RNA–Protein interactions for RNA: ENST00000398208.2

WDR4-202, Transcript of WD repeat domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene WDR4, Length 2,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDR4-202ENST00000398208 NISCHQ9Y2I1 1504 aa45.61■■■■■ 4.89
WDR4-202ENST00000398208 CCDC180Q9P1Z9 1646 aa39.53■■■■□ 3.92
WDR4-202ENST00000398208 ZCCHC6Q5VYS8 1495 aaKnown RBP38.39■■■■□ 3.74
WDR4-202ENST00000398208 DCAF8L2P0C7V8 631 aa37.75■■■■□ 3.63
WDR4-202ENST00000398208 SHROOM4Q9ULL8 1493 aa37.72■■■■□ 3.63
WDR4-202ENST00000398208 DCAF1Q9Y4B6 1507 aa37.58■■■■□ 3.61
WDR4-202ENST00000398208 ABCC9O60706 1549 aa37.25■■■■□ 3.55
WDR4-202ENST00000398208 MYO15BQ96JP2 1530 aa36.96■■■■□ 3.51
WDR4-202ENST00000398208 NACADO15069 1562 aa36.72■■■■□ 3.47
WDR4-202ENST00000398208 SCRIBQ14160 1630 aa36.6■■■■□ 3.45
WDR4-202ENST00000398208 SUPT5HO00267 1087 aaKnown RBP36.43■■■■□ 3.42
WDR4-202ENST00000398208 RB1CC1Q8TDY2 1594 aa36.35■■■■□ 3.41
WDR4-202ENST00000398208 UNC13AQ9UPW8 1703 aa35.83■■■■□ 3.33
WDR4-202ENST00000398208 RSF1Q96T23 1441 aaPredicted RBP35.57■■■■□ 3.28
WDR4-202ENST00000398208 CECR2Q9BXF3 1484 aa35.54■■■■□ 3.28
WDR4-202ENST00000398208 BICRAQ9NZM4 1560 aa35.36■■■■□ 3.25
WDR4-202ENST00000398208 MROH2BQ7Z745 1585 aa35.35■■■■□ 3.25
WDR4-202ENST00000398208 PABPN1Q86U42 306 aaKnown RBP eCLIP35.25■■■■□ 3.23
WDR4-202ENST00000398208 BAZ1AQ9NRL2 1556 aaPredicted RBP35.16■■■■□ 3.22
WDR4-202ENST00000398208 WIZO95785 1651 aa35.13■■■■□ 3.21
WDR4-202ENST00000398208 SMARCA4P51532 1647 aa35.02■■■■□ 3.2
WDR4-202ENST00000398208 CHIC1Q5VXU3 224 aa34.99■■■■□ 3.19
WDR4-202ENST00000398208 TOP2AP11388 1531 aaKnown RBP34.63■■■■□ 3.13
WDR4-202ENST00000398208 PEG3Q9GZU2 1588 aa34.48■■■■□ 3.11
WDR4-202ENST00000398208 SMARCA2P51531 1590 aa34.38■■■■□ 3.09
WDR4-202ENST00000398208 CCDC88BA6NC98 1476 aa34.34■■■■□ 3.09
WDR4-202ENST00000398208 ATAD2BQ9ULI0 1458 aa34.33■■■■□ 3.09
WDR4-202ENST00000398208 EIF4G1Q04637 1599 aaKnown RBP34.25■■■■□ 3.07
WDR4-202ENST00000398208 BAZ1BQ9UIG0 1483 aaKnown RBP34.16■■■■□ 3.06
WDR4-202ENST00000398208 TRIM41Q8WV44 630 aa34.12■■■■□ 3.05
WDR4-202ENST00000398208 NCAPD3P42695 1498 aa33.9■■■■□ 3.02
WDR4-202ENST00000398208 HMGXB3Q12766 1538 aa33.89■■■■□ 3.02
WDR4-202ENST00000398208 ABCC8Q09428 1581 aa33.85■■■■□ 3.01
WDR4-202ENST00000398208 LOC105371045A0A1W2PR82 267 aa33.78■■■■□ 3
WDR4-202ENST00000398208 CC2D2AQ9P2K1 1620 aa33.67■■■□□ 2.98
WDR4-202ENST00000398208 FAM9AQ8IZU1 332 aaPredicted RBP33.66■■■□□ 2.98
WDR4-202ENST00000398208 WRNQ14191 1432 aaPredicted RBP eCLIP33.45■■■□□ 2.95
WDR4-202ENST00000398208 SYNJ1O43426 1573 aa33.38■■■□□ 2.93
WDR4-202ENST00000398208 EHMT2Q96KQ7 1210 aa33.29■■■□□ 2.92
WDR4-202ENST00000398208 CFTRP13569 1480 aa33.29■■■□□ 2.92
WDR4-202ENST00000398208 SOGA1O94964 1423 aa33.26■■■□□ 2.91
WDR4-202ENST00000398208 PRDM2Q13029 1718 aa33.19■■■□□ 2.9
WDR4-202ENST00000398208 RUSC2Q8N2Y8 1516 aa33.16■■■□□ 2.9
WDR4-202ENST00000398208 TOP2BQ02880 1626 aa33.13■■■□□ 2.89
WDR4-202ENST00000398208 CADPSQ9ULU8 1353 aa33.1■■■□□ 2.89
WDR4-202ENST00000398208 BIVM-ERCC5R4GMW8 1640 aa33.09■■■□□ 2.89
WDR4-202ENST00000398208 EEA1Q15075 1411 aa33.04■■■□□ 2.88
WDR4-202ENST00000398208 CUX1P39880 1505 aa33■■■□□ 2.87
WDR4-202ENST00000398208 CSRNP3Q8WYN3 585 aa32.95■■■□□ 2.87
WDR4-202ENST00000398208 DNAJC5BQ9UF47 199 aa32.89■■■□□ 2.86
WDR4-202ENST00000398208 NESP48681 1621 aa32.86■■■□□ 2.85
WDR4-202ENST00000398208 FANCD2Q9BXW9 1451 aa32.78■■■□□ 2.84
WDR4-202ENST00000398208 GOLGA3Q08378 1498 aa32.71■■■□□ 2.83
WDR4-202ENST00000398208 LAMC3Q9Y6N6 1575 aa32.71■■■□□ 2.83
WDR4-202ENST00000398208 KIF21BO75037 1637 aa32.69■■■□□ 2.82
WDR4-202ENST00000398208 CEP164Q9UPV0 1460 aa32.66■■■□□ 2.82
WDR4-202ENST00000398208 TNIKQ9UKE5 1360 aa32.66■■■□□ 2.82
WDR4-202ENST00000398208 UBTFP17480 764 aaKnown RBP32.63■■■□□ 2.81
WDR4-202ENST00000398208 PCGF6Q9BYE7 350 aa32.6■■■□□ 2.81
WDR4-202ENST00000398208 CEP162Q5TB80 1403 aa32.59■■■□□ 2.81
WDR4-202ENST00000398208 FGD5Q6ZNL6 1462 aa32.58■■■□□ 2.81
WDR4-202ENST00000398208 RAPGEF2Q9Y4G8 1499 aa32.54■■■□□ 2.8
WDR4-202ENST00000398208 KIF27Q86VH2 1401 aa32.53■■■□□ 2.8
WDR4-202ENST00000398208 DNMBPQ6XZF7 1577 aa32.53■■■□□ 2.8
WDR4-202ENST00000398208 TOPBP1Q92547 1522 aa32.48■■■□□ 2.79
WDR4-202ENST00000398208 KIF21AQ7Z4S6 1674 aa32.45■■■□□ 2.78
WDR4-202ENST00000398208 CUX2O14529 1486 aa32.44■■■□□ 2.78
WDR4-202ENST00000398208 PDS5BQ9NTI5 1447 aa32.43■■■□□ 2.78
WDR4-202ENST00000398208 PRXQ9BXM0 1461 aa32.43■■■□□ 2.78
WDR4-202ENST00000398208 URB2Q14146 1524 aaKnown RBP32.39■■■□□ 2.77
WDR4-202ENST00000398208 ERICH3Q5RHP9 1530 aa32.37■■■□□ 2.77
WDR4-202ENST00000398208 TRIM26Q12899 539 aaPredicted RBP32.36■■■□□ 2.77
WDR4-202ENST00000398208 POLA1P09884 1462 aaPredicted RBP32.36■■■□□ 2.77
WDR4-202ENST00000398208 RAD54L2Q9Y4B4 1467 aa32.33■■■□□ 2.77
WDR4-202ENST00000398208 PPARGC1BQ86YN6 1023 aaKnown RBP32.26■■■□□ 2.75
WDR4-202ENST00000398208 IGF1RP08069 1367 aa32.25■■■□□ 2.75
WDR4-202ENST00000398208 CLIP1P30622 1438 aa32.24■■■□□ 2.75
WDR4-202ENST00000398208 ABCA10Q8WWZ4 1543 aa32.23■■■□□ 2.75
WDR4-202ENST00000398208 RANGAP1P46060 587 aaPredicted RBP32.15■■■□□ 2.74
WDR4-202ENST00000398208 WDR97A6NE52 1622 aa32.15■■■□□ 2.74
WDR4-202ENST00000398208 CARMIL1Q5VZK9 1371 aa32.09■■■□□ 2.73
WDR4-202ENST00000398208 MRC2Q9UBG0 1479 aa32.03■■■□□ 2.72
WDR4-202ENST00000398208 VPS8Q8N3P4 1428 aa31.98■■■□□ 2.71
WDR4-202ENST00000398208 ABCA5Q8WWZ7 1642 aa31.98■■■□□ 2.71
WDR4-202ENST00000398208 TARBP1Q13395 1621 aaKnown RBP31.97■■■□□ 2.71
WDR4-202ENST00000398208 TDRD9Q8NDG6 1382 aaKnown RBP31.96■■■□□ 2.71
WDR4-202ENST00000398208 TTBK1Q5TCY1 1321 aaPredicted RBP31.94■■■□□ 2.7
WDR4-202ENST00000398208 CUL7Q14999 1698 aa31.92■■■□□ 2.7
WDR4-202ENST00000398208 ARAP1Q96P48 1450 aa31.91■■■□□ 2.7
WDR4-202ENST00000398208 GAPVD1Q14C86 1478 aa31.89■■■□□ 2.69
WDR4-202ENST00000398208 HRCP23327 699 aa31.87■■■□□ 2.69
WDR4-202ENST00000398208 WDR62O43379 1518 aa31.85■■■□□ 2.69
WDR4-202ENST00000398208 ERCC6Q03468 1493 aa31.83■■■□□ 2.69
WDR4-202ENST00000398208 ARHGAP35Q9NRY4 1499 aa31.83■■■□□ 2.69
WDR4-202ENST00000398208 PBRM1Q86U86 1689 aa31.74■■■□□ 2.67
WDR4-202ENST00000398208 THOC2Q8NI27 1593 aaKnown RBP31.73■■■□□ 2.67
WDR4-202ENST00000398208 CTTNBP2Q8WZ74 1663 aa31.71■■■□□ 2.67
WDR4-202ENST00000398208 AQRO60306 1485 aaKnown RBP eCLIP31.7■■■□□ 2.674e-7■■■■□ 26.1
WDR4-202ENST00000398208 IFT140Q96RY7 1462 aa31.66■■■□□ 2.66
WDR4-202ENST00000398208 APLP2Q06481 763 aa31.66■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms