RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 NISCHQ9Y2I1 1504 aa25.99■■□□□ 1.75
SHC1-210ENST00000448116 SHROOM4Q9ULL8 1493 aa22.71■■□□□ 1.23
SHC1-210ENST00000448116 SUPT5HO00267 1087 aaKnown RBP22.39■■□□□ 1.18
SHC1-210ENST00000448116 DCAF8L2P0C7V8 631 aa22.13■■□□□ 1.13
SHC1-210ENST00000448116 ZCCHC6Q5VYS8 1495 aaKnown RBP21.95■■□□□ 1.1
SHC1-210ENST00000448116 CCDC180Q9P1Z9 1646 aa21.8■■□□□ 1.08
SHC1-210ENST00000448116 CHIC1Q5VXU3 224 aa21.63■■□□□ 1.05
SHC1-210ENST00000448116 MYO15BQ96JP2 1530 aa21.47■■□□□ 1.03
SHC1-210ENST00000448116 PCGF6Q9BYE7 350 aa21.27■■□□□ 1
SHC1-210ENST00000448116 HRCP23327 699 aa21.2■□□□□ 0.98
SHC1-210ENST00000448116 LOC105371045A0A1W2PR82 267 aa21.15■□□□□ 0.98
SHC1-210ENST00000448116 DCAF1Q9Y4B6 1507 aa21.12■□□□□ 0.97
SHC1-210ENST00000448116 PPARGC1BQ86YN6 1023 aaKnown RBP20.91■□□□□ 0.94
SHC1-210ENST00000448116 SCRIBQ14160 1630 aa20.78■□□□□ 0.92
SHC1-210ENST00000448116 FAM9AQ8IZU1 332 aaPredicted RBP20.76■□□□□ 0.91
SHC1-210ENST00000448116 TRIM41Q8WV44 630 aa20.74■□□□□ 0.91
SHC1-210ENST00000448116 EHMT2Q96KQ7 1210 aa20.72■□□□□ 0.91
SHC1-210ENST00000448116 RSF1Q96T23 1441 aaPredicted RBP20.71■□□□□ 0.91
SHC1-210ENST00000448116 ABCC9O60706 1549 aa20.7■□□□□ 0.9
SHC1-210ENST00000448116 TRIM26Q12899 539 aaPredicted RBP20.68■□□□□ 0.9
SHC1-210ENST00000448116 RB1CC1Q8TDY2 1594 aa20.47■□□□□ 0.87
SHC1-210ENST00000448116 CECR2Q9BXF3 1484 aa20.41■□□□□ 0.86
SHC1-210ENST00000448116 MROH2BQ7Z745 1585 aa20.28■□□□□ 0.84
SHC1-210ENST00000448116 NACADO15069 1562 aa20.25■□□□□ 0.83
SHC1-210ENST00000448116 ZEB1P37275 1124 aaPredicted RBP20.24■□□□□ 0.83
SHC1-210ENST00000448116 PELP1Q8IZL8 1130 aaKnown RBP20.17■□□□□ 0.82
SHC1-210ENST00000448116 WIZO95785 1651 aa20.15■□□□□ 0.82
SHC1-210ENST00000448116 TTBK1Q5TCY1 1321 aaPredicted RBP20.06■□□□□ 0.8
SHC1-210ENST00000448116 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.98■□□□□ 0.79
SHC1-210ENST00000448116 CCER1Q8TC90 406 aaPredicted RBP19.93■□□□□ 0.78
SHC1-210ENST00000448116 BAZ1AQ9NRL2 1556 aaPredicted RBP19.93■□□□□ 0.78
SHC1-210ENST00000448116 ABCC8Q09428 1581 aa19.85■□□□□ 0.77
SHC1-210ENST00000448116 PABPN1Q86U42 306 aaKnown RBP eCLIP19.84■□□□□ 0.778e-7■■□□□ 14.4
SHC1-210ENST00000448116 CCDC88BA6NC98 1476 aa19.82■□□□□ 0.76
SHC1-210ENST00000448116 UBTFP17480 764 aaKnown RBP19.81■□□□□ 0.76
SHC1-210ENST00000448116 TOP2AP11388 1531 aaKnown RBP19.76■□□□□ 0.75
SHC1-210ENST00000448116 SOGA1O94964 1423 aa19.75■□□□□ 0.75
SHC1-210ENST00000448116 EIF4G1Q04637 1599 aaKnown RBP19.73■□□□□ 0.75
SHC1-210ENST00000448116 SMARCA4P51532 1647 aa19.72■□□□□ 0.75
SHC1-210ENST00000448116 MYT1Q01538 1121 aa19.71■□□□□ 0.75
SHC1-210ENST00000448116 CSRNP3Q8WYN3 585 aa19.71■□□□□ 0.75
SHC1-210ENST00000448116 CEP162Q5TB80 1403 aa19.69■□□□□ 0.74
SHC1-210ENST00000448116 SMARCA2P51531 1590 aa19.67■□□□□ 0.74
SHC1-210ENST00000448116 SCAF1Q9H7N4 1312 aaKnown RBP19.67■□□□□ 0.74
SHC1-210ENST00000448116 RUSC2Q8N2Y8 1516 aa19.64■□□□□ 0.73
SHC1-210ENST00000448116 TNIKQ9UKE5 1360 aa19.6■□□□□ 0.73
SHC1-210ENST00000448116 RANGAP1P46060 587 aaPredicted RBP19.57■□□□□ 0.72
SHC1-210ENST00000448116 DIEXFQ68CQ4 756 aaKnown RBP19.55■□□□□ 0.72
SHC1-210ENST00000448116 WRNQ14191 1432 aaPredicted RBP eCLIP19.55■□□□□ 0.72
SHC1-210ENST00000448116 UNC13AQ9UPW8 1703 aa19.52■□□□□ 0.72
SHC1-210ENST00000448116 HNRNPUL2Q1KMD3 747 aaKnown RBP19.49■□□□□ 0.71
SHC1-210ENST00000448116 EEA1Q15075 1411 aa19.49■□□□□ 0.71
SHC1-210ENST00000448116 GOLGA3Q08378 1498 aa19.45■□□□□ 0.7
SHC1-210ENST00000448116 PRKCSHP14314 528 aaPredicted RBP19.45■□□□□ 0.7
SHC1-210ENST00000448116 NEUROD1Q13562 356 aa19.44■□□□□ 0.7
SHC1-210ENST00000448116 ACIN1Q9UKV3 1341 aaKnown RBP19.42■□□□□ 0.7
SHC1-210ENST00000448116 APLP2Q06481 763 aa19.4■□□□□ 0.7
SHC1-210ENST00000448116 BICRAQ9NZM4 1560 aa19.37■□□□□ 0.69
SHC1-210ENST00000448116 CENPBP07199 599 aaPredicted RBP19.35■□□□□ 0.69
SHC1-210ENST00000448116 CLIP1P30622 1438 aa19.32■□□□□ 0.68
SHC1-210ENST00000448116 ZNF316A6NFI3 1004 aaPredicted RBP19.32■□□□□ 0.68
SHC1-210ENST00000448116 CEP164Q9UPV0 1460 aa19.31■□□□□ 0.68
SHC1-210ENST00000448116 GTF3C3Q9Y5Q9 886 aa19.29■□□□□ 0.68
SHC1-210ENST00000448116 SYNJ1O43426 1573 aa19.29■□□□□ 0.68
SHC1-210ENST00000448116 BAZ1BQ9UIG0 1483 aaKnown RBP19.28■□□□□ 0.68
SHC1-210ENST00000448116 YTHDC1Q96MU7 727 aaKnown RBP19.28■□□□□ 0.68
SHC1-210ENST00000448116 ATAD2BQ9ULI0 1458 aa19.27■□□□□ 0.68
SHC1-210ENST00000448116 RAPGEF2Q9Y4G8 1499 aa19.21■□□□□ 0.67
SHC1-210ENST00000448116 PEG3Q9GZU2 1588 aa19.19■□□□□ 0.66
SHC1-210ENST00000448116 VPS8Q8N3P4 1428 aa19.18■□□□□ 0.66
SHC1-210ENST00000448116 KIF21BO75037 1637 aa19.14■□□□□ 0.65
SHC1-210ENST00000448116 MIER1Q8N108 512 aa19.12■□□□□ 0.65
SHC1-210ENST00000448116 KANK4Q5T7N3 995 aaPredicted RBP19.02■□□□□ 0.63
SHC1-210ENST00000448116 ITGAEP38570 1179 aa19■□□□□ 0.63
SHC1-210ENST00000448116 TOP2BQ02880 1626 aa18.97■□□□□ 0.63
SHC1-210ENST00000448116 PRXQ9BXM0 1461 aa18.9■□□□□ 0.62
SHC1-210ENST00000448116 KIF27Q86VH2 1401 aa18.88■□□□□ 0.61
SHC1-210ENST00000448116 ARAP1Q96P48 1450 aa18.87■□□□□ 0.61
SHC1-210ENST00000448116 BCL11AQ9H165 835 aa18.86■□□□□ 0.61
SHC1-210ENST00000448116 DHX57Q6P158 1386 aaKnown RBP18.86■□□□□ 0.61
SHC1-210ENST00000448116 CUX1P39880 1505 aa18.84■□□□□ 0.61
SHC1-210ENST00000448116 BIVM-ERCC5R4GMW8 1640 aa18.82■□□□□ 0.6
SHC1-210ENST00000448116 NCAPD3P42695 1498 aa18.82■□□□□ 0.6
SHC1-210ENST00000448116 ERICH3Q5RHP9 1530 aa18.82■□□□□ 0.6
SHC1-210ENST00000448116 ATP1B4Q9UN42 357 aaPredicted RBP18.8■□□□□ 0.6
SHC1-210ENST00000448116 CLSPNQ9HAW4 1339 aa18.77■□□□□ 0.6
SHC1-210ENST00000448116 P3H3Q8IVL6 736 aa18.75■□□□□ 0.59
SHC1-210ENST00000448116 CCNB3Q8WWL7 1395 aa18.74■□□□□ 0.59
SHC1-210ENST00000448116 CUX2O14529 1486 aa18.72■□□□□ 0.59
SHC1-210ENST00000448116 CFTRP13569 1480 aa18.72■□□□□ 0.59
SHC1-210ENST00000448116 HMGXB3Q12766 1538 aa18.72■□□□□ 0.59
SHC1-210ENST00000448116 ARHGAP35Q9NRY4 1499 aa18.72■□□□□ 0.59
SHC1-210ENST00000448116 FAM50AQ14320 339 aaKnown RBP18.69■□□□□ 0.58
SHC1-210ENST00000448116 RRBP1Q9P2E9 1410 aaKnown RBP18.69■□□□□ 0.58
SHC1-210ENST00000448116 IGF1RP08069 1367 aa18.67■□□□□ 0.58
SHC1-210ENST00000448116 CARMIL1Q5VZK9 1371 aa18.65■□□□□ 0.58
SHC1-210ENST00000448116 RAB3GAP2Q9H2M9 1393 aa18.62■□□□□ 0.57
SHC1-210ENST00000448116 CADPSQ9ULU8 1353 aa18.59■□□□□ 0.57
SHC1-210ENST00000448116 SIN3AQ96ST3 1273 aa18.58■□□□□ 0.56
SHC1-210ENST00000448116 SLC24A1O60721 1099 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms