Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 SHC1-201ENST00000366442 780 ntTSL 321.57■■□□□ 1.043e-8■■■□□ 15.1
NCBP2P52298 SHC1-206ENST00000412170 692 ntTSL 521.57■■□□□ 1.043e-8■■■□□ 15.1
NCBP2P52298 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.173e-8■■■□□ 15.1
NCBP2P52298 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.173e-8■■■□□ 15.1
NCBP2P52298 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.33e-8■■■□□ 15.1
NCBP2P52298 SHC1-210ENST00000448116 3481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.463e-8■■■□□ 15.1
NCBP2P52298 SHC1-203ENST00000368449 2879 ntTSL 5 BASIC11.8□□□□□ -0.523e-8■■■□□ 15.1
NCBP2P52298 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.451e-6■■■□□ 15.1
NCBP2P52298 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.411e-6■■■□□ 15.1
NCBP2P52298 PHOSPHO2-202ENST00000438710 908 ntTSL 317.46■□□□□ 0.391e-6■■■□□ 15.1
NCBP2P52298 PHOSPHO2-203ENST00000438838 468 ntTSL 217.46■□□□□ 0.391e-6■■■□□ 15.1
NCBP2P52298 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.341e-6■■■□□ 15.1
NCBP2P52298 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.341e-6■■■□□ 15.1
NCBP2P52298 PHOSPHO2-204ENST00000449906 631 ntTSL 317.18■□□□□ 0.341e-6■■■□□ 15.1
NCBP2P52298 KLHL23-206ENST00000498202 843 ntTSL 315.63■□□□□ 0.091e-6■■■□□ 15.1
NCBP2P52298 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.061e-6■■■□□ 15.1
NCBP2P52298 SEPT9-243ENST00000592407 509 ntTSL 216.42■□□□□ 0.222e-6■■■□□ 15.1
NCBP2P52298 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.099e-7■■■□□ 15.1
NCBP2P52298 ARPC5-203ENST00000367534 622 ntTSL 3 BASIC12.08□□□□□ -0.489e-7■■■□□ 15.1
NCBP2P52298 ARPC5-202ENST00000359856 7209 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.579e-7■■■□□ 15.1
NCBP2P52298 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.44■□□□□ 0.546e-7■■■□□ 15.1
NCBP2P52298 C10orf76-202ENST00000370033 4119 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.456e-7■■■□□ 15.1
NCBP2P52298 RBMS1-214ENST00000491781 1533 ntTSL 1 (best)15.61■□□□□ 0.092e-6■■■□□ 15.1
NCBP2P52298 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.422e-6■■■□□ 15.1
NCBP2P52298 PVT1_1.1-201ENST00000615125 194 ntBASIC21.81■■□□□ 1.082e-7■■■□□ 15.1
NCBP2P52298 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.486e-71■■■□□ 15.1
NCBP2P52298 HNRNPC-221ENST00000555883 1182 ntTSL 1 (best) BASIC11.51□□□□□ -0.576e-71■■■□□ 15.1
NCBP2P52298 HNRNPC-202ENST00000420743 1559 ntTSL 2 BASIC10.99□□□□□ -0.656e-71■■■□□ 15.1
NCBP2P52298 HNRNPC-231ENST00000557336 580 ntTSL 310.03□□□□□ -0.86e-71■■■□□ 15.1
NCBP2P52298 HNRNPC-214ENST00000554969 1924 ntAPPRIS P2 TSL 5 BASIC10.01□□□□□ -0.816e-71■■■□□ 15.1
NCBP2P52298 HNRNPC-232ENST00000557442 1308 ntTSL 29.82□□□□□ -0.846e-71■■■□□ 15.1
NCBP2P52298 HNRNPC-230ENST00000557201 1371 ntTSL 1 (best) BASIC9.65□□□□□ -0.866e-71■■■□□ 15.1
NCBP2P52298 HNRNPC-213ENST00000554891 644 ntTSL 59.64□□□□□ -0.876e-71■■■□□ 15.1
NCBP2P52298 HNRNPC-225ENST00000556513 1403 ntTSL 5 BASIC9.46□□□□□ -0.96e-71■■■□□ 15.1
NCBP2P52298 HNRNPC-208ENST00000553753 1790 ntTSL 5 BASIC9.38□□□□□ -0.916e-71■■■□□ 15.1
NCBP2P52298 HNRNPC-219ENST00000555309 1714 ntTSL 5 BASIC9.17□□□□□ -0.946e-71■■■□□ 15.1
NCBP2P52298 HNRNPC-218ENST00000555215 781 ntTSL 59.06□□□□□ -0.966e-71■■■□□ 15.1
NCBP2P52298 HNRNPC-209ENST00000554383 1039 ntTSL 59.06□□□□□ -0.966e-71■■■□□ 15.1
NCBP2P52298 HNRNPC-223ENST00000556142 1599 ntTSL 5 BASIC8.93□□□□□ -0.986e-71■■■□□ 15.1
NCBP2P52298 HNRNPC-228ENST00000557033 760 ntTSL 38.91□□□□□ -0.986e-71■■■□□ 15.1
NCBP2P52298 HNRNPC-224ENST00000556226 629 ntTSL 58.91□□□□□ -0.986e-71■■■□□ 15.1
NCBP2P52298 HNRNPC-216ENST00000555137 789 ntTSL 38.62□□□□□ -1.036e-71■■■□□ 15.1
NCBP2P52298 HNRNPC-201ENST00000336053 3301 ntTSL 2 BASIC8.16□□□□□ -1.16e-71■■■□□ 15.1
NCBP2P52298 HNRNPC-222ENST00000555914 1658 ntAPPRIS ALT1 TSL 5 BASIC8.09□□□□□ -1.116e-71■■■□□ 15.1
NCBP2P52298 HNRNPC-207ENST00000553614 604 ntTSL 58.03□□□□□ -1.126e-71■■■□□ 15.1
NCBP2P52298 HNRNPC-212ENST00000554539 748 ntTSL 57.54□□□□□ -1.26e-71■■■□□ 15.1
NCBP2P52298 HNRNPC-211ENST00000554455 1784 ntTSL 1 (best) BASIC7.18□□□□□ -1.266e-71■■■□□ 15.1
NCBP2P52298 HNRNPC-226ENST00000556628 1156 ntTSL 1 (best) BASIC7.01□□□□□ -1.296e-71■■■□□ 15.1
NCBP2P52298 HNRNPC-215ENST00000555127 929 ntTSL 26.06□□□□□ -1.446e-71■■■□□ 15.1
NCBP2P52298 HNRNPC-233ENST00000557768 599 ntTSL 34.73□□□□□ -1.656e-71■■■□□ 15.1
NCBP2P52298 AC006449.6-201ENST00000612330 2296 ntBASIC15.55■□□□□ 0.083e-11■■■□□ 15.1
NCBP2P52298 NEK9-204ENST00000554258 578 ntTSL 315.05■□□□□ -03e-11■■■□□ 15.1
NCBP2P52298 AHSA2-204ENST00000463681 453 ntTSL 521.61■■□□□ 1.051e-13■■■□□ 15
NCBP2P52298 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.61□□□□□ -0.071e-323■■■□□ 15
NCBP2P52298 SNHG22-202ENST00000615535 421 nt13.3□□□□□ -0.281e-323■■■□□ 15
NCBP2P52298 SCARNA17-201ENST00000516183 144 ntBASIC-0.87□□□□□ -2.551e-323■■■□□ 15
NCBP2P52298 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.91■□□□□ 0.141e-7■■■□□ 15
NCBP2P52298 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.161e-7■■■□□ 15
NCBP2P52298 PGK1-204ENST00000477335 353 ntTSL 38.69□□□□□ -1.029e-7■■■□□ 15
NCBP2P52298 PGK1-205ENST00000491291 702 ntTSL 58.42□□□□□ -1.069e-7■■■□□ 15
NCBP2P52298 ACP6-204ENST00000493129 543 ntTSL 510.5□□□□□ -0.732e-6■■■□□ 15
NCBP2P52298 ACP6-205ENST00000583509 6923 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.822e-6■■■□□ 15
NCBP2P52298 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC27.17■■□□□ 1.943e-6■■■□□ 15
NCBP2P52298 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.67■□□□□ 0.743e-6■■■□□ 15
NCBP2P52298 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.353e-6■■■□□ 15
NCBP2P52298 RAB43-206ENST00000457077 574 ntTSL 416.51■□□□□ 0.233e-6■■■□□ 15
NCBP2P52298 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.91□□□□□ -0.183e-6■■■□□ 15
NCBP2P52298 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.273e-6■■■□□ 15
NCBP2P52298 RAB43-203ENST00000393305 4215 ntAPPRIS P1 TSL 4 BASIC12.64□□□□□ -0.393e-6■■■□□ 15
NCBP2P52298 RAB43-204ENST00000393307 4203 ntAPPRIS P1 TSL 4 BASIC12.34□□□□□ -0.433e-6■■■□□ 15
NCBP2P52298 RAB43-205ENST00000393308 4193 ntAPPRIS P1 TSL 4 BASIC11.45□□□□□ -0.583e-6■■■□□ 15
NCBP2P52298 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.412e-10■■■□□ 15
NCBP2P52298 TFRC-201ENST00000360110 5111 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.032e-10■■■□□ 15
NCBP2P52298 TFRC-203ENST00000420415 4814 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.212e-10■■■□□ 15
NCBP2P52298 WDR27-206ENST00000474018 951 ntTSL 216.1■□□□□ 0.174e-11■■■□□ 15
NCBP2P52298 SEPT9-241ENST00000591934 553 ntTSL 415.54■□□□□ 0.081e-6■■■□□ 15
NCBP2P52298 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.52■■□□□ 1.045e-7■■■□□ 15
NCBP2P52298 WDR4-206ENST00000479429 759 ntTSL 520.51■□□□□ 0.875e-7■■■□□ 15
NCBP2P52298 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.75e-7■■■□□ 15
NCBP2P52298 WDR4-204ENST00000470658 901 ntTSL 519.11■□□□□ 0.655e-7■■■□□ 15
NCBP2P52298 SNHG12-201ENST00000461448 1629 ntTSL 1 (best)18.29■□□□□ 0.525e-7■■■□□ 15
NCBP2P52298 SNHG12-206ENST00000474814 1903 ntTSL 216.7■□□□□ 0.265e-7■■■□□ 15
NCBP2P52298 SNHG12-208ENST00000481220 751 ntTSL 316.62■□□□□ 0.255e-7■■■□□ 15
NCBP2P52298 SNHG12-203ENST00000464115 712 ntTSL 316.62■□□□□ 0.255e-7■■■□□ 15
NCBP2P52298 WDR4-205ENST00000476326 1977 ntTSL 1 (best)13.94□□□□□ -0.185e-7■■■□□ 15
NCBP2P52298 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC13.29□□□□□ -0.285e-7■■■□□ 15
NCBP2P52298 SNHG12-209ENST00000481368 1588 ntTSL 1 (best)13.19□□□□□ -0.35e-7■■■□□ 15
NCBP2P52298 SNHG12-202ENST00000461832 675 ntTSL 212.92□□□□□ -0.345e-7■■■□□ 15
NCBP2P52298 WDR4-203ENST00000463902 609 ntTSL 312.12□□□□□ -0.475e-7■■■□□ 15
NCBP2P52298 SNHG12-205ENST00000470977 1098 ntTSL 1 (best)11.49□□□□□ -0.575e-7■■■□□ 15
NCBP2P52298 SNHG12-211ENST00000488745 1365 ntTSL 1 (best) BASIC8.28□□□□□ -1.085e-7■■■□□ 15
NCBP2P52298 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.89■□□□□ 0.932e-7■■■□□ 15
NCBP2P52298 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.33■□□□□ 0.682e-7■■■□□ 15
NCBP2P52298 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.252e-6■■■□□ 15
NCBP2P52298 SPPL2B-213ENST00000621568 1017 ntTSL 516.57■□□□□ 0.242e-7■■■□□ 15
NCBP2P52298 SPPL2B-201ENST00000585725 583 ntTSL 315.31■□□□□ 0.042e-7■■■□□ 15
NCBP2P52298 SPPL2B-203ENST00000586332 496 ntTSL 315.01□□□□□ -0.012e-7■■■□□ 15
NCBP2P52298 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.122e-7■■■□□ 15
NCBP2P52298 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.332e-7■■■□□ 15
NCBP2P52298 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.991e-7■■■□□ 15
Retrieved 100 of 18,329 protein–RNA pairs in 112.6 ms