 1486 aa23.42■■□□□ 1.34
TRMT2A-202ENST00000403707 NCAPD3P42695 1498 aa23.4■■□□□ 1.34
TRMT2A-202ENST00000403707 CUX1P39880 1505 aa23.39■■□□□ 1.33
TRMT2A-202ENST00000403707 KIF27Q86VH2 1401 aa23.37■■□□□ 1.33
TRMT2A-202ENST00000403707 HMGXB3Q12766 1538 aa23.37■■□□□ 1.33
TRMT2A-202ENST00000403707 CCNB3Q8WWL7 1395 aa23.36■■□□□ 1.33
TRMT2A-202ENST00000403707 SUPT16HQ9Y5B9 1047 aaKnown RBP23.36■■□□□ 1.33
TRMT2A-202ENST00000403707 ARHGAP35Q9NRY4 1499 aa23.33■■□□□ 1.32
TRMT2A-202ENST00000403707 CC2D2AQ9P2K1 1620 aa23.31■■□□□ 1.32
TRMT2A-202ENST00000403707 ITGAEP38570 1179 aa23.23■■□□□ 1.31
TRMT2A-202ENST00000403707 CFTRP13569 1480 aa23.22■■□□□ 1.31
TRMT2A-202ENST00000403707 RAB3GAP2Q9H2M9 1393 aa23.21■■□□□ 1.31
TRMT2A-202ENST00000403707 MAPKBP1O60336 1514 aa23.18■■□□□ 1.3
TRMT2A-202ENST00000403707 IGF1RP08069 1367 aa23.14■■□□□ 1.3
TRMT2A-202ENST00000403707 KCNH8Q96L42 1107 aa23.14■■□□□ 1.29
TRMT2A-202ENST00000403707 MAP3K1Q13233 1512 aa23.13■■□□□ 1.29
TRMT2A-202ENST00000403707 TIAM1Q13009 1591 aa23.11■■□□□ 1.29
TRMT2A-202ENST00000403707 SETD5Q9C0A6 1442 aa23.09■■□□□ 1.29
TRMT2A-202ENST00000403707 TSHZ2Q9NRE2 1034 aa23.08■■□□□ 1.28
TRMT2A-202ENST00000403707 LRRC9Q6ZRR7 1453 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms