RNA–Protein interactions for RNA: ENST00000474814.1

SNHG12-206, Transcript of small nucleolar RNA host gene 12, humanhuman

TSL 2

Gene SNHG12, Length 1,903 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG12-206ENST00000474814 NISCHQ9Y2I1 1504 aa40.07■■■■■ 4.01
SNHG12-206ENST00000474814 CCDC180Q9P1Z9 1646 aa34.9■■■■□ 3.18
SNHG12-206ENST00000474814 ZCCHC6Q5VYS8 1495 aaKnown RBP33.68■■■□□ 2.98
SNHG12-206ENST00000474814 DCAF1Q9Y4B6 1507 aa33.11■■■□□ 2.89
SNHG12-206ENST00000474814 DCAF8L2P0C7V8 631 aa33.07■■■□□ 2.88
SNHG12-206ENST00000474814 ABCC9O60706 1549 aa33.01■■■□□ 2.87
SNHG12-206ENST00000474814 SHROOM4Q9ULL8 1493 aa32.74■■■□□ 2.83
SNHG12-206ENST00000474814 MYO15BQ96JP2 1530 aa32.69■■■□□ 2.82
SNHG12-206ENST00000474814 NACADO15069 1562 aa32.5■■■□□ 2.79
SNHG12-206ENST00000474814 RB1CC1Q8TDY2 1594 aa32.21■■■□□ 2.75
SNHG12-206ENST00000474814 SCRIBQ14160 1630 aa32.15■■■□□ 2.74
SNHG12-206ENST00000474814 UNC13AQ9UPW8 1703 aa31.61■■■□□ 2.65
SNHG12-206ENST00000474814 SUPT5HO00267 1087 aaKnown RBP31.49■■■□□ 2.63
SNHG12-206ENST00000474814 BICRAQ9NZM4 1560 aa31.29■■■□□ 2.6
SNHG12-206ENST00000474814 CECR2Q9BXF3 1484 aa31.16■■■□□ 2.58
SNHG12-206ENST00000474814 PABPN1Q86U42 306 aaKnown RBP eCLIP31.15■■■□□ 2.58
SNHG12-206ENST00000474814 RSF1Q96T23 1441 aaPredicted RBP31.11■■■□□ 2.57
SNHG12-206ENST00000474814 MROH2BQ7Z745 1585 aa30.98■■■□□ 2.55
SNHG12-206ENST00000474814 BAZ1AQ9NRL2 1556 aaPredicted RBP30.93■■■□□ 2.54
SNHG12-206ENST00000474814 SMARCA4P51532 1647 aa30.8■■■□□ 2.52
SNHG12-206ENST00000474814 WIZO95785 1651 aa30.73■■■□□ 2.51
SNHG12-206ENST00000474814 PEG3Q9GZU2 1588 aa30.41■■■□□ 2.46
SNHG12-206ENST00000474814 TOP2AP11388 1531 aaKnown RBP30.4■■■□□ 2.46
SNHG12-206ENST00000474814 EIF4G1Q04637 1599 aaKnown RBP30.32■■■□□ 2.44
SNHG12-206ENST00000474814 ATAD2BQ9ULI0 1458 aa30.29■■■□□ 2.44
SNHG12-206ENST00000474814 SMARCA2P51531 1590 aa30.25■■■□□ 2.43
SNHG12-206ENST00000474814 CHIC1Q5VXU3 224 aa30.17■■■□□ 2.42
SNHG12-206ENST00000474814 BAZ1BQ9UIG0 1483 aaKnown RBP30.11■■■□□ 2.41
SNHG12-206ENST00000474814 CCDC88BA6NC98 1476 aa30.09■■■□□ 2.41
SNHG12-206ENST00000474814 NCAPD3P42695 1498 aa30.01■■■□□ 2.39
SNHG12-206ENST00000474814 HMGXB3Q12766 1538 aa29.97■■■□□ 2.39
SNHG12-206ENST00000474814 CC2D2AQ9P2K1 1620 aa29.87■■■□□ 2.37
SNHG12-206ENST00000474814 TRIM41Q8WV44 630 aa29.59■■■□□ 2.33
SNHG12-206ENST00000474814 ABCC8Q09428 1581 aa29.49■■■□□ 2.31
SNHG12-206ENST00000474814 CFTRP13569 1480 aa29.36■■■□□ 2.29
SNHG12-206ENST00000474814 WRNQ14191 1432 aaPredicted RBP eCLIP29.27■■■□□ 2.28
SNHG12-206ENST00000474814 CADPSQ9ULU8 1353 aa29.24■■■□□ 2.27
SNHG12-206ENST00000474814 PRDM2Q13029 1718 aa29.2■■■□□ 2.26
SNHG12-206ENST00000474814 SYNJ1O43426 1573 aa29.17■■■□□ 2.26
SNHG12-206ENST00000474814 DNAJC5BQ9UF47 199 aa29.16■■■□□ 2.26
SNHG12-206ENST00000474814 FAM9AQ8IZU1 332 aaPredicted RBP29.08■■■□□ 2.25
SNHG12-206ENST00000474814 LOC105371045A0A1W2PR82 267 aa29.03■■■□□ 2.24
SNHG12-206ENST00000474814 TOP2BQ02880 1626 aa29.03■■■□□ 2.24
SNHG12-206ENST00000474814 NESP48681 1621 aa29.01■■■□□ 2.23
SNHG12-206ENST00000474814 BIVM-ERCC5R4GMW8 1640 aa29■■■□□ 2.23
SNHG12-206ENST00000474814 LAMC3Q9Y6N6 1575 aa28.97■■■□□ 2.23
SNHG12-206ENST00000474814 CUX1P39880 1505 aa28.97■■■□□ 2.23
SNHG12-206ENST00000474814 SOGA1O94964 1423 aa28.94■■■□□ 2.22
SNHG12-206ENST00000474814 FANCD2Q9BXW9 1451 aa28.93■■■□□ 2.22
SNHG12-206ENST00000474814 RUSC2Q8N2Y8 1516 aa28.84■■■□□ 2.21
SNHG12-206ENST00000474814 EEA1Q15075 1411 aa28.84■■■□□ 2.21
SNHG12-206ENST00000474814 PDS5BQ9NTI5 1447 aa28.74■■■□□ 2.19
SNHG12-206ENST00000474814 CEP164Q9UPV0 1460 aa28.74■■■□□ 2.19
SNHG12-206ENST00000474814 CSRNP3Q8WYN3 585 aa28.69■■■□□ 2.18
SNHG12-206ENST00000474814 EHMT2Q96KQ7 1210 aa28.69■■■□□ 2.18
SNHG12-206ENST00000474814 DNMBPQ6XZF7 1577 aa28.67■■■□□ 2.18
SNHG12-206ENST00000474814 KIF21AQ7Z4S6 1674 aa28.65■■■□□ 2.18
SNHG12-206ENST00000474814 FGD5Q6ZNL6 1462 aa28.63■■■□□ 2.17
SNHG12-206ENST00000474814 TOPBP1Q92547 1522 aa28.62■■■□□ 2.17
SNHG12-206ENST00000474814 URB2Q14146 1524 aaKnown RBP28.59■■■□□ 2.17
SNHG12-206ENST00000474814 HRCP23327 699 aa28.58■■■□□ 2.17
SNHG12-206ENST00000474814 KIF27Q86VH2 1401 aa28.52■■■□□ 2.16
SNHG12-206ENST00000474814 PCGF6Q9BYE7 350 aa28.5■■■□□ 2.15
SNHG12-206ENST00000474814 POLA1P09884 1462 aaPredicted RBP28.49■■■□□ 2.15
SNHG12-206ENST00000474814 KIF21BO75037 1637 aa28.49■■■□□ 2.15
SNHG12-206ENST00000474814 GOLGA3Q08378 1498 aa28.47■■■□□ 2.15
SNHG12-206ENST00000474814 CUX2O14529 1486 aa28.45■■■□□ 2.14
SNHG12-206ENST00000474814 RAD54L2Q9Y4B4 1467 aa28.41■■■□□ 2.14
SNHG12-206ENST00000474814 MRC2Q9UBG0 1479 aa28.39■■■□□ 2.14
SNHG12-206ENST00000474814 TNIKQ9UKE5 1360 aa28.38■■■□□ 2.13
SNHG12-206ENST00000474814 ABCA10Q8WWZ4 1543 aa28.37■■■□□ 2.13
SNHG12-206ENST00000474814 PRXQ9BXM0 1461 aa28.35■■■□□ 2.13
SNHG12-206ENST00000474814 RAPGEF2Q9Y4G8 1499 aa28.35■■■□□ 2.13
SNHG12-206ENST00000474814 UBTFP17480 764 aaKnown RBP28.33■■■□□ 2.13
SNHG12-206ENST00000474814 ERICH3Q5RHP9 1530 aa28.29■■■□□ 2.12
SNHG12-206ENST00000474814 WDR97A6NE52 1622 aa28.29■■■□□ 2.12
SNHG12-206ENST00000474814 ERCC6Q03468 1493 aa28.28■■■□□ 2.12
SNHG12-206ENST00000474814 IGF1RP08069 1367 aa28.28■■■□□ 2.12
SNHG12-206ENST00000474814 CEP162Q5TB80 1403 aa28.25■■■□□ 2.11
SNHG12-206ENST00000474814 WDR62O43379 1518 aa28.25■■■□□ 2.11
SNHG12-206ENST00000474814 TARBP1Q13395 1621 aaKnown RBP28.2■■■□□ 2.11
SNHG12-206ENST00000474814 THOC2Q8NI27 1593 aaKnown RBP28.17■■■□□ 2.1
SNHG12-206ENST00000474814 ABCA5Q8WWZ7 1642 aa28.15■■■□□ 2.1
SNHG12-206ENST00000474814 TRIM26Q12899 539 aaPredicted RBP28.12■■■□□ 2.09
SNHG12-206ENST00000474814 CARMIL1Q5VZK9 1371 aa28.12■■■□□ 2.09
SNHG12-206ENST00000474814 TDRD9Q8NDG6 1382 aaKnown RBP28.12■■■□□ 2.09
SNHG12-206ENST00000474814 GAPVD1Q14C86 1478 aa28.08■■■□□ 2.09
SNHG12-206ENST00000474814 IFT140Q96RY7 1462 aa28.04■■■□□ 2.08
SNHG12-206ENST00000474814 CUL7Q14999 1698 aa28.04■■■□□ 2.08
SNHG12-206ENST00000474814 CLIP1P30622 1438 aa28.02■■■□□ 2.08
SNHG12-206ENST00000474814 AQRO60306 1485 aaKnown RBP eCLIP27.95■■■□□ 2.063e-10■■■■■ 36.3
SNHG12-206ENST00000474814 PBRM1Q86U86 1689 aa27.93■■■□□ 2.06
SNHG12-206ENST00000474814 ZNF608Q9ULD9 1512 aaPredicted RBP27.92■■■□□ 2.06
SNHG12-206ENST00000474814 RANGAP1P46060 587 aaPredicted RBP27.89■■■□□ 2.06
SNHG12-206ENST00000474814 GRIN2BQ13224 1484 aa27.85■■■□□ 2.05
SNHG12-206ENST00000474814 PPARGC1BQ86YN6 1023 aaKnown RBP27.82■■■□□ 2.04
SNHG12-206ENST00000474814 EIF4G3O43432 1585 aaKnown RBP27.82■■■□□ 2.04
SNHG12-206ENST00000474814 ADAMTS12P58397 1594 aa27.78■■■□□ 2.04
SNHG12-206ENST00000474814 VPS8Q8N3P4 1428 aa27.78■■■□□ 2.04
SNHG12-206ENST00000474814 ARAP1Q96P48 1450 aa27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms