RNA–Protein interactions for RNA: ENST00000618220.4

SPPL2B-212, Transcript of signal peptide peptidase like 2B, humanhuman

TSL 1 (best) BASIC

Gene SPPL2B, Length 2,459 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL2B-212ENST00000618220 NISCHQ9Y2I1 1504 aa44.42■■■■■ 4.7
SPPL2B-212ENST00000618220 CCDC180Q9P1Z9 1646 aa38.16■■■■□ 3.7
SPPL2B-212ENST00000618220 ZCCHC6Q5VYS8 1495 aaKnown RBP37.37■■■■□ 3.57
SPPL2B-212ENST00000618220 SHROOM4Q9ULL8 1493 aa37.26■■■■□ 3.56
SPPL2B-212ENST00000618220 DCAF8L2P0C7V8 631 aa37.2■■■■□ 3.55
SPPL2B-212ENST00000618220 DCAF1Q9Y4B6 1507 aa36.41■■■■□ 3.42
SPPL2B-212ENST00000618220 ABCC9O60706 1549 aa36.22■■■■□ 3.39
SPPL2B-212ENST00000618220 SUPT5HO00267 1087 aaKnown RBP36.11■■■■□ 3.37
SPPL2B-212ENST00000618220 MYO15BQ96JP2 1530 aa35.7■■■■□ 3.31
SPPL2B-212ENST00000618220 SCRIBQ14160 1630 aa35.67■■■■□ 3.3
SPPL2B-212ENST00000618220 NACADO15069 1562 aa35.52■■■■□ 3.28
SPPL2B-212ENST00000618220 RB1CC1Q8TDY2 1594 aa35.16■■■■□ 3.22
SPPL2B-212ENST00000618220 RSF1Q96T23 1441 aaPredicted RBP34.8■■■■□ 3.16
SPPL2B-212ENST00000618220 CECR2Q9BXF3 1484 aa34.74■■■■□ 3.15
SPPL2B-212ENST00000618220 CHIC1Q5VXU3 224 aa34.64■■■■□ 3.14
SPPL2B-212ENST00000618220 UNC13AQ9UPW8 1703 aa34.58■■■■□ 3.13
SPPL2B-212ENST00000618220 MROH2BQ7Z745 1585 aa34.5■■■■□ 3.11
SPPL2B-212ENST00000618220 PABPN1Q86U42 306 aaKnown RBP eCLIP34.48■■■■□ 3.11
SPPL2B-212ENST00000618220 WIZO95785 1651 aa34.26■■■■□ 3.08
SPPL2B-212ENST00000618220 BICRAQ9NZM4 1560 aa34.23■■■■□ 3.07
SPPL2B-212ENST00000618220 BAZ1AQ9NRL2 1556 aaPredicted RBP34.18■■■■□ 3.06
SPPL2B-212ENST00000618220 SMARCA4P51532 1647 aa34.01■■■■□ 3.03
SPPL2B-212ENST00000618220 LOC105371045A0A1W2PR82 267 aa33.74■■■□□ 2.99
SPPL2B-212ENST00000618220 TOP2AP11388 1531 aaKnown RBP33.69■■■□□ 2.98
SPPL2B-212ENST00000618220 TRIM41Q8WV44 630 aa33.69■■■□□ 2.98
SPPL2B-212ENST00000618220 PCGF6Q9BYE7 350 aa33.57■■■□□ 2.96
SPPL2B-212ENST00000618220 CCDC88BA6NC98 1476 aa33.56■■■□□ 2.96
SPPL2B-212ENST00000618220 SMARCA2P51531 1590 aa33.49■■■□□ 2.95
SPPL2B-212ENST00000618220 FAM9AQ8IZU1 332 aaPredicted RBP33.41■■■□□ 2.94
SPPL2B-212ENST00000618220 HRCP23327 699 aa33.39■■■□□ 2.94
SPPL2B-212ENST00000618220 ATAD2BQ9ULI0 1458 aa33.38■■■□□ 2.93
SPPL2B-212ENST00000618220 PEG3Q9GZU2 1588 aa33.38■■■□□ 2.93
SPPL2B-212ENST00000618220 EIF4G1Q04637 1599 aaKnown RBP33.34■■■□□ 2.93
SPPL2B-212ENST00000618220 BAZ1BQ9UIG0 1483 aaKnown RBP33.24■■■□□ 2.91
SPPL2B-212ENST00000618220 EHMT2Q96KQ7 1210 aa33.19■■■□□ 2.9
SPPL2B-212ENST00000618220 ABCC8Q09428 1581 aa33.18■■■□□ 2.9
SPPL2B-212ENST00000618220 PPARGC1BQ86YN6 1023 aaKnown RBP32.93■■■□□ 2.86
SPPL2B-212ENST00000618220 NCAPD3P42695 1498 aa32.89■■■□□ 2.86
SPPL2B-212ENST00000618220 TRIM26Q12899 539 aaPredicted RBP32.8■■■□□ 2.84
SPPL2B-212ENST00000618220 HMGXB3Q12766 1538 aa32.78■■■□□ 2.84
SPPL2B-212ENST00000618220 WRNQ14191 1432 aaPredicted RBP eCLIP32.73■■■□□ 2.835e-6■■■□□ 14.6
SPPL2B-212ENST00000618220 SOGA1O94964 1423 aa32.7■■■□□ 2.82
SPPL2B-212ENST00000618220 RUSC2Q8N2Y8 1516 aa32.6■■■□□ 2.81
SPPL2B-212ENST00000618220 SYNJ1O43426 1573 aa32.59■■■□□ 2.81
SPPL2B-212ENST00000618220 CC2D2AQ9P2K1 1620 aa32.59■■■□□ 2.81
SPPL2B-212ENST00000618220 CSRNP3Q8WYN3 585 aa32.42■■■□□ 2.78
SPPL2B-212ENST00000618220 CFTRP13569 1480 aa32.37■■■□□ 2.77
SPPL2B-212ENST00000618220 EEA1Q15075 1411 aa32.29■■■□□ 2.76
SPPL2B-212ENST00000618220 TOP2BQ02880 1626 aa32.25■■■□□ 2.75
SPPL2B-212ENST00000618220 UBTFP17480 764 aaKnown RBP32.24■■■□□ 2.75
SPPL2B-212ENST00000618220 CADPSQ9ULU8 1353 aa32.21■■■□□ 2.75
SPPL2B-212ENST00000618220 CUX1P39880 1505 aa32.17■■■□□ 2.74
SPPL2B-212ENST00000618220 BIVM-ERCC5R4GMW8 1640 aa32.13■■■□□ 2.73
SPPL2B-212ENST00000618220 DNAJC5BQ9UF47 199 aa32.12■■■□□ 2.73
SPPL2B-212ENST00000618220 TNIKQ9UKE5 1360 aa32.07■■■□□ 2.72
SPPL2B-212ENST00000618220 CEP162Q5TB80 1403 aa32.07■■■□□ 2.72
SPPL2B-212ENST00000618220 GOLGA3Q08378 1498 aa32.05■■■□□ 2.72
SPPL2B-212ENST00000618220 NESP48681 1621 aa32■■■□□ 2.71
SPPL2B-212ENST00000618220 PRDM2Q13029 1718 aa31.98■■■□□ 2.71
SPPL2B-212ENST00000618220 CEP164Q9UPV0 1460 aa31.97■■■□□ 2.71
SPPL2B-212ENST00000618220 RAPGEF2Q9Y4G8 1499 aa31.93■■■□□ 2.7
SPPL2B-212ENST00000618220 ZEB1P37275 1124 aaPredicted RBP31.92■■■□□ 2.7
SPPL2B-212ENST00000618220 RANGAP1P46060 587 aaPredicted RBP31.91■■■□□ 2.7
SPPL2B-212ENST00000618220 KIF21BO75037 1637 aa31.9■■■□□ 2.7
SPPL2B-212ENST00000618220 FANCD2Q9BXW9 1451 aa31.89■■■□□ 2.7
SPPL2B-212ENST00000618220 TTBK1Q5TCY1 1321 aaPredicted RBP31.87■■■□□ 2.69
SPPL2B-212ENST00000618220 KIF27Q86VH2 1401 aa31.79■■■□□ 2.68
SPPL2B-212ENST00000618220 FGD5Q6ZNL6 1462 aa31.75■■■□□ 2.67
SPPL2B-212ENST00000618220 CUX2O14529 1486 aa31.71■■■□□ 2.67
SPPL2B-212ENST00000618220 PRXQ9BXM0 1461 aa31.69■■■□□ 2.66
SPPL2B-212ENST00000618220 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.69■■■□□ 2.66
SPPL2B-212ENST00000618220 CLIP1P30622 1438 aa31.68■■■□□ 2.66
SPPL2B-212ENST00000618220 LAMC3Q9Y6N6 1575 aa31.61■■■□□ 2.65
SPPL2B-212ENST00000618220 RAD54L2Q9Y4B4 1467 aa31.58■■■□□ 2.65
SPPL2B-212ENST00000618220 TOPBP1Q92547 1522 aa31.57■■■□□ 2.65
SPPL2B-212ENST00000618220 IGF1RP08069 1367 aa31.56■■■□□ 2.64
SPPL2B-212ENST00000618220 ERICH3Q5RHP9 1530 aa31.55■■■□□ 2.64
SPPL2B-212ENST00000618220 DNMBPQ6XZF7 1577 aa31.55■■■□□ 2.64
SPPL2B-212ENST00000618220 CCER1Q8TC90 406 aaPredicted RBP31.52■■■□□ 2.64
SPPL2B-212ENST00000618220 POLA1P09884 1462 aaPredicted RBP31.51■■■□□ 2.63
SPPL2B-212ENST00000618220 URB2Q14146 1524 aaKnown RBP31.48■■■□□ 2.63
SPPL2B-212ENST00000618220 PDS5BQ9NTI5 1447 aa31.47■■■□□ 2.63
SPPL2B-212ENST00000618220 CARMIL1Q5VZK9 1371 aa31.4■■■□□ 2.62
SPPL2B-212ENST00000618220 VPS8Q8N3P4 1428 aa31.4■■■□□ 2.62
SPPL2B-212ENST00000618220 KIF21AQ7Z4S6 1674 aa31.39■■■□□ 2.61
SPPL2B-212ENST00000618220 ABCA10Q8WWZ4 1543 aa31.34■■■□□ 2.61
SPPL2B-212ENST00000618220 TDRD9Q8NDG6 1382 aaKnown RBP31.28■■■□□ 2.6
SPPL2B-212ENST00000618220 ARAP1Q96P48 1450 aa31.27■■■□□ 2.6
SPPL2B-212ENST00000618220 APLP2Q06481 763 aa31.26■■■□□ 2.6
SPPL2B-212ENST00000618220 ARHGAP35Q9NRY4 1499 aa31.18■■■□□ 2.58
SPPL2B-212ENST00000618220 WDR97A6NE52 1622 aa31.1■■■□□ 2.57
SPPL2B-212ENST00000618220 P3H3Q8IVL6 736 aa31.09■■■□□ 2.57
SPPL2B-212ENST00000618220 GAPVD1Q14C86 1478 aa31.06■■■□□ 2.56
SPPL2B-212ENST00000618220 KANK4Q5T7N3 995 aaPredicted RBP31.05■■■□□ 2.56
SPPL2B-212ENST00000618220 MRC2Q9UBG0 1479 aa31.03■■■□□ 2.56
SPPL2B-212ENST00000618220 HNRNPUL2Q1KMD3 747 aaKnown RBP31.02■■■□□ 2.56
SPPL2B-212ENST00000618220 ABCA5Q8WWZ7 1642 aa31.01■■■□□ 2.55
SPPL2B-212ENST00000618220 TARBP1Q13395 1621 aaKnown RBP30.99■■■□□ 2.55
SPPL2B-212ENST00000618220 CUL7Q14999 1698 aa30.97■■■□□ 2.55
SPPL2B-212ENST00000618220 AQRO60306 1485 aaKnown RBP eCLIP30.95■■■□□ 2.543e-7■■■■■ 44.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms