RNA–Protein interactions for RNA: ENST00000393308.5

RAB43-205, Transcript of RAB43, member RAS oncogene family, humanhuman

APPRIS P1 TSL 4 BASIC

Gene RAB43, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43-205ENST00000393308 NISCHQ9Y2I1 1504 aa24.96■■□□□ 1.59
RAB43-205ENST00000393308 DCAF8L2P0C7V8 631 aa22.88■■□□□ 1.25
RAB43-205ENST00000393308 ABCC9O60706 1549 aa22.02■■□□□ 1.12
RAB43-205ENST00000393308 CCDC180Q9P1Z9 1646 aa21.51■■□□□ 1.03
RAB43-205ENST00000393308 SHROOM4Q9ULL8 1493 aa21.25■□□□□ 0.99
RAB43-205ENST00000393308 PABPN1Q86U42 306 aaKnown RBP eCLIP21.08■□□□□ 0.97
RAB43-205ENST00000393308 SUPT5HO00267 1087 aaKnown RBP20.95■□□□□ 0.94
RAB43-205ENST00000393308 ZCCHC6Q5VYS8 1495 aaKnown RBP20.9■□□□□ 0.94
RAB43-205ENST00000393308 RB1CC1Q8TDY2 1594 aa20.75■□□□□ 0.91
RAB43-205ENST00000393308 NACADO15069 1562 aa20.62■□□□□ 0.89
RAB43-205ENST00000393308 MYO15BQ96JP2 1530 aa20.56■□□□□ 0.88
RAB43-205ENST00000393308 CHIC1Q5VXU3 224 aa20.52■□□□□ 0.88
RAB43-205ENST00000393308 SCRIBQ14160 1630 aa20.43■□□□□ 0.86
RAB43-205ENST00000393308 HRCP23327 699 aa20.37■□□□□ 0.85
RAB43-205ENST00000393308 DCAF1Q9Y4B6 1507 aa20.2■□□□□ 0.82
RAB43-205ENST00000393308 PCGF6Q9BYE7 350 aa20.17■□□□□ 0.82
RAB43-205ENST00000393308 PELP1Q8IZL8 1130 aaKnown RBP20.04■□□□□ 0.8
RAB43-205ENST00000393308 MYT1Q01538 1121 aa20■□□□□ 0.79
RAB43-205ENST00000393308 LOC105371045A0A1W2PR82 267 aa19.95■□□□□ 0.78
RAB43-205ENST00000393308 PPARGC1BQ86YN6 1023 aaKnown RBP19.95■□□□□ 0.78
RAB43-205ENST00000393308 DNAJC5BQ9UF47 199 aa19.73■□□□□ 0.75
RAB43-205ENST00000393308 TRIM26Q12899 539 aaPredicted RBP19.7■□□□□ 0.74
RAB43-205ENST00000393308 RSF1Q96T23 1441 aaPredicted RBP19.62■□□□□ 0.73
RAB43-205ENST00000393308 CECR2Q9BXF3 1484 aa19.61■□□□□ 0.73
RAB43-205ENST00000393308 BICRAQ9NZM4 1560 aa19.5■□□□□ 0.71
RAB43-205ENST00000393308 TRIM41Q8WV44 630 aa19.47■□□□□ 0.71
RAB43-205ENST00000393308 BAZ1BQ9UIG0 1483 aaKnown RBP19.46■□□□□ 0.71
RAB43-205ENST00000393308 BAZ1AQ9NRL2 1556 aaPredicted RBP19.45■□□□□ 0.7
RAB43-205ENST00000393308 EIF4G1Q04637 1599 aaKnown RBP19.42■□□□□ 0.7
RAB43-205ENST00000393308 ZEB1P37275 1124 aaPredicted RBP19.35■□□□□ 0.69
RAB43-205ENST00000393308 FAM9AQ8IZU1 332 aaPredicted RBP19.35■□□□□ 0.69
RAB43-205ENST00000393308 UNC13AQ9UPW8 1703 aa19.34■□□□□ 0.69
RAB43-205ENST00000393308 MROH2BQ7Z745 1585 aa19.3■□□□□ 0.68
RAB43-205ENST00000393308 ERCC6Q03468 1493 aa19.29■□□□□ 0.68
RAB43-205ENST00000393308 CC2D2AQ9P2K1 1620 aa19.29■□□□□ 0.68
RAB43-205ENST00000393308 SMARCA2P51531 1590 aa19.28■□□□□ 0.68
RAB43-205ENST00000393308 ATAD2BQ9ULI0 1458 aa19.26■□□□□ 0.67
RAB43-205ENST00000393308 EHMT2Q96KQ7 1210 aa19.25■□□□□ 0.67
RAB43-205ENST00000393308 SLC24A1O60721 1099 aa19.21■□□□□ 0.67
RAB43-205ENST00000393308 SMARCA4P51532 1647 aa19.16■□□□□ 0.66
RAB43-205ENST00000393308 NCAPD3P42695 1498 aa19.11■□□□□ 0.65
RAB43-205ENST00000393308 FBLN2P98095 1184 aa19.11■□□□□ 0.65
RAB43-205ENST00000393308 WIZO95785 1651 aa19.1■□□□□ 0.65
RAB43-205ENST00000393308 PDS5BQ9NTI5 1447 aa19.01■□□□□ 0.63
RAB43-205ENST00000393308 SCAF1Q9H7N4 1312 aaKnown RBP18.98■□□□□ 0.63
RAB43-205ENST00000393308 CADPSQ9ULU8 1353 aa18.98■□□□□ 0.63
RAB43-205ENST00000393308 ERICH6Q7L0X2 663 aa18.97■□□□□ 0.63
RAB43-205ENST00000393308 RANGAP1P46060 587 aaPredicted RBP18.95■□□□□ 0.62
RAB43-205ENST00000393308 TTBK1Q5TCY1 1321 aaPredicted RBP18.93■□□□□ 0.62
RAB43-205ENST00000393308 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.89■□□□□ 0.61
RAB43-205ENST00000393308 CCDC88BA6NC98 1476 aa18.86■□□□□ 0.61
RAB43-205ENST00000393308 TOP2AP11388 1531 aaKnown RBP18.83■□□□□ 0.6
RAB43-205ENST00000393308 CCER1Q8TC90 406 aaPredicted RBP18.82■□□□□ 0.6
RAB43-205ENST00000393308 NESP48681 1621 aa18.81■□□□□ 0.6
RAB43-205ENST00000393308 HMGXB3Q12766 1538 aa18.79■□□□□ 0.6
RAB43-205ENST00000393308 ABCC8Q09428 1581 aa18.79■□□□□ 0.6
RAB43-205ENST00000393308 UBTFP17480 764 aaKnown RBP18.78■□□□□ 0.6
RAB43-205ENST00000393308 WRNQ14191 1432 aaPredicted RBP eCLIP18.75■□□□□ 0.59
RAB43-205ENST00000393308 PRKCSHP14314 528 aaPredicted RBP18.72■□□□□ 0.59
RAB43-205ENST00000393308 CEP164Q9UPV0 1460 aa18.72■□□□□ 0.59
RAB43-205ENST00000393308 CHMP7Q8WUX9 453 aaPredicted RBP18.71■□□□□ 0.59
RAB43-205ENST00000393308 FANCD2Q9BXW9 1451 aa18.71■□□□□ 0.59
RAB43-205ENST00000393308 CEP162Q5TB80 1403 aa18.7■□□□□ 0.58
RAB43-205ENST00000393308 ATP1B4Q9UN42 357 aaPredicted RBP18.68■□□□□ 0.58
RAB43-205ENST00000393308 SOGA1O94964 1423 aa18.67■□□□□ 0.58
RAB43-205ENST00000393308 ACIN1Q9UKV3 1341 aaKnown RBP18.67■□□□□ 0.58
RAB43-205ENST00000393308 NEUROD1Q13562 356 aa18.64■□□□□ 0.58
RAB43-205ENST00000393308 TNIKQ9UKE5 1360 aa18.64■□□□□ 0.57
RAB43-205ENST00000393308 DIEXFQ68CQ4 756 aaKnown RBP18.62■□□□□ 0.57
RAB43-205ENST00000393308 RUSC2Q8N2Y8 1516 aa18.58■□□□□ 0.57
RAB43-205ENST00000393308 CSRNP3Q8WYN3 585 aa18.55■□□□□ 0.56
RAB43-205ENST00000393308 EEA1Q15075 1411 aa18.55■□□□□ 0.56
RAB43-205ENST00000393308 PEG3Q9GZU2 1588 aa18.53■□□□□ 0.56
RAB43-205ENST00000393308 CFTRP13569 1480 aa18.53■□□□□ 0.56
RAB43-205ENST00000393308 TDRD9Q8NDG6 1382 aaKnown RBP18.52■□□□□ 0.56
RAB43-205ENST00000393308 HNRNPUL2Q1KMD3 747 aaKnown RBP18.52■□□□□ 0.56
RAB43-205ENST00000393308 LAMC3Q9Y6N6 1575 aa18.48■□□□□ 0.55
RAB43-205ENST00000393308 GOLGA3Q08378 1498 aa18.47■□□□□ 0.55
RAB43-205ENST00000393308 GTF3C3Q9Y5Q9 886 aa18.47■□□□□ 0.55
RAB43-205ENST00000393308 CENPBP07199 599 aaPredicted RBP18.46■□□□□ 0.55
RAB43-205ENST00000393308 APLP2Q06481 763 aa18.46■□□□□ 0.55
RAB43-205ENST00000393308 MRC2Q9UBG0 1479 aa18.46■□□□□ 0.55
RAB43-205ENST00000393308 ZNF316A6NFI3 1004 aaPredicted RBP18.41■□□□□ 0.54
RAB43-205ENST00000393308 OSCARQ8IYS5 282 aa18.4■□□□□ 0.54
RAB43-205ENST00000393308 CUX2O14529 1486 aa18.36■□□□□ 0.53
RAB43-205ENST00000393308 P3H3Q8IVL6 736 aa18.34■□□□□ 0.53
RAB43-205ENST00000393308 SYNJ1O43426 1573 aa18.33■□□□□ 0.53
RAB43-205ENST00000393308 NPM1P06748 294 aaKnown RBP eCLIP18.33■□□□□ 0.52
RAB43-205ENST00000393308 KIF21BO75037 1637 aa18.32■□□□□ 0.52
RAB43-205ENST00000393308 KIF27Q86VH2 1401 aa18.31■□□□□ 0.52
RAB43-205ENST00000393308 CLIP1P30622 1438 aa18.28■□□□□ 0.52
RAB43-205ENST00000393308 RAD54L2Q9Y4B4 1467 aa18.27■□□□□ 0.52
RAB43-205ENST00000393308 AQRO60306 1485 aaKnown RBP eCLIP18.25■□□□□ 0.513e-6■■□□□ 13.8
RAB43-205ENST00000393308 ARID3CA6NKF2 412 aa18.25■□□□□ 0.51
RAB43-205ENST00000393308 FGD5Q6ZNL6 1462 aa18.24■□□□□ 0.51
RAB43-205ENST00000393308 VPS8Q8N3P4 1428 aa18.24■□□□□ 0.51
RAB43-205ENST00000393308 TOPBP1Q92547 1522 aa18.23■□□□□ 0.51
RAB43-205ENST00000393308 MIER1Q8N108 512 aa18.21■□□□□ 0.51
RAB43-205ENST00000393308 YTHDC1Q96MU7 727 aaKnown RBP18.21■□□□□ 0.51
RAB43-205ENST00000393308 RAPGEF2Q9Y4G8 1499 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms