RNA–Protein interactions for RNA: ENST00000301453.7

OTUB1-201, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 2

Gene OTUB1, Length 2,493 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-201ENST00000301453 NISCHQ9Y2I1 1504 aa33.59■■■□□ 2.97
OTUB1-201ENST00000301453 SHROOM4Q9ULL8 1493 aa28.77■■■□□ 2.2
OTUB1-201ENST00000301453 ZCCHC6Q5VYS8 1495 aaKnown RBP28.44■■■□□ 2.14
OTUB1-201ENST00000301453 CCDC180Q9P1Z9 1646 aa28.42■■■□□ 2.14
OTUB1-201ENST00000301453 SUPT5HO00267 1087 aaKnown RBP28.27■■■□□ 2.12
OTUB1-201ENST00000301453 DCAF8L2P0C7V8 631 aa27.79■■■□□ 2.04
OTUB1-201ENST00000301453 CHIC1Q5VXU3 224 aa27.59■■■□□ 2.01
OTUB1-201ENST00000301453 MYO15BQ96JP2 1530 aa27.56■■■□□ 2
OTUB1-201ENST00000301453 DCAF1Q9Y4B6 1507 aa27.52■■■□□ 2
OTUB1-201ENST00000301453 HRCP23327 699 aa26.96■■□□□ 1.91
OTUB1-201ENST00000301453 PCGF6Q9BYE7 350 aa26.85■■□□□ 1.89
OTUB1-201ENST00000301453 ABCC9O60706 1549 aa26.84■■□□□ 1.89
OTUB1-201ENST00000301453 LOC105371045A0A1W2PR82 267 aa26.81■■□□□ 1.88
OTUB1-201ENST00000301453 SCRIBQ14160 1630 aa26.72■■□□□ 1.87
OTUB1-201ENST00000301453 RSF1Q96T23 1441 aaPredicted RBP26.66■■□□□ 1.86
OTUB1-201ENST00000301453 PPARGC1BQ86YN6 1023 aaKnown RBP26.44■■□□□ 1.82
OTUB1-201ENST00000301453 RB1CC1Q8TDY2 1594 aa26.4■■□□□ 1.82
OTUB1-201ENST00000301453 TRIM41Q8WV44 630 aa26.28■■□□□ 1.8
OTUB1-201ENST00000301453 TRIM26Q12899 539 aaPredicted RBP26.28■■□□□ 1.8
OTUB1-201ENST00000301453 NACADO15069 1562 aa26.25■■□□□ 1.79
OTUB1-201ENST00000301453 CECR2Q9BXF3 1484 aa26.25■■□□□ 1.79
OTUB1-201ENST00000301453 MROH2BQ7Z745 1585 aa26.16■■□□□ 1.78
OTUB1-201ENST00000301453 FAM9AQ8IZU1 332 aaPredicted RBP26.12■■□□□ 1.77
OTUB1-201ENST00000301453 WIZO95785 1651 aa26.01■■□□□ 1.75
OTUB1-201ENST00000301453 EHMT2Q96KQ7 1210 aa25.91■■□□□ 1.74
OTUB1-201ENST00000301453 BAZ1AQ9NRL2 1556 aaPredicted RBP25.82■■□□□ 1.72
OTUB1-201ENST00000301453 EIF4G1Q04637 1599 aaKnown RBP25.74■■□□□ 1.71
OTUB1-201ENST00000301453 ZEB1P37275 1124 aaPredicted RBP25.69■■□□□ 1.7
OTUB1-201ENST00000301453 TOP2AP11388 1531 aaKnown RBP25.56■■□□□ 1.68
OTUB1-201ENST00000301453 SMARCA4P51532 1647 aa25.54■■□□□ 1.68
OTUB1-201ENST00000301453 CCDC88BA6NC98 1476 aa25.5■■□□□ 1.67
OTUB1-201ENST00000301453 ABCC8Q09428 1581 aa25.49■■□□□ 1.67
OTUB1-201ENST00000301453 UNC13AQ9UPW8 1703 aa25.48■■□□□ 1.67
OTUB1-201ENST00000301453 SMARCA2P51531 1590 aa25.46■■□□□ 1.67
OTUB1-201ENST00000301453 SOGA1O94964 1423 aa25.3■■□□□ 1.64
OTUB1-201ENST00000301453 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.25■■□□□ 1.63
OTUB1-201ENST00000301453 WRNQ14191 1432 aaPredicted RBP eCLIP25.21■■□□□ 1.63
OTUB1-201ENST00000301453 CEP162Q5TB80 1403 aa25.2■■□□□ 1.62
OTUB1-201ENST00000301453 RUSC2Q8N2Y8 1516 aa25.19■■□□□ 1.62
OTUB1-201ENST00000301453 PABPN1Q86U42 306 aaKnown RBP eCLIP25.19■■□□□ 1.628e-7■■■■□ 25.6
OTUB1-201ENST00000301453 BICRAQ9NZM4 1560 aa25.18■■□□□ 1.62
OTUB1-201ENST00000301453 TNIKQ9UKE5 1360 aa25.15■■□□□ 1.62
OTUB1-201ENST00000301453 CCER1Q8TC90 406 aaPredicted RBP25.12■■□□□ 1.61
OTUB1-201ENST00000301453 CSRNP3Q8WYN3 585 aa25.12■■□□□ 1.61
OTUB1-201ENST00000301453 TTBK1Q5TCY1 1321 aaPredicted RBP25.1■■□□□ 1.61
OTUB1-201ENST00000301453 EEA1Q15075 1411 aa25.08■■□□□ 1.61
OTUB1-201ENST00000301453 PEG3Q9GZU2 1588 aa25.04■■□□□ 1.6
OTUB1-201ENST00000301453 UBTFP17480 764 aaKnown RBP25.01■■□□□ 1.59
OTUB1-201ENST00000301453 SCAF1Q9H7N4 1312 aaKnown RBP24.95■■□□□ 1.59
OTUB1-201ENST00000301453 GOLGA3Q08378 1498 aa24.95■■□□□ 1.58
OTUB1-201ENST00000301453 PELP1Q8IZL8 1130 aaKnown RBP24.93■■□□□ 1.58
OTUB1-201ENST00000301453 SYNJ1O43426 1573 aa24.91■■□□□ 1.58
OTUB1-201ENST00000301453 ATAD2BQ9ULI0 1458 aa24.86■■□□□ 1.57
OTUB1-201ENST00000301453 CEP164Q9UPV0 1460 aa24.79■■□□□ 1.56
OTUB1-201ENST00000301453 KIF21BO75037 1637 aa24.77■■□□□ 1.56
OTUB1-201ENST00000301453 BAZ1BQ9UIG0 1483 aaKnown RBP24.76■■□□□ 1.55
OTUB1-201ENST00000301453 DIEXFQ68CQ4 756 aaKnown RBP24.73■■□□□ 1.55
OTUB1-201ENST00000301453 CLIP1P30622 1438 aa24.69■■□□□ 1.54
OTUB1-201ENST00000301453 RAPGEF2Q9Y4G8 1499 aa24.65■■□□□ 1.54
OTUB1-201ENST00000301453 ACIN1Q9UKV3 1341 aaKnown RBP24.63■■□□□ 1.53
OTUB1-201ENST00000301453 NEUROD1Q13562 356 aa24.63■■□□□ 1.53
OTUB1-201ENST00000301453 VPS8Q8N3P4 1428 aa24.6■■□□□ 1.53
OTUB1-201ENST00000301453 HNRNPUL2Q1KMD3 747 aaKnown RBP24.57■■□□□ 1.52
OTUB1-201ENST00000301453 TOP2BQ02880 1626 aa24.56■■□□□ 1.52
OTUB1-201ENST00000301453 ZNF316A6NFI3 1004 aaPredicted RBP24.52■■□□□ 1.52
OTUB1-201ENST00000301453 RANGAP1P46060 587 aaPredicted RBP24.51■■□□□ 1.51
OTUB1-201ENST00000301453 BIVM-ERCC5R4GMW8 1640 aa24.46■■□□□ 1.51
OTUB1-201ENST00000301453 APLP2Q06481 763 aa24.41■■□□□ 1.5
OTUB1-201ENST00000301453 PRXQ9BXM0 1461 aa24.38■■□□□ 1.49
OTUB1-201ENST00000301453 CENPBP07199 599 aaPredicted RBP24.37■■□□□ 1.49
OTUB1-201ENST00000301453 GTF3C3Q9Y5Q9 886 aa24.36■■□□□ 1.49
OTUB1-201ENST00000301453 ERICH3Q5RHP9 1530 aa24.34■■□□□ 1.49
OTUB1-201ENST00000301453 NCAPD3P42695 1498 aa24.34■■□□□ 1.49
OTUB1-201ENST00000301453 CUX1P39880 1505 aa24.32■■□□□ 1.48
OTUB1-201ENST00000301453 ARAP1Q96P48 1450 aa24.32■■□□□ 1.48
OTUB1-201ENST00000301453 HMGXB3Q12766 1538 aa24.31■■□□□ 1.48
OTUB1-201ENST00000301453 KANK4Q5T7N3 995 aaPredicted RBP24.24■■□□□ 1.47
OTUB1-201ENST00000301453 MIER1Q8N108 512 aa24.23■■□□□ 1.47
OTUB1-201ENST00000301453 CFTRP13569 1480 aa24.19■■□□□ 1.46
OTUB1-201ENST00000301453 KIF27Q86VH2 1401 aa24.19■■□□□ 1.46
OTUB1-201ENST00000301453 YTHDC1Q96MU7 727 aaKnown RBP24.16■■□□□ 1.46
OTUB1-201ENST00000301453 DHX57Q6P158 1386 aaKnown RBP24.14■■□□□ 1.45
OTUB1-201ENST00000301453 ARHGAP35Q9NRY4 1499 aa24.08■■□□□ 1.45
OTUB1-201ENST00000301453 RRBP1Q9P2E9 1410 aaKnown RBP24.07■■□□□ 1.44
OTUB1-201ENST00000301453 CLSPNQ9HAW4 1339 aa24.06■■□□□ 1.44
OTUB1-201ENST00000301453 IGF1RP08069 1367 aa23.98■■□□□ 1.43
OTUB1-201ENST00000301453 CUX2O14529 1486 aa23.95■■□□□ 1.42
OTUB1-201ENST00000301453 PRDM2Q13029 1718 aa23.95■■□□□ 1.42
OTUB1-201ENST00000301453 CCNB3Q8WWL7 1395 aa23.94■■□□□ 1.42
OTUB1-201ENST00000301453 CADPSQ9ULU8 1353 aa23.88■■□□□ 1.41
OTUB1-201ENST00000301453 ITGAEP38570 1179 aa23.86■■□□□ 1.41
OTUB1-201ENST00000301453 CARMIL1Q5VZK9 1371 aa23.85■■□□□ 1.41
OTUB1-201ENST00000301453 FGD5Q6ZNL6 1462 aa23.85■■□□□ 1.41
OTUB1-201ENST00000301453 MYT1Q01538 1121 aa23.84■■□□□ 1.41
OTUB1-201ENST00000301453 TIAM1Q13009 1591 aa23.82■■□□□ 1.4
OTUB1-201ENST00000301453 MAP3K1Q13233 1512 aa23.78■■□□□ 1.4
OTUB1-201ENST00000301453 RAB3GAP2Q9H2M9 1393 aa23.76■■□□□ 1.39
OTUB1-201ENST00000301453 LRRC9Q6ZRR7 1453 aa23.73■■□□□ 1.39
OTUB1-201ENST00000301453 MAPKBP1O60336 1514 aa23.72■■□□□ 1.39
OTUB1-201ENST00000301453 PHLDB1Q86UU1 1377 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms