RNA–Protein interactions for RNA: ENST00000479475.1

MAMDC4-203, Transcript of MAM domain containing 4, humanhuman

TSL 1 (best)

Gene MAMDC4, Length 2,603 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAMDC4-203ENST00000479475 NISCHQ9Y2I1 1504 aa40.32■■■■■ 4.05
MAMDC4-203ENST00000479475 CCDC180Q9P1Z9 1646 aa34.39■■■■□ 3.1
MAMDC4-203ENST00000479475 SHROOM4Q9ULL8 1493 aa34.16■■■■□ 3.06
MAMDC4-203ENST00000479475 ZCCHC6Q5VYS8 1495 aaKnown RBP34.03■■■■□ 3.04
MAMDC4-203ENST00000479475 DCAF8L2P0C7V8 631 aa33.61■■■□□ 2.97
MAMDC4-203ENST00000479475 SUPT5HO00267 1087 aaKnown RBP33.32■■■□□ 2.92
MAMDC4-203ENST00000479475 DCAF1Q9Y4B6 1507 aa33.05■■■□□ 2.88
MAMDC4-203ENST00000479475 ABCC9O60706 1549 aa32.3■■■□□ 2.76
MAMDC4-203ENST00000479475 SCRIBQ14160 1630 aa32.24■■■□□ 2.75
MAMDC4-203ENST00000479475 MYO15BQ96JP2 1530 aa32.24■■■□□ 2.75
MAMDC4-203ENST00000479475 CHIC1Q5VXU3 224 aa32.19■■■□□ 2.74
MAMDC4-203ENST00000479475 NACADO15069 1562 aa31.92■■■□□ 2.7
MAMDC4-203ENST00000479475 RSF1Q96T23 1441 aaPredicted RBP31.79■■■□□ 2.68
MAMDC4-203ENST00000479475 CECR2Q9BXF3 1484 aa31.53■■■□□ 2.64
MAMDC4-203ENST00000479475 RB1CC1Q8TDY2 1594 aa31.48■■■□□ 2.63
MAMDC4-203ENST00000479475 MROH2BQ7Z745 1585 aa31.36■■■□□ 2.61
MAMDC4-203ENST00000479475 LOC105371045A0A1W2PR82 267 aa31.26■■■□□ 2.59
MAMDC4-203ENST00000479475 WIZO95785 1651 aa31.14■■■□□ 2.58
MAMDC4-203ENST00000479475 TRIM41Q8WV44 630 aa31.03■■■□□ 2.56
MAMDC4-203ENST00000479475 UNC13AQ9UPW8 1703 aa30.99■■■□□ 2.55
MAMDC4-203ENST00000479475 BAZ1AQ9NRL2 1556 aaPredicted RBP30.98■■■□□ 2.55
MAMDC4-203ENST00000479475 PABPN1Q86U42 306 aaKnown RBP eCLIP30.85■■■□□ 2.538e-7■■■■□ 25.4
MAMDC4-203ENST00000479475 FAM9AQ8IZU1 332 aaPredicted RBP30.81■■■□□ 2.52
MAMDC4-203ENST00000479475 PCGF6Q9BYE7 350 aa30.79■■■□□ 2.52
MAMDC4-203ENST00000479475 SMARCA4P51532 1647 aa30.77■■■□□ 2.52
MAMDC4-203ENST00000479475 BICRAQ9NZM4 1560 aa30.69■■■□□ 2.5
MAMDC4-203ENST00000479475 TOP2AP11388 1531 aaKnown RBP30.63■■■□□ 2.49
MAMDC4-203ENST00000479475 EHMT2Q96KQ7 1210 aa30.58■■■□□ 2.49
MAMDC4-203ENST00000479475 CCDC88BA6NC98 1476 aa30.54■■■□□ 2.48
MAMDC4-203ENST00000479475 EIF4G1Q04637 1599 aaKnown RBP30.54■■■□□ 2.48
MAMDC4-203ENST00000479475 HRCP23327 699 aa30.48■■■□□ 2.47
MAMDC4-203ENST00000479475 SMARCA2P51531 1590 aa30.47■■■□□ 2.47
MAMDC4-203ENST00000479475 ABCC8Q09428 1581 aa30.33■■■□□ 2.45
MAMDC4-203ENST00000479475 TRIM26Q12899 539 aaPredicted RBP30.26■■■□□ 2.43
MAMDC4-203ENST00000479475 PEG3Q9GZU2 1588 aa30.19■■■□□ 2.42
MAMDC4-203ENST00000479475 ATAD2BQ9ULI0 1458 aa30.11■■■□□ 2.41
MAMDC4-203ENST00000479475 SOGA1O94964 1423 aa30■■■□□ 2.39
MAMDC4-203ENST00000479475 BAZ1BQ9UIG0 1483 aaKnown RBP29.99■■■□□ 2.39
MAMDC4-203ENST00000479475 PPARGC1BQ86YN6 1023 aaKnown RBP29.99■■■□□ 2.39
MAMDC4-203ENST00000479475 RUSC2Q8N2Y8 1516 aa29.88■■■□□ 2.37
MAMDC4-203ENST00000479475 WRNQ14191 1432 aaPredicted RBP eCLIP29.86■■■□□ 2.37
MAMDC4-203ENST00000479475 CSRNP3Q8WYN3 585 aa29.77■■■□□ 2.36
MAMDC4-203ENST00000479475 SYNJ1O43426 1573 aa29.73■■■□□ 2.35
MAMDC4-203ENST00000479475 EEA1Q15075 1411 aa29.69■■■□□ 2.34
MAMDC4-203ENST00000479475 CEP162Q5TB80 1403 aa29.64■■■□□ 2.34
MAMDC4-203ENST00000479475 UBTFP17480 764 aaKnown RBP29.62■■■□□ 2.33
MAMDC4-203ENST00000479475 TNIKQ9UKE5 1360 aa29.61■■■□□ 2.33
MAMDC4-203ENST00000479475 NCAPD3P42695 1498 aa29.58■■■□□ 2.33
MAMDC4-203ENST00000479475 HMGXB3Q12766 1538 aa29.51■■■□□ 2.31
MAMDC4-203ENST00000479475 GOLGA3Q08378 1498 aa29.49■■■□□ 2.31
MAMDC4-203ENST00000479475 TTBK1Q5TCY1 1321 aaPredicted RBP29.48■■■□□ 2.31
MAMDC4-203ENST00000479475 CEP164Q9UPV0 1460 aa29.37■■■□□ 2.29
MAMDC4-203ENST00000479475 TOP2BQ02880 1626 aa29.36■■■□□ 2.29
MAMDC4-203ENST00000479475 ZEB1P37275 1124 aaPredicted RBP29.35■■■□□ 2.29
MAMDC4-203ENST00000479475 KIF21BO75037 1637 aa29.3■■■□□ 2.28
MAMDC4-203ENST00000479475 RAPGEF2Q9Y4G8 1499 aa29.27■■■□□ 2.28
MAMDC4-203ENST00000479475 CFTRP13569 1480 aa29.24■■■□□ 2.27
MAMDC4-203ENST00000479475 BIVM-ERCC5R4GMW8 1640 aa29.24■■■□□ 2.27
MAMDC4-203ENST00000479475 CUX1P39880 1505 aa29.21■■■□□ 2.27
MAMDC4-203ENST00000479475 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.2■■■□□ 2.26
MAMDC4-203ENST00000479475 RANGAP1P46060 587 aaPredicted RBP29.19■■■□□ 2.26
MAMDC4-203ENST00000479475 CLIP1P30622 1438 aa29.17■■■□□ 2.26
MAMDC4-203ENST00000479475 CCER1Q8TC90 406 aaPredicted RBP29.05■■■□□ 2.24
MAMDC4-203ENST00000479475 CC2D2AQ9P2K1 1620 aa29.04■■■□□ 2.24
MAMDC4-203ENST00000479475 PRXQ9BXM0 1461 aa29.01■■■□□ 2.23
MAMDC4-203ENST00000479475 CADPSQ9ULU8 1353 aa29.01■■■□□ 2.23
MAMDC4-203ENST00000479475 VPS8Q8N3P4 1428 aa28.98■■■□□ 2.23
MAMDC4-203ENST00000479475 KIF27Q86VH2 1401 aa28.96■■■□□ 2.23
MAMDC4-203ENST00000479475 ERICH3Q5RHP9 1530 aa28.91■■■□□ 2.22
MAMDC4-203ENST00000479475 PRDM2Q13029 1718 aa28.86■■■□□ 2.21
MAMDC4-203ENST00000479475 APLP2Q06481 763 aa28.83■■■□□ 2.21
MAMDC4-203ENST00000479475 CUX2O14529 1486 aa28.79■■■□□ 2.2
MAMDC4-203ENST00000479475 ARAP1Q96P48 1450 aa28.76■■■□□ 2.19
MAMDC4-203ENST00000479475 HNRNPUL2Q1KMD3 747 aaKnown RBP28.75■■■□□ 2.19
MAMDC4-203ENST00000479475 FGD5Q6ZNL6 1462 aa28.75■■■□□ 2.19
MAMDC4-203ENST00000479475 IGF1RP08069 1367 aa28.73■■■□□ 2.19
MAMDC4-203ENST00000479475 FANCD2Q9BXW9 1451 aa28.72■■■□□ 2.19
MAMDC4-203ENST00000479475 NESP48681 1621 aa28.68■■■□□ 2.18
MAMDC4-203ENST00000479475 KANK4Q5T7N3 995 aaPredicted RBP28.6■■■□□ 2.17
MAMDC4-203ENST00000479475 CARMIL1Q5VZK9 1371 aa28.58■■■□□ 2.17
MAMDC4-203ENST00000479475 ARHGAP35Q9NRY4 1499 aa28.58■■■□□ 2.17
MAMDC4-203ENST00000479475 DNAJC5BQ9UF47 199 aa28.56■■■□□ 2.16
MAMDC4-203ENST00000479475 RAD54L2Q9Y4B4 1467 aa28.54■■■□□ 2.16
MAMDC4-203ENST00000479475 TOPBP1Q92547 1522 aa28.49■■■□□ 2.15
MAMDC4-203ENST00000479475 DNMBPQ6XZF7 1577 aa28.48■■■□□ 2.15
MAMDC4-203ENST00000479475 POLA1P09884 1462 aaPredicted RBP28.46■■■□□ 2.15
MAMDC4-203ENST00000479475 ABCA10Q8WWZ4 1543 aa28.38■■■□□ 2.13
MAMDC4-203ENST00000479475 URB2Q14146 1524 aaKnown RBP28.34■■■□□ 2.13
MAMDC4-203ENST00000479475 LAMC3Q9Y6N6 1575 aa28.33■■■□□ 2.13
MAMDC4-203ENST00000479475 P3H3Q8IVL6 736 aa28.33■■■□□ 2.13
MAMDC4-203ENST00000479475 RRBP1Q9P2E9 1410 aaKnown RBP28.24■■■□□ 2.11
MAMDC4-203ENST00000479475 DIEXFQ68CQ4 756 aaKnown RBP28.23■■■□□ 2.11
MAMDC4-203ENST00000479475 TDRD9Q8NDG6 1382 aaKnown RBP28.23■■■□□ 2.11
MAMDC4-203ENST00000479475 PDS5BQ9NTI5 1447 aa28.2■■■□□ 2.11
MAMDC4-203ENST00000479475 CCNB3Q8WWL7 1395 aa28.17■■■□□ 2.1
MAMDC4-203ENST00000479475 ITGAEP38570 1179 aa28.16■■■□□ 2.1
MAMDC4-203ENST00000479475 TIAM1Q13009 1591 aa28.15■■■□□ 2.1
MAMDC4-203ENST00000479475 FHOD3Q2V2M9 1422 aa28.15■■■□□ 2.1
MAMDC4-203ENST00000479475 ATP1B4Q9UN42 357 aaPredicted RBP28.15■■■□□ 2.1
MAMDC4-203ENST00000479475 ZNF316A6NFI3 1004 aaPredicted RBP28.13■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms