RNA–Protein interactions for RNA: ENST00000481220.5

SNHG12-208, Transcript of small nucleolar RNA host gene 12, humanhuman

TSL 3

Gene SNHG12, Length 751 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG12-208ENST00000481220 NISCHQ9Y2I1 1504 aa45.06■■■■■ 4.8
SNHG12-208ENST00000481220 CCDC180Q9P1Z9 1646 aa40.16■■■■■ 4.02
SNHG12-208ENST00000481220 ABCC9O60706 1549 aa39.7■■■■□ 3.95
SNHG12-208ENST00000481220 RB1CC1Q8TDY2 1594 aa38■■■■□ 3.67
SNHG12-208ENST00000481220 NACADO15069 1562 aa37.89■■■■□ 3.66
SNHG12-208ENST00000481220 DCAF8L2P0C7V8 631 aa37.71■■■■□ 3.63
SNHG12-208ENST00000481220 MYO15BQ96JP2 1530 aa37.59■■■■□ 3.61
SNHG12-208ENST00000481220 ZCCHC6Q5VYS8 1495 aaKnown RBP37.45■■■■□ 3.59
SNHG12-208ENST00000481220 DCAF1Q9Y4B6 1507 aa37.28■■■■□ 3.56
SNHG12-208ENST00000481220 UNC13AQ9UPW8 1703 aa37.13■■■■□ 3.54
SNHG12-208ENST00000481220 PABPN1Q86U42 306 aaKnown RBP eCLIP37.06■■■■□ 3.52
SNHG12-208ENST00000481220 BICRAQ9NZM4 1560 aa36.95■■■■□ 3.51
SNHG12-208ENST00000481220 DNAJC5BQ9UF47 199 aa36.91■■■■□ 3.5
SNHG12-208ENST00000481220 SCRIBQ14160 1630 aa36.61■■■■□ 3.45
SNHG12-208ENST00000481220 SHROOM4Q9ULL8 1493 aa36.48■■■■□ 3.43
SNHG12-208ENST00000481220 EIF4G1Q04637 1599 aaKnown RBP35.96■■■■□ 3.35
SNHG12-208ENST00000481220 CC2D2AQ9P2K1 1620 aa35.9■■■■□ 3.34
SNHG12-208ENST00000481220 CECR2Q9BXF3 1484 aa35.73■■■■□ 3.31
SNHG12-208ENST00000481220 NCAPD3P42695 1498 aa35.02■■■■□ 3.2
SNHG12-208ENST00000481220 SMARCA4P51532 1647 aa35.01■■■■□ 3.19
SNHG12-208ENST00000481220 ATAD2BQ9ULI0 1458 aa34.97■■■■□ 3.19
SNHG12-208ENST00000481220 BAZ1AQ9NRL2 1556 aaPredicted RBP34.91■■■■□ 3.18
SNHG12-208ENST00000481220 SMARCA2P51531 1590 aa34.84■■■■□ 3.17
SNHG12-208ENST00000481220 HMGXB3Q12766 1538 aa34.76■■■■□ 3.16
SNHG12-208ENST00000481220 MROH2BQ7Z745 1585 aa34.73■■■■□ 3.15
SNHG12-208ENST00000481220 PEG3Q9GZU2 1588 aa34.73■■■■□ 3.15
SNHG12-208ENST00000481220 BAZ1BQ9UIG0 1483 aaKnown RBP34.59■■■■□ 3.13
SNHG12-208ENST00000481220 WIZO95785 1651 aa34.29■■■■□ 3.08
SNHG12-208ENST00000481220 NESP48681 1621 aa34.27■■■■□ 3.08
SNHG12-208ENST00000481220 RSF1Q96T23 1441 aaPredicted RBP34.21■■■■□ 3.07
SNHG12-208ENST00000481220 ERCC6Q03468 1493 aa34.2■■■■□ 3.06
SNHG12-208ENST00000481220 LAMC3Q9Y6N6 1575 aa34.09■■■■□ 3.05
SNHG12-208ENST00000481220 CUX2O14529 1486 aa34.03■■■■□ 3.04
SNHG12-208ENST00000481220 CADPSQ9ULU8 1353 aa33.96■■■■□ 3.03
SNHG12-208ENST00000481220 TOP2AP11388 1531 aaKnown RBP33.9■■■■□ 3.02
SNHG12-208ENST00000481220 PDS5BQ9NTI5 1447 aa33.87■■■■□ 3.01
SNHG12-208ENST00000481220 THOC2Q8NI27 1593 aaKnown RBP33.81■■■■□ 3
SNHG12-208ENST00000481220 KIF21AQ7Z4S6 1674 aa33.8■■■■□ 3
SNHG12-208ENST00000481220 CFTRP13569 1480 aa33.69■■■□□ 2.98
SNHG12-208ENST00000481220 MRC2Q9UBG0 1479 aa33.56■■■□□ 2.96
SNHG12-208ENST00000481220 CCDC88BA6NC98 1476 aa33.55■■■□□ 2.96
SNHG12-208ENST00000481220 FANCD2Q9BXW9 1451 aa33.54■■■□□ 2.96
SNHG12-208ENST00000481220 DNAJC5Q9H3Z4 198 aa33.5■■■□□ 2.95
SNHG12-208ENST00000481220 CEP164Q9UPV0 1460 aa33.5■■■□□ 2.95
SNHG12-208ENST00000481220 WDR62O43379 1518 aa33.48■■■□□ 2.95
SNHG12-208ENST00000481220 PRDM2Q13029 1718 aa33.28■■■□□ 2.92
SNHG12-208ENST00000481220 URB2Q14146 1524 aaKnown RBP33.26■■■□□ 2.91
SNHG12-208ENST00000481220 TOPBP1Q92547 1522 aa32.97■■■□□ 2.87
SNHG12-208ENST00000481220 SUPT5HO00267 1087 aaKnown RBP32.96■■■□□ 2.87
SNHG12-208ENST00000481220 ABCC8Q09428 1581 aa32.92■■■□□ 2.86
SNHG12-208ENST00000481220 DNMBPQ6XZF7 1577 aa32.87■■■□□ 2.85
SNHG12-208ENST00000481220 IFT140Q96RY7 1462 aa32.85■■■□□ 2.85
SNHG12-208ENST00000481220 ZNF608Q9ULD9 1512 aaPredicted RBP32.77■■■□□ 2.84
SNHG12-208ENST00000481220 POLA1P09884 1462 aaPredicted RBP32.67■■■□□ 2.82
SNHG12-208ENST00000481220 TARBP1Q13395 1621 aaKnown RBP32.66■■■□□ 2.82
SNHG12-208ENST00000481220 CUX1P39880 1505 aa32.59■■■□□ 2.81
SNHG12-208ENST00000481220 EIF4G3O43432 1585 aaKnown RBP32.57■■■□□ 2.8
SNHG12-208ENST00000481220 OSCARQ8IYS5 282 aa32.56■■■□□ 2.8
SNHG12-208ENST00000481220 RAD54L2Q9Y4B4 1467 aa32.54■■■□□ 2.8
SNHG12-208ENST00000481220 AQRO60306 1485 aaKnown RBP eCLIP32.53■■■□□ 2.83e-10■■■■■ 36.3
SNHG12-208ENST00000481220 SOGA1O94964 1423 aa32.52■■■□□ 2.8
SNHG12-208ENST00000481220 FGD5Q6ZNL6 1462 aa32.51■■■□□ 2.79
SNHG12-208ENST00000481220 TDRD9Q8NDG6 1382 aaKnown RBP32.4■■■□□ 2.78
SNHG12-208ENST00000481220 WDR97A6NE52 1622 aa32.33■■■□□ 2.77
SNHG12-208ENST00000481220 WRNQ14191 1432 aaPredicted RBP eCLIP32.21■■■□□ 2.75
SNHG12-208ENST00000481220 ABCA10Q8WWZ4 1543 aa32.21■■■□□ 2.75
SNHG12-208ENST00000481220 CHD1O14646 1710 aa32.2■■■□□ 2.74
SNHG12-208ENST00000481220 TOP2BQ02880 1626 aa32.18■■■□□ 2.74
SNHG12-208ENST00000481220 SNAPC4Q5SXM2 1469 aa32.18■■■□□ 2.74
SNHG12-208ENST00000481220 GRIN2BQ13224 1484 aa32.17■■■□□ 2.74
SNHG12-208ENST00000481220 BIVM-ERCC5R4GMW8 1640 aa32.17■■■□□ 2.74
SNHG12-208ENST00000481220 SYNJ1O43426 1573 aa32.16■■■□□ 2.74
SNHG12-208ENST00000481220 FBLN2P98095 1184 aa32.13■■■□□ 2.73
SNHG12-208ENST00000481220 MAGI1Q96QZ7 1491 aaPredicted RBP32.13■■■□□ 2.73
SNHG12-208ENST00000481220 GAPVD1Q14C86 1478 aa32.12■■■□□ 2.73
SNHG12-208ENST00000481220 TRIM41Q8WV44 630 aa32.12■■■□□ 2.73
SNHG12-208ENST00000481220 ABCA5Q8WWZ7 1642 aa32.09■■■□□ 2.73
SNHG12-208ENST00000481220 RIMBP3CA6NJZ7 1639 aa32.06■■■□□ 2.72
SNHG12-208ENST00000481220 RIMBP3BA6NNM3 1639 aa32.06■■■□□ 2.72
SNHG12-208ENST00000481220 RIMBP3Q9UFD9 1639 aa32.06■■■□□ 2.72
SNHG12-208ENST00000481220 ARHGEF11O15085 1522 aa32.03■■■□□ 2.72
SNHG12-208ENST00000481220 PBRM1Q86U86 1689 aa32.02■■■□□ 2.72
SNHG12-208ENST00000481220 CHMP7Q8WUX9 453 aaPredicted RBP32.02■■■□□ 2.72
SNHG12-208ENST00000481220 SYNJ2O15056 1496 aa32.02■■■□□ 2.72
SNHG12-208ENST00000481220 CLASP1Q7Z460 1538 aa31.92■■■□□ 2.7
SNHG12-208ENST00000481220 ERICH3Q5RHP9 1530 aa31.8■■■□□ 2.68
SNHG12-208ENST00000481220 ADAMTS12P58397 1594 aa31.79■■■□□ 2.68
SNHG12-208ENST00000481220 GRIN2AQ12879 1464 aa31.77■■■□□ 2.68
SNHG12-208ENST00000481220 ARAP1Q96P48 1450 aa31.77■■■□□ 2.68
SNHG12-208ENST00000481220 CYB5RLQ6IPT4 315 aa31.75■■■□□ 2.67
SNHG12-208ENST00000481220 FHAD1B1AJZ9 1412 aa31.75■■■□□ 2.67
SNHG12-208ENST00000481220 NUP160Q12769 1436 aa31.67■■■□□ 2.66
SNHG12-208ENST00000481220 CEP170Q5SW79 1584 aa31.64■■■□□ 2.65
SNHG12-208ENST00000481220 IGF1RP08069 1367 aa31.56■■■□□ 2.64
SNHG12-208ENST00000481220 KIF27Q86VH2 1401 aa31.55■■■□□ 2.64
SNHG12-208ENST00000481220 SHROOM2Q13796 1616 aa31.46■■■□□ 2.63
SNHG12-208ENST00000481220 ERCC6L2Q5T890 1561 aa31.46■■■□□ 2.63
SNHG12-208ENST00000481220 CUL7Q14999 1698 aa31.38■■■□□ 2.61
SNHG12-208ENST00000481220 RUSC2Q8N2Y8 1516 aa31.34■■■□□ 2.61
SNHG12-208ENST00000481220 JPH4Q96JJ6 628 aa31.34■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms