RNA–Protein interactions for RNA: ENST00000476465.5

RAB43-207, Transcript of RAB43, member RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAB43, Length 1,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43-207ENST00000476465 NISCHQ9Y2I1 1504 aa67.74■■■■■ 8.44
RAB43-207ENST00000476465 CCDC180Q9P1Z9 1646 aa59.54■■■■■ 7.12
RAB43-207ENST00000476465 ABCC9O60706 1549 aa57.06■■■■■ 6.73
RAB43-207ENST00000476465 ZCCHC6Q5VYS8 1495 aaKnown RBP56.69■■■■■ 6.67
RAB43-207ENST00000476465 DCAF8L2P0C7V8 631 aa56.13■■■■■ 6.58
RAB43-207ENST00000476465 DCAF1Q9Y4B6 1507 aa56.11■■■■■ 6.57
RAB43-207ENST00000476465 MYO15BQ96JP2 1530 aa55.86■■■■■ 6.53
RAB43-207ENST00000476465 NACADO15069 1562 aa55.73■■■■■ 6.51
RAB43-207ENST00000476465 RB1CC1Q8TDY2 1594 aa55.44■■■■■ 6.47
RAB43-207ENST00000476465 SCRIBQ14160 1630 aa54.47■■■■■ 6.31
RAB43-207ENST00000476465 SHROOM4Q9ULL8 1493 aa54.35■■■■■ 6.29
RAB43-207ENST00000476465 UNC13AQ9UPW8 1703 aa54.14■■■■■ 6.26
RAB43-207ENST00000476465 BICRAQ9NZM4 1560 aa53.74■■■■■ 6.19
RAB43-207ENST00000476465 PABPN1Q86U42 306 aaKnown RBP eCLIP53.62■■■■■ 6.17
RAB43-207ENST00000476465 CECR2Q9BXF3 1484 aa52.64■■■■■ 6.02
RAB43-207ENST00000476465 BAZ1AQ9NRL2 1556 aaPredicted RBP52.39■■■■■ 5.98
RAB43-207ENST00000476465 MROH2BQ7Z745 1585 aa52.24■■■■■ 5.95
RAB43-207ENST00000476465 SMARCA4P51532 1647 aa52.24■■■■■ 5.95
RAB43-207ENST00000476465 EIF4G1Q04637 1599 aaKnown RBP52.21■■■■■ 5.95
RAB43-207ENST00000476465 RSF1Q96T23 1441 aaPredicted RBP52.16■■■■■ 5.94
RAB43-207ENST00000476465 SUPT5HO00267 1087 aaKnown RBP51.87■■■■■ 5.89
RAB43-207ENST00000476465 PEG3Q9GZU2 1588 aa51.73■■■■■ 5.87
RAB43-207ENST00000476465 WIZO95785 1651 aa51.7■■■■■ 5.87
RAB43-207ENST00000476465 ATAD2BQ9ULI0 1458 aa51.67■■■■■ 5.86
RAB43-207ENST00000476465 CC2D2AQ9P2K1 1620 aa51.65■■■■■ 5.86
RAB43-207ENST00000476465 SMARCA2P51531 1590 aa51.64■■■■■ 5.86
RAB43-207ENST00000476465 NCAPD3P42695 1498 aa51.46■■■■■ 5.83
RAB43-207ENST00000476465 BAZ1BQ9UIG0 1483 aaKnown RBP51.29■■■■■ 5.8
RAB43-207ENST00000476465 HMGXB3Q12766 1538 aa51.27■■■■■ 5.8
RAB43-207ENST00000476465 DNAJC5BQ9UF47 199 aa51.25■■■■■ 5.79
RAB43-207ENST00000476465 TOP2AP11388 1531 aaKnown RBP51.24■■■■■ 5.79
RAB43-207ENST00000476465 CCDC88BA6NC98 1476 aa50.68■■■■■ 5.7
RAB43-207ENST00000476465 CADPSQ9ULU8 1353 aa50.05■■■■■ 5.6
RAB43-207ENST00000476465 CFTRP13569 1480 aa50.01■■■■■ 5.6
RAB43-207ENST00000476465 LAMC3Q9Y6N6 1575 aa49.83■■■■■ 5.57
RAB43-207ENST00000476465 NESP48681 1621 aa49.79■■■■■ 5.56
RAB43-207ENST00000476465 PRDM2Q13029 1718 aa49.59■■■■■ 5.53
RAB43-207ENST00000476465 PDS5BQ9NTI5 1447 aa49.5■■■■■ 5.51
RAB43-207ENST00000476465 FANCD2Q9BXW9 1451 aa49.43■■■■■ 5.5
RAB43-207ENST00000476465 CHIC1Q5VXU3 224 aa49.23■■■■■ 5.47
RAB43-207ENST00000476465 CEP164Q9UPV0 1460 aa49.22■■■■■ 5.47
RAB43-207ENST00000476465 ABCC8Q09428 1581 aa49.2■■■■■ 5.47
RAB43-207ENST00000476465 KIF21AQ7Z4S6 1674 aa49.15■■■■■ 5.46
RAB43-207ENST00000476465 WRNQ14191 1432 aaPredicted RBP eCLIP49.12■■■■■ 5.45
RAB43-207ENST00000476465 ERCC6Q03468 1493 aa49.07■■■■■ 5.45
RAB43-207ENST00000476465 TRIM41Q8WV44 630 aa48.94■■■■■ 5.43
RAB43-207ENST00000476465 CUX1P39880 1505 aa48.91■■■■■ 5.42
RAB43-207ENST00000476465 SYNJ1O43426 1573 aa48.88■■■■■ 5.42
RAB43-207ENST00000476465 MRC2Q9UBG0 1479 aa48.87■■■■■ 5.41
RAB43-207ENST00000476465 URB2Q14146 1524 aaKnown RBP48.85■■■■■ 5.41
RAB43-207ENST00000476465 TOP2BQ02880 1626 aa48.83■■■■■ 5.41
RAB43-207ENST00000476465 DNMBPQ6XZF7 1577 aa48.81■■■■■ 5.4
RAB43-207ENST00000476465 BIVM-ERCC5R4GMW8 1640 aa48.78■■■■■ 5.4
RAB43-207ENST00000476465 TOPBP1Q92547 1522 aa48.78■■■■■ 5.4
RAB43-207ENST00000476465 THOC2Q8NI27 1593 aaKnown RBP48.67■■■■■ 5.38
RAB43-207ENST00000476465 WDR62O43379 1518 aa48.65■■■■■ 5.38
RAB43-207ENST00000476465 FGD5Q6ZNL6 1462 aa48.53■■■■■ 5.36
RAB43-207ENST00000476465 POLA1P09884 1462 aaPredicted RBP48.47■■■■■ 5.35
RAB43-207ENST00000476465 SOGA1O94964 1423 aa48.33■■■■■ 5.33
RAB43-207ENST00000476465 CUX2O14529 1486 aa48.27■■■■■ 5.32
RAB43-207ENST00000476465 RAD54L2Q9Y4B4 1467 aa48.26■■■■■ 5.32
RAB43-207ENST00000476465 IFT140Q96RY7 1462 aa48.15■■■■■ 5.3
RAB43-207ENST00000476465 ABCA10Q8WWZ4 1543 aa48.15■■■■■ 5.3
RAB43-207ENST00000476465 TARBP1Q13395 1621 aaKnown RBP48.13■■■■■ 5.3
RAB43-207ENST00000476465 KIF27Q86VH2 1401 aa48■■■■■ 5.27
RAB43-207ENST00000476465 WDR97A6NE52 1622 aa47.99■■■■■ 5.27
RAB43-207ENST00000476465 RUSC2Q8N2Y8 1516 aa47.98■■■■■ 5.27
RAB43-207ENST00000476465 EEA1Q15075 1411 aa47.97■■■■■ 5.27
RAB43-207ENST00000476465 TDRD9Q8NDG6 1382 aaKnown RBP47.9■■■■■ 5.26
RAB43-207ENST00000476465 FAM9AQ8IZU1 332 aaPredicted RBP47.88■■■■■ 5.25
RAB43-207ENST00000476465 ZNF608Q9ULD9 1512 aaPredicted RBP47.82■■■■■ 5.25
RAB43-207ENST00000476465 ABCA5Q8WWZ7 1642 aa47.78■■■■■ 5.24
RAB43-207ENST00000476465 GAPVD1Q14C86 1478 aa47.77■■■■■ 5.24
RAB43-207ENST00000476465 CSRNP3Q8WYN3 585 aa47.77■■■■■ 5.24
RAB43-207ENST00000476465 AQRO60306 1485 aaKnown RBP eCLIP47.75■■■■■ 5.243e-6■■□□□ 13.8
RAB43-207ENST00000476465 IGF1RP08069 1367 aa47.68■■■■■ 5.22
RAB43-207ENST00000476465 EIF4G3O43432 1585 aaKnown RBP47.63■■■■■ 5.22
RAB43-207ENST00000476465 ERICH3Q5RHP9 1530 aa47.58■■■■■ 5.21
RAB43-207ENST00000476465 GRIN2BQ13224 1484 aa47.57■■■■■ 5.21
RAB43-207ENST00000476465 PBRM1Q86U86 1689 aa47.48■■■■■ 5.19
RAB43-207ENST00000476465 PRXQ9BXM0 1461 aa47.43■■■■■ 5.18
RAB43-207ENST00000476465 CARMIL1Q5VZK9 1371 aa47.41■■■■■ 5.18
RAB43-207ENST00000476465 CUL7Q14999 1698 aa47.36■■■■■ 5.17
RAB43-207ENST00000476465 KIF21BO75037 1637 aa47.31■■■■■ 5.16
RAB43-207ENST00000476465 SNAPC4Q5SXM2 1469 aa47.31■■■■■ 5.16
RAB43-207ENST00000476465 MAGI1Q96QZ7 1491 aaPredicted RBP47.29■■■■■ 5.16
RAB43-207ENST00000476465 FHAD1B1AJZ9 1412 aa47.27■■■■■ 5.16
RAB43-207ENST00000476465 RAPGEF2Q9Y4G8 1499 aa47.25■■■■■ 5.15
RAB43-207ENST00000476465 ADAMTS12P58397 1594 aa47.22■■■■■ 5.15
RAB43-207ENST00000476465 LOC105371045A0A1W2PR82 267 aa47.22■■■■■ 5.15
RAB43-207ENST00000476465 GOLGA3Q08378 1498 aa47.18■■■■■ 5.14
RAB43-207ENST00000476465 EHMT2Q96KQ7 1210 aa47.14■■■■■ 5.14
RAB43-207ENST00000476465 SYNJ2O15056 1496 aa47.1■■■■■ 5.13
RAB43-207ENST00000476465 CHMP7Q8WUX9 453 aaPredicted RBP47.03■■■■■ 5.12
RAB43-207ENST00000476465 UBTFP17480 764 aaKnown RBP47■■■■■ 5.11
RAB43-207ENST00000476465 GRIN2AQ12879 1464 aa46.95■■■■■ 5.11
RAB43-207ENST00000476465 FBLN2P98095 1184 aa46.94■■■■■ 5.11
RAB43-207ENST00000476465 TNIKQ9UKE5 1360 aa46.88■■■■■ 5.1
RAB43-207ENST00000476465 CHD1O14646 1710 aa46.75■■■■■ 5.07
RAB43-207ENST00000476465 NUP160Q12769 1436 aa46.71■■■■■ 5.07
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms