RNA–Protein interactions for RNA: ENST00000610743.4

SPPL2B-207, Transcript of signal peptide peptidase like 2B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPPL2B, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL2B-207ENST00000610743 NISCHQ9Y2I1 1504 aa34.13■■■■□ 3.05
SPPL2B-207ENST00000610743 CCDC180Q9P1Z9 1646 aa29.7■■■□□ 2.34
SPPL2B-207ENST00000610743 ZCCHC6Q5VYS8 1495 aaKnown RBP28.72■■■□□ 2.19
SPPL2B-207ENST00000610743 DCAF1Q9Y4B6 1507 aa28.18■■■□□ 2.1
SPPL2B-207ENST00000610743 DCAF8L2P0C7V8 631 aa28.09■■■□□ 2.09
SPPL2B-207ENST00000610743 SHROOM4Q9ULL8 1493 aa28■■■□□ 2.07
SPPL2B-207ENST00000610743 ABCC9O60706 1549 aa27.97■■■□□ 2.07
SPPL2B-207ENST00000610743 MYO15BQ96JP2 1530 aa27.77■■■□□ 2.04
SPPL2B-207ENST00000610743 NACADO15069 1562 aa27.58■■■□□ 2.01
SPPL2B-207ENST00000610743 SCRIBQ14160 1630 aa27.39■■□□□ 1.97
SPPL2B-207ENST00000610743 RB1CC1Q8TDY2 1594 aa27.32■■□□□ 1.96
SPPL2B-207ENST00000610743 UNC13AQ9UPW8 1703 aa26.96■■□□□ 1.91
SPPL2B-207ENST00000610743 SUPT5HO00267 1087 aaKnown RBP26.95■■□□□ 1.9
SPPL2B-207ENST00000610743 BICRAQ9NZM4 1560 aa26.6■■□□□ 1.85
SPPL2B-207ENST00000610743 CECR2Q9BXF3 1484 aa26.57■■□□□ 1.84
SPPL2B-207ENST00000610743 RSF1Q96T23 1441 aaPredicted RBP26.54■■□□□ 1.84
SPPL2B-207ENST00000610743 MROH2BQ7Z745 1585 aa26.42■■□□□ 1.82
SPPL2B-207ENST00000610743 PABPN1Q86U42 306 aaKnown RBP eCLIP26.4■■□□□ 1.822e-6■■■■□ 21
SPPL2B-207ENST00000610743 BAZ1AQ9NRL2 1556 aaPredicted RBP26.32■■□□□ 1.8
SPPL2B-207ENST00000610743 WIZO95785 1651 aa26.25■■□□□ 1.79
SPPL2B-207ENST00000610743 SMARCA4P51532 1647 aa26.24■■□□□ 1.79
SPPL2B-207ENST00000610743 TOP2AP11388 1531 aaKnown RBP25.9■■□□□ 1.74
SPPL2B-207ENST00000610743 CHIC1Q5VXU3 224 aa25.89■■□□□ 1.73
SPPL2B-207ENST00000610743 PEG3Q9GZU2 1588 aa25.89■■□□□ 1.73
SPPL2B-207ENST00000610743 EIF4G1Q04637 1599 aaKnown RBP25.73■■□□□ 1.71
SPPL2B-207ENST00000610743 ATAD2BQ9ULI0 1458 aa25.73■■□□□ 1.71
SPPL2B-207ENST00000610743 SMARCA2P51531 1590 aa25.71■■□□□ 1.71
SPPL2B-207ENST00000610743 CCDC88BA6NC98 1476 aa25.65■■□□□ 1.7
SPPL2B-207ENST00000610743 BAZ1BQ9UIG0 1483 aaKnown RBP25.58■■□□□ 1.69
SPPL2B-207ENST00000610743 HMGXB3Q12766 1538 aa25.46■■□□□ 1.67
SPPL2B-207ENST00000610743 NCAPD3P42695 1498 aa25.45■■□□□ 1.67
SPPL2B-207ENST00000610743 CC2D2AQ9P2K1 1620 aa25.33■■□□□ 1.65
SPPL2B-207ENST00000610743 TRIM41Q8WV44 630 aa25.28■■□□□ 1.64
SPPL2B-207ENST00000610743 HRCP23327 699 aa25.27■■□□□ 1.64
SPPL2B-207ENST00000610743 ABCC8Q09428 1581 aa25.23■■□□□ 1.63
SPPL2B-207ENST00000610743 PELP1Q8IZL8 1130 aaKnown RBP24.98■■□□□ 1.59
SPPL2B-207ENST00000610743 CFTRP13569 1480 aa24.95■■□□□ 1.58
SPPL2B-207ENST00000610743 WRNQ14191 1432 aaPredicted RBP eCLIP24.95■■□□□ 1.585e-6■■■□□ 14.6
SPPL2B-207ENST00000610743 LOC105371045A0A1W2PR82 267 aa24.95■■□□□ 1.58
SPPL2B-207ENST00000610743 PPARGC1BQ86YN6 1023 aaKnown RBP24.95■■□□□ 1.58
SPPL2B-207ENST00000610743 SYNJ1O43426 1573 aa24.93■■□□□ 1.58
SPPL2B-207ENST00000610743 PRDM2Q13029 1718 aa24.93■■□□□ 1.58
SPPL2B-207ENST00000610743 FAM9AQ8IZU1 332 aaPredicted RBP24.89■■□□□ 1.58
SPPL2B-207ENST00000610743 PCGF6Q9BYE7 350 aa24.84■■□□□ 1.57
SPPL2B-207ENST00000610743 CADPSQ9ULU8 1353 aa24.81■■□□□ 1.56
SPPL2B-207ENST00000610743 TOP2BQ02880 1626 aa24.77■■□□□ 1.56
SPPL2B-207ENST00000610743 BIVM-ERCC5R4GMW8 1640 aa24.76■■□□□ 1.55
SPPL2B-207ENST00000610743 SOGA1O94964 1423 aa24.74■■□□□ 1.55
SPPL2B-207ENST00000610743 DNAJC5BQ9UF47 199 aa24.72■■□□□ 1.55
SPPL2B-207ENST00000610743 CUX1P39880 1505 aa24.69■■□□□ 1.54
SPPL2B-207ENST00000610743 RUSC2Q8N2Y8 1516 aa24.69■■□□□ 1.54
SPPL2B-207ENST00000610743 NESP48681 1621 aa24.65■■□□□ 1.54
SPPL2B-207ENST00000610743 EEA1Q15075 1411 aa24.6■■□□□ 1.53
SPPL2B-207ENST00000610743 LAMC3Q9Y6N6 1575 aa24.58■■□□□ 1.53
SPPL2B-207ENST00000610743 EHMT2Q96KQ7 1210 aa24.57■■□□□ 1.52
SPPL2B-207ENST00000610743 FANCD2Q9BXW9 1451 aa24.56■■□□□ 1.52
SPPL2B-207ENST00000610743 CSRNP3Q8WYN3 585 aa24.49■■□□□ 1.51
SPPL2B-207ENST00000610743 DNMBPQ6XZF7 1577 aa24.38■■□□□ 1.49
SPPL2B-207ENST00000610743 KIF21AQ7Z4S6 1674 aa24.38■■□□□ 1.49
SPPL2B-207ENST00000610743 CEP164Q9UPV0 1460 aa24.38■■□□□ 1.49
SPPL2B-207ENST00000610743 KIF21BO75037 1637 aa24.37■■□□□ 1.49
SPPL2B-207ENST00000610743 FGD5Q6ZNL6 1462 aa24.37■■□□□ 1.49
SPPL2B-207ENST00000610743 TOPBP1Q92547 1522 aa24.33■■□□□ 1.49
SPPL2B-207ENST00000610743 PDS5BQ9NTI5 1447 aa24.33■■□□□ 1.49
SPPL2B-207ENST00000610743 GOLGA3Q08378 1498 aa24.33■■□□□ 1.49
SPPL2B-207ENST00000610743 URB2Q14146 1524 aaKnown RBP24.29■■□□□ 1.48
SPPL2B-207ENST00000610743 KIF27Q86VH2 1401 aa24.27■■□□□ 1.48
SPPL2B-207ENST00000610743 TNIKQ9UKE5 1360 aa24.27■■□□□ 1.48
SPPL2B-207ENST00000610743 POLA1P09884 1462 aaPredicted RBP24.23■■□□□ 1.47
SPPL2B-207ENST00000610743 RAPGEF2Q9Y4G8 1499 aa24.23■■□□□ 1.47
SPPL2B-207ENST00000610743 CUX2O14529 1486 aa24.22■■□□□ 1.47
SPPL2B-207ENST00000610743 PRXQ9BXM0 1461 aa24.2■■□□□ 1.46
SPPL2B-207ENST00000610743 TRIM26Q12899 539 aaPredicted RBP24.19■■□□□ 1.46
SPPL2B-207ENST00000610743 CEP162Q5TB80 1403 aa24.19■■□□□ 1.46
SPPL2B-207ENST00000610743 RAD54L2Q9Y4B4 1467 aa24.18■■□□□ 1.46
SPPL2B-207ENST00000610743 UBTFP17480 764 aaKnown RBP24.18■■□□□ 1.46
SPPL2B-207ENST00000610743 MYT1Q01538 1121 aa24.18■■□□□ 1.46
SPPL2B-207ENST00000610743 ERICH3Q5RHP9 1530 aa24.16■■□□□ 1.46
SPPL2B-207ENST00000610743 WDR97A6NE52 1622 aa24.14■■□□□ 1.45
SPPL2B-207ENST00000610743 ABCA10Q8WWZ4 1543 aa24.13■■□□□ 1.45
SPPL2B-207ENST00000610743 IGF1RP08069 1367 aa24.07■■□□□ 1.44
SPPL2B-207ENST00000610743 MRC2Q9UBG0 1479 aa24.06■■□□□ 1.44
SPPL2B-207ENST00000610743 SCAF1Q9H7N4 1312 aaKnown RBP24■■□□□ 1.43
SPPL2B-207ENST00000610743 TARBP1Q13395 1621 aaKnown RBP24■■□□□ 1.43
SPPL2B-207ENST00000610743 ABCA5Q8WWZ7 1642 aa23.98■■□□□ 1.43
SPPL2B-207ENST00000610743 WDR62O43379 1518 aa23.96■■□□□ 1.43
SPPL2B-207ENST00000610743 CLIP1P30622 1438 aa23.95■■□□□ 1.42
SPPL2B-207ENST00000610743 CARMIL1Q5VZK9 1371 aa23.94■■□□□ 1.42
SPPL2B-207ENST00000610743 THOC2Q8NI27 1593 aaKnown RBP23.91■■□□□ 1.42
SPPL2B-207ENST00000610743 ERCC6Q03468 1493 aa23.9■■□□□ 1.42
SPPL2B-207ENST00000610743 CUL7Q14999 1698 aa23.9■■□□□ 1.42
SPPL2B-207ENST00000610743 TDRD9Q8NDG6 1382 aaKnown RBP23.89■■□□□ 1.42
SPPL2B-207ENST00000610743 GAPVD1Q14C86 1478 aa23.86■■□□□ 1.41
SPPL2B-207ENST00000610743 PBRM1Q86U86 1689 aa23.81■■□□□ 1.4
SPPL2B-207ENST00000610743 RANGAP1P46060 587 aaPredicted RBP23.81■■□□□ 1.4
SPPL2B-207ENST00000610743 IFT140Q96RY7 1462 aa23.77■■□□□ 1.4
SPPL2B-207ENST00000610743 VPS8Q8N3P4 1428 aa23.76■■□□□ 1.39
SPPL2B-207ENST00000610743 ARAP1Q96P48 1450 aa23.76■■□□□ 1.39
SPPL2B-207ENST00000610743 AQRO60306 1485 aaKnown RBP eCLIP23.74■■□□□ 1.394e-7■■■■■ 43.1
SPPL2B-207ENST00000610743 ZNF608Q9ULD9 1512 aaPredicted RBP23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms