RNA–Protein interactions for RNA: ENST00000477335.5

PGK1-204, Transcript of phosphoglycerate kinase 1, humanhuman

TSL 3

Gene PGK1, Length 353 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-204ENST00000477335 NISCHQ9Y2I1 1504 aa21.96■■□□□ 1.11
PGK1-204ENST00000477335 AEBP2Q6ZN18 517 aaPredicted RBP20.77■□□□□ 0.92
PGK1-204ENST00000477335 CHIC1Q5VXU3 224 aa20.12■□□□□ 0.81
PGK1-204ENST00000477335 CCDC180Q9P1Z9 1646 aa19.28■□□□□ 0.68
PGK1-204ENST00000477335 ABCC9O60706 1549 aa18.55■□□□□ 0.56
PGK1-204ENST00000477335 ZCCHC6Q5VYS8 1495 aaKnown RBP18.4■□□□□ 0.54
PGK1-204ENST00000477335 DCAF1Q9Y4B6 1507 aa18.14■□□□□ 0.49
PGK1-204ENST00000477335 DCAF8L2P0C7V8 631 aa18.13■□□□□ 0.49
PGK1-204ENST00000477335 MYO15BQ96JP2 1530 aa18.04■□□□□ 0.48
PGK1-204ENST00000477335 NACADO15069 1562 aa18.03■□□□□ 0.48
PGK1-204ENST00000477335 RB1CC1Q8TDY2 1594 aa17.94■□□□□ 0.46
PGK1-204ENST00000477335 PHF23Q9BUL5 403 aaPredicted RBP17.79■□□□□ 0.44
PGK1-204ENST00000477335 SCRIBQ14160 1630 aa17.71■□□□□ 0.43
PGK1-204ENST00000477335 SHROOM4Q9ULL8 1493 aa17.66■□□□□ 0.42
PGK1-204ENST00000477335 UNC13AQ9UPW8 1703 aa17.61■□□□□ 0.41
PGK1-204ENST00000477335 BICRAQ9NZM4 1560 aa17.5■□□□□ 0.39
PGK1-204ENST00000477335 SENP3Q9H4L4 574 aaPredicted RBP17.45■□□□□ 0.38
PGK1-204ENST00000477335 PABPN1Q86U42 306 aaKnown RBP eCLIP17.43■□□□□ 0.38
PGK1-204ENST00000477335 CECR2Q9BXF3 1484 aa17.13■□□□□ 0.33
PGK1-204ENST00000477335 MROH2BQ7Z745 1585 aa16.98■□□□□ 0.31
PGK1-204ENST00000477335 SMARCA4P51532 1647 aa16.96■□□□□ 0.3
PGK1-204ENST00000477335 EIF4G1Q04637 1599 aaKnown RBP16.95■□□□□ 0.3
PGK1-204ENST00000477335 BAZ1AQ9NRL2 1556 aaPredicted RBP16.94■□□□□ 0.3
PGK1-204ENST00000477335 RSF1Q96T23 1441 aaPredicted RBP16.92■□□□□ 0.3
PGK1-204ENST00000477335 WIZO95785 1651 aa16.8■□□□□ 0.28
PGK1-204ENST00000477335 CC2D2AQ9P2K1 1620 aa16.78■□□□□ 0.28
PGK1-204ENST00000477335 SUPT5HO00267 1087 aaKnown RBP16.77■□□□□ 0.28
PGK1-204ENST00000477335 ATAD2BQ9ULI0 1458 aa16.76■□□□□ 0.27
PGK1-204ENST00000477335 PEG3Q9GZU2 1588 aa16.76■□□□□ 0.27
PGK1-204ENST00000477335 DNAJC5BQ9UF47 199 aa16.73■□□□□ 0.27
PGK1-204ENST00000477335 SMARCA2P51531 1590 aa16.7■□□□□ 0.26
PGK1-204ENST00000477335 NCAPD3P42695 1498 aa16.67■□□□□ 0.26
PGK1-204ENST00000477335 TOP2AP11388 1531 aaKnown RBP16.61■□□□□ 0.25
PGK1-204ENST00000477335 BAZ1BQ9UIG0 1483 aaKnown RBP16.61■□□□□ 0.25
PGK1-204ENST00000477335 HMGXB3Q12766 1538 aa16.6■□□□□ 0.25
PGK1-204ENST00000477335 CCDC88BA6NC98 1476 aa16.44■□□□□ 0.22
PGK1-204ENST00000477335 FOXD1Q16676 465 aa16.32■□□□□ 0.2
PGK1-204ENST00000477335 PLPPR3Q6T4P5 718 aa16.24■□□□□ 0.19
PGK1-204ENST00000477335 NESP48681 1621 aa16.22■□□□□ 0.19
PGK1-204ENST00000477335 CFTRP13569 1480 aa16.21■□□□□ 0.19
PGK1-204ENST00000477335 CADPSQ9ULU8 1353 aa16.2■□□□□ 0.18
PGK1-204ENST00000477335 LAMC3Q9Y6N6 1575 aa16.13■□□□□ 0.17
PGK1-204ENST00000477335 PRDM2Q13029 1718 aa16.06■□□□□ 0.16
PGK1-204ENST00000477335 FANCD2Q9BXW9 1451 aa16.03■□□□□ 0.16
PGK1-204ENST00000477335 ABCC8Q09428 1581 aa15.99■□□□□ 0.15
PGK1-204ENST00000477335 KIF21AQ7Z4S6 1674 aa15.99■□□□□ 0.15
PGK1-204ENST00000477335 PDS5BQ9NTI5 1447 aa15.98■□□□□ 0.15
PGK1-204ENST00000477335 CEP164Q9UPV0 1460 aa15.94■□□□□ 0.14
PGK1-204ENST00000477335 CUX1P39880 1505 aa15.9■□□□□ 0.14
PGK1-204ENST00000477335 SYNJ1O43426 1573 aa15.89■□□□□ 0.13
PGK1-204ENST00000477335 WRNQ14191 1432 aaPredicted RBP eCLIP15.89■□□□□ 0.13
PGK1-204ENST00000477335 ERCC6Q03468 1493 aa15.89■□□□□ 0.13
PGK1-204ENST00000477335 URB2Q14146 1524 aaKnown RBP15.89■□□□□ 0.13
PGK1-204ENST00000477335 MRC2Q9UBG0 1479 aa15.85■□□□□ 0.13
PGK1-204ENST00000477335 THOC2Q8NI27 1593 aaKnown RBP15.84■□□□□ 0.13
PGK1-204ENST00000477335 TOPBP1Q92547 1522 aa15.83■□□□□ 0.12
PGK1-204ENST00000477335 DNMBPQ6XZF7 1577 aa15.82■□□□□ 0.12
PGK1-204ENST00000477335 TOP2BQ02880 1626 aa15.82■□□□□ 0.12
PGK1-204ENST00000477335 BIVM-ERCC5R4GMW8 1640 aa15.82■□□□□ 0.12
PGK1-204ENST00000477335 WDR62O43379 1518 aa15.79■□□□□ 0.12
PGK1-204ENST00000477335 TRIM41Q8WV44 630 aa15.76■□□□□ 0.11
PGK1-204ENST00000477335 FGD5Q6ZNL6 1462 aa15.75■□□□□ 0.11
PGK1-204ENST00000477335 POLA1P09884 1462 aaPredicted RBP15.73■□□□□ 0.11
PGK1-204ENST00000477335 PPP6R1Q9UPN7 881 aa15.73■□□□□ 0.11
PGK1-204ENST00000477335 ADRA2BP18089 450 aa15.7■□□□□ 0.1
PGK1-204ENST00000477335 CUX2O14529 1486 aa15.7■□□□□ 0.1
PGK1-204ENST00000477335 RAD54L2Q9Y4B4 1467 aa15.69■□□□□ 0.1
PGK1-204ENST00000477335 SOGA1O94964 1423 aa15.64■□□□□ 0.09
PGK1-204ENST00000477335 TARBP1Q13395 1621 aaKnown RBP15.64■□□□□ 0.09
PGK1-204ENST00000477335 RUSC2Q8N2Y8 1516 aa15.62■□□□□ 0.09
PGK1-204ENST00000477335 WDR97A6NE52 1622 aa15.61■□□□□ 0.09
PGK1-204ENST00000477335 ABCA10Q8WWZ4 1543 aa15.59■□□□□ 0.09
PGK1-204ENST00000477335 IFT140Q96RY7 1462 aa15.59■□□□□ 0.09
PGK1-204ENST00000477335 ZNF608Q9ULD9 1512 aaPredicted RBP15.57■□□□□ 0.08
PGK1-204ENST00000477335 TDRD9Q8NDG6 1382 aaKnown RBP15.53■□□□□ 0.08
PGK1-204ENST00000477335 ABCA5Q8WWZ7 1642 aa15.52■□□□□ 0.08
PGK1-204ENST00000477335 FAM9AQ8IZU1 332 aaPredicted RBP15.51■□□□□ 0.07
PGK1-204ENST00000477335 AQRO60306 1485 aaKnown RBP eCLIP15.51■□□□□ 0.075e-17■■■■□ 23.7
PGK1-204ENST00000477335 KIF27Q86VH2 1401 aa15.5■□□□□ 0.07
PGK1-204ENST00000477335 EIF4G3O43432 1585 aaKnown RBP15.48■□□□□ 0.07
PGK1-204ENST00000477335 GAPVD1Q14C86 1478 aa15.46■□□□□ 0.07
PGK1-204ENST00000477335 EEA1Q15075 1411 aa15.44■□□□□ 0.06
PGK1-204ENST00000477335 IGF1RP08069 1367 aa15.44■□□□□ 0.06
PGK1-204ENST00000477335 PBRM1Q86U86 1689 aa15.41■□□□□ 0.06
PGK1-204ENST00000477335 CSRNP3Q8WYN3 585 aa15.4■□□□□ 0.06
PGK1-204ENST00000477335 GRIN2BQ13224 1484 aa15.4■□□□□ 0.06
PGK1-204ENST00000477335 ERICH3Q5RHP9 1530 aa15.38■□□□□ 0.05
PGK1-204ENST00000477335 SNAPC4Q5SXM2 1469 aa15.37■□□□□ 0.05
PGK1-204ENST00000477335 PRXQ9BXM0 1461 aa15.36■□□□□ 0.05
PGK1-204ENST00000477335 PIAS4Q8N2W9 510 aaPredicted RBP15.35■□□□□ 0.05
PGK1-204ENST00000477335 ADAMTS12P58397 1594 aa15.34■□□□□ 0.05
PGK1-204ENST00000477335 CARMIL1Q5VZK9 1371 aa15.33■□□□□ 0.04
PGK1-204ENST00000477335 RAPGEF2Q9Y4G8 1499 aa15.32■□□□□ 0.04
PGK1-204ENST00000477335 CUL7Q14999 1698 aa15.32■□□□□ 0.04
PGK1-204ENST00000477335 KIF21BO75037 1637 aa15.31■□□□□ 0.04
PGK1-204ENST00000477335 LOC105371045A0A1W2PR82 267 aa15.3■□□□□ 0.04
PGK1-204ENST00000477335 EHMT2Q96KQ7 1210 aa15.3■□□□□ 0.04
PGK1-204ENST00000477335 MAGI1Q96QZ7 1491 aaPredicted RBP15.3■□□□□ 0.04
PGK1-204ENST00000477335 FHAD1B1AJZ9 1412 aa15.29■□□□□ 0.04
PGK1-204ENST00000477335 SYNJ2O15056 1496 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms