RNA–Protein interactions for RNA: ENST00000393305.5

RAB43-203, Transcript of RAB43, member RAS oncogene family, humanhuman

APPRIS P1 TSL 4 BASIC

Gene RAB43, Length 4,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43-203ENST00000393305 NISCHQ9Y2I1 1504 aa26.59■■□□□ 1.85
RAB43-203ENST00000393305 DCAF8L2P0C7V8 631 aa24.39■■□□□ 1.5
RAB43-203ENST00000393305 SHROOM4Q9ULL8 1493 aa23.56■■□□□ 1.36
RAB43-203ENST00000393305 SUPT5HO00267 1087 aaKnown RBP23.17■■□□□ 1.3
RAB43-203ENST00000393305 ABCC9O60706 1549 aa22.49■■□□□ 1.19
RAB43-203ENST00000393305 CCDC180Q9P1Z9 1646 aa22.35■■□□□ 1.17
RAB43-203ENST00000393305 ZCCHC6Q5VYS8 1495 aaKnown RBP22.17■■□□□ 1.14
RAB43-203ENST00000393305 PABPN1Q86U42 306 aaKnown RBP eCLIP21.81■■□□□ 1.08
RAB43-203ENST00000393305 EHMT2Q96KQ7 1210 aa21.81■■□□□ 1.08
RAB43-203ENST00000393305 SCRIBQ14160 1630 aa21.63■■□□□ 1.05
RAB43-203ENST00000393305 FAM9AQ8IZU1 332 aaPredicted RBP21.63■■□□□ 1.05
RAB43-203ENST00000393305 TRIM41Q8WV44 630 aa21.48■■□□□ 1.03
RAB43-203ENST00000393305 CHIC1Q5VXU3 224 aa21.43■■□□□ 1.02
RAB43-203ENST00000393305 DCAF1Q9Y4B6 1507 aa21.37■■□□□ 1.01
RAB43-203ENST00000393305 NACADO15069 1562 aa21.28■■□□□ 1
RAB43-203ENST00000393305 RB1CC1Q8TDY2 1594 aa21.26■□□□□ 0.99
RAB43-203ENST00000393305 LOC105371045A0A1W2PR82 267 aa21.11■□□□□ 0.97
RAB43-203ENST00000393305 RSF1Q96T23 1441 aaPredicted RBP21.01■□□□□ 0.95
RAB43-203ENST00000393305 RANGAP1P46060 587 aaPredicted RBP20.97■□□□□ 0.95
RAB43-203ENST00000393305 CECR2Q9BXF3 1484 aa20.97■□□□□ 0.95
RAB43-203ENST00000393305 MYO15BQ96JP2 1530 aa20.91■□□□□ 0.94
RAB43-203ENST00000393305 TTBK1Q5TCY1 1321 aaPredicted RBP20.89■□□□□ 0.94
RAB43-203ENST00000393305 UBTFP17480 764 aaKnown RBP20.86■□□□□ 0.93
RAB43-203ENST00000393305 PCGF6Q9BYE7 350 aa20.84■□□□□ 0.93
RAB43-203ENST00000393305 PPARGC1BQ86YN6 1023 aaKnown RBP20.7■□□□□ 0.91
RAB43-203ENST00000393305 MROH2BQ7Z745 1585 aa20.69■□□□□ 0.9
RAB43-203ENST00000393305 APLP2Q06481 763 aa20.62■□□□□ 0.89
RAB43-203ENST00000393305 BAZ1AQ9NRL2 1556 aaPredicted RBP20.61■□□□□ 0.89
RAB43-203ENST00000393305 ATP1B4Q9UN42 357 aaPredicted RBP20.43■□□□□ 0.86
RAB43-203ENST00000393305 WIZO95785 1651 aa20.43■□□□□ 0.86
RAB43-203ENST00000393305 BAZ1BQ9UIG0 1483 aaKnown RBP20.41■□□□□ 0.86
RAB43-203ENST00000393305 CSRNP3Q8WYN3 585 aa20.33■□□□□ 0.85
RAB43-203ENST00000393305 HRCP23327 699 aa20.3■□□□□ 0.84
RAB43-203ENST00000393305 CCDC88BA6NC98 1476 aa20.28■□□□□ 0.84
RAB43-203ENST00000393305 TRIM26Q12899 539 aaPredicted RBP20.26■□□□□ 0.83
RAB43-203ENST00000393305 SMARCA4P51532 1647 aa20.24■□□□□ 0.83
RAB43-203ENST00000393305 ATAD2BQ9ULI0 1458 aa20.16■□□□□ 0.82
RAB43-203ENST00000393305 TOP2AP11388 1531 aaKnown RBP20.13■□□□□ 0.81
RAB43-203ENST00000393305 WRNQ14191 1432 aaPredicted RBP eCLIP20.12■□□□□ 0.81
RAB43-203ENST00000393305 SMARCA2P51531 1590 aa20.1■□□□□ 0.81
RAB43-203ENST00000393305 ABCC8Q09428 1581 aa20.07■□□□□ 0.8
RAB43-203ENST00000393305 CCER1Q8TC90 406 aaPredicted RBP20.07■□□□□ 0.8
RAB43-203ENST00000393305 BICRAQ9NZM4 1560 aa20.06■□□□□ 0.8
RAB43-203ENST00000393305 HNRNPUL2Q1KMD3 747 aaKnown RBP19.97■□□□□ 0.79
RAB43-203ENST00000393305 P3H3Q8IVL6 736 aa19.97■□□□□ 0.79
RAB43-203ENST00000393305 SOGA1O94964 1423 aa19.96■□□□□ 0.79
RAB43-203ENST00000393305 ITGAEP38570 1179 aa19.96■□□□□ 0.79
RAB43-203ENST00000393305 FBLN2P98095 1184 aa19.92■□□□□ 0.78
RAB43-203ENST00000393305 UNC13AQ9UPW8 1703 aa19.92■□□□□ 0.78
RAB43-203ENST00000393305 EIF4G1Q04637 1599 aaKnown RBP19.9■□□□□ 0.78
RAB43-203ENST00000393305 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.87■□□□□ 0.77
RAB43-203ENST00000393305 NCAPD3P42695 1498 aa19.78■□□□□ 0.76
RAB43-203ENST00000393305 ZEB1P37275 1124 aaPredicted RBP19.78■□□□□ 0.76
RAB43-203ENST00000393305 EEA1Q15075 1411 aa19.77■□□□□ 0.76
RAB43-203ENST00000393305 CADPSQ9ULU8 1353 aa19.77■□□□□ 0.75
RAB43-203ENST00000393305 ARID3CA6NKF2 412 aa19.72■□□□□ 0.75
RAB43-203ENST00000393305 CEP162Q5TB80 1403 aa19.72■□□□□ 0.75
RAB43-203ENST00000393305 KIF27Q86VH2 1401 aa19.71■□□□□ 0.75
RAB43-203ENST00000393305 RUSC2Q8N2Y8 1516 aa19.7■□□□□ 0.74
RAB43-203ENST00000393305 GOLGA3Q08378 1498 aa19.7■□□□□ 0.74
RAB43-203ENST00000393305 CLIP1P30622 1438 aa19.68■□□□□ 0.74
RAB43-203ENST00000393305 DNAJC5BQ9UF47 199 aa19.66■□□□□ 0.74
RAB43-203ENST00000393305 TNIKQ9UKE5 1360 aa19.64■□□□□ 0.73
RAB43-203ENST00000393305 CUX2O14529 1486 aa19.64■□□□□ 0.73
RAB43-203ENST00000393305 FAM50AQ14320 339 aaKnown RBP19.63■□□□□ 0.73
RAB43-203ENST00000393305 CEP164Q9UPV0 1460 aa19.62■□□□□ 0.73
RAB43-203ENST00000393305 CC2D2AQ9P2K1 1620 aa19.59■□□□□ 0.73
RAB43-203ENST00000393305 ERCC6Q03468 1493 aa19.54■□□□□ 0.72
RAB43-203ENST00000393305 PDS5BQ9NTI5 1447 aa19.54■□□□□ 0.72
RAB43-203ENST00000393305 TDRD9Q8NDG6 1382 aaKnown RBP19.53■□□□□ 0.72
RAB43-203ENST00000393305 PELP1Q8IZL8 1130 aaKnown RBP19.53■□□□□ 0.72
RAB43-203ENST00000393305 FANCD2Q9BXW9 1451 aa19.52■□□□□ 0.72
RAB43-203ENST00000393305 CARMIL1Q5VZK9 1371 aa19.51■□□□□ 0.71
RAB43-203ENST00000393305 SCAF1Q9H7N4 1312 aaKnown RBP19.51■□□□□ 0.71
RAB43-203ENST00000393305 CHMP7Q8WUX9 453 aaPredicted RBP19.49■□□□□ 0.71
RAB43-203ENST00000393305 HMGXB3Q12766 1538 aa19.48■□□□□ 0.71
RAB43-203ENST00000393305 NESP48681 1621 aa19.48■□□□□ 0.71
RAB43-203ENST00000393305 CFTRP13569 1480 aa19.45■□□□□ 0.7
RAB43-203ENST00000393305 PEG3Q9GZU2 1588 aa19.44■□□□□ 0.7
RAB43-203ENST00000393305 RAPGEF2Q9Y4G8 1499 aa19.43■□□□□ 0.7
RAB43-203ENST00000393305 SYNJ1O43426 1573 aa19.41■□□□□ 0.7
RAB43-203ENST00000393305 FGD5Q6ZNL6 1462 aa19.34■□□□□ 0.69
RAB43-203ENST00000393305 RAD54L2Q9Y4B4 1467 aa19.33■□□□□ 0.69
RAB43-203ENST00000393305 MYT1LQ9UL68 1186 aa19.28■□□□□ 0.68
RAB43-203ENST00000393305 IGF1RP08069 1367 aa19.27■□□□□ 0.67
RAB43-203ENST00000393305 CUX1P39880 1505 aa19.26■□□□□ 0.67
RAB43-203ENST00000393305 ZNF777Q9ULD5 760 aaPredicted RBP19.24■□□□□ 0.67
RAB43-203ENST00000393305 NEUROD1Q13562 356 aa19.23■□□□□ 0.67
RAB43-203ENST00000393305 TRIM52Q96A61 297 aa19.23■□□□□ 0.67
RAB43-203ENST00000393305 KANK4Q5T7N3 995 aaPredicted RBP19.23■□□□□ 0.67
RAB43-203ENST00000393305 MTUS2Q5JR59 1369 aa19.22■□□□□ 0.67
RAB43-203ENST00000393305 VPS8Q8N3P4 1428 aa19.22■□□□□ 0.67
RAB43-203ENST00000393305 CDK11AQ9UQ88 783 aaPredicted RBP19.2■□□□□ 0.66
RAB43-203ENST00000393305 TOP2BQ02880 1626 aa19.17■□□□□ 0.66
RAB43-203ENST00000393305 CHIC2Q9UKJ5 165 aa19.15■□□□□ 0.66
RAB43-203ENST00000393305 TOPBP1Q92547 1522 aa19.11■□□□□ 0.65
RAB43-203ENST00000393305 AQRO60306 1485 aaKnown RBP eCLIP19.1■□□□□ 0.653e-6■■□□□ 13.8
RAB43-203ENST00000393305 POLA1P09884 1462 aaPredicted RBP19.08■□□□□ 0.65
RAB43-203ENST00000393305 GAPVD1Q14C86 1478 aa19.08■□□□□ 0.65
RAB43-203ENST00000393305 FHOD3Q2V2M9 1422 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms