RNA–Protein interactions for RNA: ENST00000488745.5

SNHG12-211, Transcript of small nucleolar RNA host gene 12, humanhuman

TSL 1 (best) BASIC

Gene SNHG12, Length 1,365 nt, Biotype antisense RNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG12-211ENST00000488745 NISCHQ9Y2I1 1504 aa20.04■□□□□ 0.8
SNHG12-211ENST00000488745 CCDC180Q9P1Z9 1646 aa17.66■□□□□ 0.42
SNHG12-211ENST00000488745 PELP1Q8IZL8 1130 aaKnown RBP17.33■□□□□ 0.36
SNHG12-211ENST00000488745 AEBP2Q6ZN18 517 aaPredicted RBP17.2■□□□□ 0.34
SNHG12-211ENST00000488745 MYT1Q01538 1121 aa17.16■□□□□ 0.34
SNHG12-211ENST00000488745 ABCC9O60706 1549 aa16.92■□□□□ 0.3
SNHG12-211ENST00000488745 ZCCHC6Q5VYS8 1495 aaKnown RBP16.77■□□□□ 0.27
SNHG12-211ENST00000488745 DCAF8L2P0C7V8 631 aa16.66■□□□□ 0.26
SNHG12-211ENST00000488745 DCAF1Q9Y4B6 1507 aa16.6■□□□□ 0.25
SNHG12-211ENST00000488745 MYO15BQ96JP2 1530 aa16.53■□□□□ 0.24
SNHG12-211ENST00000488745 NACADO15069 1562 aa16.51■□□□□ 0.23
SNHG12-211ENST00000488745 TTBK1Q5TCY1 1321 aaPredicted RBP16.49■□□□□ 0.23
SNHG12-211ENST00000488745 RB1CC1Q8TDY2 1594 aa16.45■□□□□ 0.22
SNHG12-211ENST00000488745 SCRIBQ14160 1630 aa16.15■□□□□ 0.18
SNHG12-211ENST00000488745 HRCP23327 699 aa16.1■□□□□ 0.17
SNHG12-211ENST00000488745 SHROOM4Q9ULL8 1493 aa16.09■□□□□ 0.17
SNHG12-211ENST00000488745 UNC13AQ9UPW8 1703 aa16.07■□□□□ 0.16
SNHG12-211ENST00000488745 BICRAQ9NZM4 1560 aa15.91■□□□□ 0.14
SNHG12-211ENST00000488745 PABPN1Q86U42 306 aaKnown RBP eCLIP15.89■□□□□ 0.13
SNHG12-211ENST00000488745 CHIC1Q5VXU3 224 aa15.86■□□□□ 0.13
SNHG12-211ENST00000488745 CECR2Q9BXF3 1484 aa15.57■□□□□ 0.08
SNHG12-211ENST00000488745 BAZ1AQ9NRL2 1556 aaPredicted RBP15.52■□□□□ 0.08
SNHG12-211ENST00000488745 SMARCA4P51532 1647 aa15.48■□□□□ 0.07
SNHG12-211ENST00000488745 EIF4G1Q04637 1599 aaKnown RBP15.47■□□□□ 0.07
SNHG12-211ENST00000488745 MROH2BQ7Z745 1585 aa15.45■□□□□ 0.06
SNHG12-211ENST00000488745 ERICH6Q7L0X2 663 aa15.42■□□□□ 0.06
SNHG12-211ENST00000488745 RSF1Q96T23 1441 aaPredicted RBP15.42■□□□□ 0.06
SNHG12-211ENST00000488745 SCAF1Q9H7N4 1312 aaKnown RBP15.41■□□□□ 0.06
SNHG12-211ENST00000488745 SUPT5HO00267 1087 aaKnown RBP15.36■□□□□ 0.05
SNHG12-211ENST00000488745 CC2D2AQ9P2K1 1620 aa15.32■□□□□ 0.04
SNHG12-211ENST00000488745 WIZO95785 1651 aa15.32■□□□□ 0.04
SNHG12-211ENST00000488745 SMARCA2P51531 1590 aa15.31■□□□□ 0.04
SNHG12-211ENST00000488745 PEG3Q9GZU2 1588 aa15.31■□□□□ 0.04
SNHG12-211ENST00000488745 ATAD2BQ9ULI0 1458 aa15.29■□□□□ 0.04
SNHG12-211ENST00000488745 ZEB1P37275 1124 aaPredicted RBP15.24■□□□□ 0.03
SNHG12-211ENST00000488745 NCAPD3P42695 1498 aa15.22■□□□□ 0.03
SNHG12-211ENST00000488745 BAZ1BQ9UIG0 1483 aaKnown RBP15.21■□□□□ 0.02
SNHG12-211ENST00000488745 HMGXB3Q12766 1538 aa15.19■□□□□ 0.02
SNHG12-211ENST00000488745 TOP2AP11388 1531 aaKnown RBP15.17■□□□□ 0.02
SNHG12-211ENST00000488745 DNAJC5BQ9UF47 199 aa15.17■□□□□ 0.02
SNHG12-211ENST00000488745 CENPBP07199 599 aaPredicted RBP15.16■□□□□ 0.02
SNHG12-211ENST00000488745 PRKCSHP14314 528 aaPredicted RBP15.12■□□□□ 0.01
SNHG12-211ENST00000488745 PPARGC1BQ86YN6 1023 aaKnown RBP15.11■□□□□ 0.01
SNHG12-211ENST00000488745 APLP2Q06481 763 aa15.1■□□□□ 0.01
SNHG12-211ENST00000488745 BCL11AQ9H165 835 aa15.09■□□□□ 0.01
SNHG12-211ENST00000488745 ACIN1Q9UKV3 1341 aaKnown RBP15.04■□□□□ -0
SNHG12-211ENST00000488745 PCGF6Q9BYE7 350 aa15□□□□□ -0.01
SNHG12-211ENST00000488745 CCDC88BA6NC98 1476 aa15□□□□□ -0.01
SNHG12-211ENST00000488745 CADPSQ9ULU8 1353 aa14.82□□□□□ -0.04
SNHG12-211ENST00000488745 CFTRP13569 1480 aa14.8□□□□□ -0.04
SNHG12-211ENST00000488745 LAMC3Q9Y6N6 1575 aa14.78□□□□□ -0.04
SNHG12-211ENST00000488745 FAM9AQ8IZU1 332 aaPredicted RBP14.77□□□□□ -0.04
SNHG12-211ENST00000488745 GTF3C3Q9Y5Q9 886 aa14.75□□□□□ -0.05
SNHG12-211ENST00000488745 TRIM26Q12899 539 aaPredicted RBP14.74□□□□□ -0.05
SNHG12-211ENST00000488745 NESP48681 1621 aa14.74□□□□□ -0.05
SNHG12-211ENST00000488745 PRDM2Q13029 1718 aa14.74□□□□□ -0.05
SNHG12-211ENST00000488745 ANP32EQ9BTT0 268 aa14.73□□□□□ -0.05
SNHG12-211ENST00000488745 NEUROD1Q13562 356 aa14.7□□□□□ -0.06
SNHG12-211ENST00000488745 PDS5BQ9NTI5 1447 aa14.69□□□□□ -0.06
SNHG12-211ENST00000488745 CLSPNQ9HAW4 1339 aa14.67□□□□□ -0.06
SNHG12-211ENST00000488745 FANCD2Q9BXW9 1451 aa14.64□□□□□ -0.07
SNHG12-211ENST00000488745 SLC24A1O60721 1099 aa14.64□□□□□ -0.07
SNHG12-211ENST00000488745 SENP3Q9H4L4 574 aaPredicted RBP14.61□□□□□ -0.07
SNHG12-211ENST00000488745 CEP164Q9UPV0 1460 aa14.6□□□□□ -0.07
SNHG12-211ENST00000488745 KIF21AQ7Z4S6 1674 aa14.59□□□□□ -0.07
SNHG12-211ENST00000488745 ERCC6Q03468 1493 aa14.58□□□□□ -0.08
SNHG12-211ENST00000488745 ABCC8Q09428 1581 aa14.56□□□□□ -0.08
SNHG12-211ENST00000488745 WRNQ14191 1432 aaPredicted RBP eCLIP14.54□□□□□ -0.08
SNHG12-211ENST00000488745 TRIM41Q8WV44 630 aa14.49□□□□□ -0.09
SNHG12-211ENST00000488745 MRC2Q9UBG0 1479 aa14.49□□□□□ -0.09
SNHG12-211ENST00000488745 CUX1P39880 1505 aa14.47□□□□□ -0.09
SNHG12-211ENST00000488745 SYNJ1O43426 1573 aa14.47□□□□□ -0.09
SNHG12-211ENST00000488745 DNMBPQ6XZF7 1577 aa14.47□□□□□ -0.09
SNHG12-211ENST00000488745 TOP2BQ02880 1626 aa14.46□□□□□ -0.09
SNHG12-211ENST00000488745 URB2Q14146 1524 aaKnown RBP14.46□□□□□ -0.09
SNHG12-211ENST00000488745 BIVM-ERCC5R4GMW8 1640 aa14.45□□□□□ -0.1
SNHG12-211ENST00000488745 TOPBP1Q92547 1522 aa14.44□□□□□ -0.1
SNHG12-211ENST00000488745 THOC2Q8NI27 1593 aaKnown RBP14.43□□□□□ -0.1
SNHG12-211ENST00000488745 WDR62O43379 1518 aa14.41□□□□□ -0.1
SNHG12-211ENST00000488745 MYT1LQ9UL68 1186 aa14.41□□□□□ -0.1
SNHG12-211ENST00000488745 PHF23Q9BUL5 403 aaPredicted RBP14.38□□□□□ -0.11
SNHG12-211ENST00000488745 FGD5Q6ZNL6 1462 aa14.37□□□□□ -0.11
SNHG12-211ENST00000488745 DAXXQ9UER7 740 aaPredicted RBP14.36□□□□□ -0.11
SNHG12-211ENST00000488745 POLA1P09884 1462 aaPredicted RBP14.35□□□□□ -0.11
SNHG12-211ENST00000488745 SOGA1O94964 1423 aa14.32□□□□□ -0.12
SNHG12-211ENST00000488745 CUX2O14529 1486 aa14.28□□□□□ -0.12
SNHG12-211ENST00000488745 RAD54L2Q9Y4B4 1467 aa14.28□□□□□ -0.12
SNHG12-211ENST00000488745 CSRNP3Q8WYN3 585 aa14.28□□□□□ -0.12
SNHG12-211ENST00000488745 DIEXFQ68CQ4 756 aaKnown RBP14.27□□□□□ -0.12
SNHG12-211ENST00000488745 IFT140Q96RY7 1462 aa14.27□□□□□ -0.13
SNHG12-211ENST00000488745 TARBP1Q13395 1621 aaKnown RBP14.25□□□□□ -0.13
SNHG12-211ENST00000488745 ABCA10Q8WWZ4 1543 aa14.25□□□□□ -0.13
SNHG12-211ENST00000488745 KIF27Q86VH2 1401 aa14.22□□□□□ -0.13
SNHG12-211ENST00000488745 WDR97A6NE52 1622 aa14.22□□□□□ -0.13
SNHG12-211ENST00000488745 ERICH6BQ5W0A0 696 aa14.21□□□□□ -0.14
SNHG12-211ENST00000488745 EEA1Q15075 1411 aa14.2□□□□□ -0.14
SNHG12-211ENST00000488745 UBE2Q2Q8WVN8 375 aa14.19□□□□□ -0.14
SNHG12-211ENST00000488745 TDRD9Q8NDG6 1382 aaKnown RBP14.18□□□□□ -0.14
SNHG12-211ENST00000488745 RUSC2Q8N2Y8 1516 aa14.17□□□□□ -0.14
SNHG12-211ENST00000488745 POTEDQ86YR6 584 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms