RNA–Protein interactions for RNA: ENST00000461832.1

SNHG12-202, Transcript of small nucleolar RNA host gene 12, humanhuman

TSL 2

Gene SNHG12, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG12-202ENST00000461832 NISCHQ9Y2I1 1504 aa33.68■■■□□ 2.98
SNHG12-202ENST00000461832 ABCC9O60706 1549 aa30.54■■■□□ 2.48
SNHG12-202ENST00000461832 DNAJC5BQ9UF47 199 aa29.83■■■□□ 2.37
SNHG12-202ENST00000461832 CCDC180Q9P1Z9 1646 aa29.8■■■□□ 2.36
SNHG12-202ENST00000461832 RB1CC1Q8TDY2 1594 aa28.39■■■□□ 2.14
SNHG12-202ENST00000461832 PABPN1Q86U42 306 aaKnown RBP eCLIP28.3■■■□□ 2.12
SNHG12-202ENST00000461832 DCAF8L2P0C7V8 631 aa28.14■■■□□ 2.1
SNHG12-202ENST00000461832 ZCCHC6Q5VYS8 1495 aaKnown RBP28.08■■■□□ 2.09
SNHG12-202ENST00000461832 NACADO15069 1562 aa28.03■■■□□ 2.08
SNHG12-202ENST00000461832 DNAJC5Q9H3Z4 198 aa28■■■□□ 2.07
SNHG12-202ENST00000461832 UNC13AQ9UPW8 1703 aa28■■■□□ 2.07
SNHG12-202ENST00000461832 MYO15BQ96JP2 1530 aa27.88■■■□□ 2.05
SNHG12-202ENST00000461832 DCAF1Q9Y4B6 1507 aa27.82■■■□□ 2.04
SNHG12-202ENST00000461832 BICRAQ9NZM4 1560 aa27.82■■■□□ 2.04
SNHG12-202ENST00000461832 CECR2Q9BXF3 1484 aa27.55■■■□□ 2
SNHG12-202ENST00000461832 CC2D2AQ9P2K1 1620 aa27.5■■□□□ 1.99
SNHG12-202ENST00000461832 SCRIBQ14160 1630 aa27.3■■□□□ 1.96
SNHG12-202ENST00000461832 EIF4G1Q04637 1599 aaKnown RBP27.13■■□□□ 1.93
SNHG12-202ENST00000461832 SHROOM4Q9ULL8 1493 aa26.97■■□□□ 1.91
SNHG12-202ENST00000461832 CUX2O14529 1486 aa26.61■■□□□ 1.85
SNHG12-202ENST00000461832 TRIM41Q8WV44 630 aa26.35■■□□□ 1.81
SNHG12-202ENST00000461832 ERCC6Q03468 1493 aa26.3■■□□□ 1.8
SNHG12-202ENST00000461832 SMARCA4P51532 1647 aa26.09■■□□□ 1.77
SNHG12-202ENST00000461832 BAZ1AQ9NRL2 1556 aaPredicted RBP26.07■■□□□ 1.76
SNHG12-202ENST00000461832 NESP48681 1621 aa25.99■■□□□ 1.75
SNHG12-202ENST00000461832 MROH2BQ7Z745 1585 aa25.99■■□□□ 1.75
SNHG12-202ENST00000461832 ATAD2BQ9ULI0 1458 aa25.94■■□□□ 1.74
SNHG12-202ENST00000461832 NCAPD3P42695 1498 aa25.89■■□□□ 1.73
SNHG12-202ENST00000461832 SMARCA2P51531 1590 aa25.87■■□□□ 1.73
SNHG12-202ENST00000461832 THOC2Q8NI27 1593 aaKnown RBP25.86■■□□□ 1.73
SNHG12-202ENST00000461832 PEG3Q9GZU2 1588 aa25.81■■□□□ 1.72
SNHG12-202ENST00000461832 HMGXB3Q12766 1538 aa25.75■■□□□ 1.71
SNHG12-202ENST00000461832 RSF1Q96T23 1441 aaPredicted RBP25.73■■□□□ 1.71
SNHG12-202ENST00000461832 BAZ1BQ9UIG0 1483 aaKnown RBP25.72■■□□□ 1.71
SNHG12-202ENST00000461832 WIZO95785 1651 aa25.68■■□□□ 1.7
SNHG12-202ENST00000461832 KIF21AQ7Z4S6 1674 aa25.57■■□□□ 1.68
SNHG12-202ENST00000461832 TOP2AP11388 1531 aaKnown RBP25.41■■□□□ 1.66
SNHG12-202ENST00000461832 LAMC3Q9Y6N6 1575 aa25.39■■□□□ 1.66
SNHG12-202ENST00000461832 PDS5BQ9NTI5 1447 aa25.23■■□□□ 1.63
SNHG12-202ENST00000461832 OSCARQ8IYS5 282 aa25.22■■□□□ 1.63
SNHG12-202ENST00000461832 SUPT5HO00267 1087 aaKnown RBP25.21■■□□□ 1.63
SNHG12-202ENST00000461832 WDR62O43379 1518 aa25.17■■□□□ 1.62
SNHG12-202ENST00000461832 MRC2Q9UBG0 1479 aa25.17■■□□□ 1.62
SNHG12-202ENST00000461832 RIMBP3CA6NJZ7 1639 aa25.17■■□□□ 1.62
SNHG12-202ENST00000461832 RIMBP3BA6NNM3 1639 aa25.17■■□□□ 1.62
SNHG12-202ENST00000461832 RIMBP3Q9UFD9 1639 aa25.17■■□□□ 1.62
SNHG12-202ENST00000461832 CADPSQ9ULU8 1353 aa25.17■■□□□ 1.62
SNHG12-202ENST00000461832 CCDC88BA6NC98 1476 aa25.14■■□□□ 1.61
SNHG12-202ENST00000461832 CFTRP13569 1480 aa25.03■■□□□ 1.6
SNHG12-202ENST00000461832 ARHGEF11O15085 1522 aa24.92■■□□□ 1.58
SNHG12-202ENST00000461832 FANCD2Q9BXW9 1451 aa24.88■■□□□ 1.57
SNHG12-202ENST00000461832 AEBP2Q6ZN18 517 aaPredicted RBP24.86■■□□□ 1.57
SNHG12-202ENST00000461832 TRHP20396 242 aaPredicted RBP24.84■■□□□ 1.57
SNHG12-202ENST00000461832 CEP164Q9UPV0 1460 aa24.83■■□□□ 1.56
SNHG12-202ENST00000461832 CYB5RLQ6IPT4 315 aa24.81■■□□□ 1.56
SNHG12-202ENST00000461832 PRDM2Q13029 1718 aa24.73■■□□□ 1.55
SNHG12-202ENST00000461832 URB2Q14146 1524 aaKnown RBP24.7■■□□□ 1.54
SNHG12-202ENST00000461832 ARAP1Q96P48 1450 aa24.64■■□□□ 1.54
SNHG12-202ENST00000461832 ZNF608Q9ULD9 1512 aaPredicted RBP24.62■■□□□ 1.53
SNHG12-202ENST00000461832 TOPBP1Q92547 1522 aa24.49■■□□□ 1.51
SNHG12-202ENST00000461832 DNMBPQ6XZF7 1577 aa24.45■■□□□ 1.5
SNHG12-202ENST00000461832 ABCC8Q09428 1581 aa24.43■■□□□ 1.5
SNHG12-202ENST00000461832 CHD1O14646 1710 aa24.43■■□□□ 1.5
SNHG12-202ENST00000461832 CUX1P39880 1505 aa24.37■■□□□ 1.49
SNHG12-202ENST00000461832 EIF4G3O43432 1585 aaKnown RBP24.34■■□□□ 1.49
SNHG12-202ENST00000461832 IFT140Q96RY7 1462 aa24.34■■□□□ 1.49
SNHG12-202ENST00000461832 POLA1P09884 1462 aaPredicted RBP24.3■■□□□ 1.48
SNHG12-202ENST00000461832 FGD5Q6ZNL6 1462 aa24.26■■□□□ 1.47
SNHG12-202ENST00000461832 WRNQ14191 1432 aaPredicted RBP eCLIP24.25■■□□□ 1.47
SNHG12-202ENST00000461832 AQRO60306 1485 aaKnown RBP eCLIP24.22■■□□□ 1.473e-10■■■■■ 41
SNHG12-202ENST00000461832 RAD54L2Q9Y4B4 1467 aa24.22■■□□□ 1.47
SNHG12-202ENST00000461832 SOGA1O94964 1423 aa24.19■■□□□ 1.46
SNHG12-202ENST00000461832 FBLN2P98095 1184 aa24.19■■□□□ 1.46
SNHG12-202ENST00000461832 TARBP1Q13395 1621 aaKnown RBP24.19■■□□□ 1.46
SNHG12-202ENST00000461832 SYNJ1O43426 1573 aa24.18■■□□□ 1.46
SNHG12-202ENST00000461832 ILDR1Q86SU0 546 aaPredicted RBP24.18■■□□□ 1.46
SNHG12-202ENST00000461832 TOP2BQ02880 1626 aa24.14■■□□□ 1.46
SNHG12-202ENST00000461832 BIVM-ERCC5R4GMW8 1640 aa24.13■■□□□ 1.45
SNHG12-202ENST00000461832 TDRD9Q8NDG6 1382 aaKnown RBP24.08■■□□□ 1.45
SNHG12-202ENST00000461832 CLASP1Q7Z460 1538 aa24.08■■□□□ 1.45
SNHG12-202ENST00000461832 ABCA10Q8WWZ4 1543 aa24■■□□□ 1.43
SNHG12-202ENST00000461832 WDR97A6NE52 1622 aa23.99■■□□□ 1.43
SNHG12-202ENST00000461832 GAPVD1Q14C86 1478 aa23.91■■□□□ 1.42
SNHG12-202ENST00000461832 GRIN2BQ13224 1484 aa23.89■■□□□ 1.42
SNHG12-202ENST00000461832 ABCA5Q8WWZ7 1642 aa23.88■■□□□ 1.41
SNHG12-202ENST00000461832 SNAPC4Q5SXM2 1469 aa23.88■■□□□ 1.41
SNHG12-202ENST00000461832 MAGI1Q96QZ7 1491 aaPredicted RBP23.8■■□□□ 1.4
SNHG12-202ENST00000461832 PBRM1Q86U86 1689 aa23.79■■□□□ 1.4
SNHG12-202ENST00000461832 ERCC6L2Q5T890 1561 aa23.78■■□□□ 1.4
SNHG12-202ENST00000461832 KDM4FA0A1W2PPD8 638 aa23.77■■□□□ 1.4
SNHG12-202ENST00000461832 KIF13AQ9H1H9 1805 aa23.76■■□□□ 1.39
SNHG12-202ENST00000461832 CHMP7Q8WUX9 453 aaPredicted RBP23.76■■□□□ 1.39
SNHG12-202ENST00000461832 SYNJ2O15056 1496 aa23.71■■□□□ 1.39
SNHG12-202ENST00000461832 KIF27Q86VH2 1401 aa23.71■■□□□ 1.39
SNHG12-202ENST00000461832 ERICH3Q5RHP9 1530 aa23.7■■□□□ 1.38
SNHG12-202ENST00000461832 ADAMTS12P58397 1594 aa23.66■■□□□ 1.38
SNHG12-202ENST00000461832 FHAD1B1AJZ9 1412 aa23.64■■□□□ 1.37
SNHG12-202ENST00000461832 IGF1RP08069 1367 aa23.64■■□□□ 1.37
SNHG12-202ENST00000461832 RUSC2Q8N2Y8 1516 aa23.59■■□□□ 1.37
SNHG12-202ENST00000461832 GRIN2AQ12879 1464 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms