RNA–Protein interactions for RNA: ENST00000368449.8

SHC1-203, Transcript of SHC adaptor protein 1, humanhuman

TSL 5 BASIC

Gene SHC1, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-203ENST00000368449 NISCHQ9Y2I1 1504 aa25.62■■□□□ 1.69
SHC1-203ENST00000368449 SHROOM4Q9ULL8 1493 aa22.12■■□□□ 1.13
SHC1-203ENST00000368449 SUPT5HO00267 1087 aaKnown RBP21.76■■□□□ 1.07
SHC1-203ENST00000368449 ZCCHC6Q5VYS8 1495 aaKnown RBP21.7■■□□□ 1.06
SHC1-203ENST00000368449 CCDC180Q9P1Z9 1646 aa21.58■■□□□ 1.05
SHC1-203ENST00000368449 DCAF8L2P0C7V8 631 aa21.32■■□□□ 1
SHC1-203ENST00000368449 MYO15BQ96JP2 1530 aa21.22■□□□□ 0.99
SHC1-203ENST00000368449 CHIC1Q5VXU3 224 aa21.22■□□□□ 0.99
SHC1-203ENST00000368449 DCAF1Q9Y4B6 1507 aa20.93■□□□□ 0.94
SHC1-203ENST00000368449 HRCP23327 699 aa20.84■□□□□ 0.93
SHC1-203ENST00000368449 PCGF6Q9BYE7 350 aa20.76■□□□□ 0.91
SHC1-203ENST00000368449 LOC105371045A0A1W2PR82 267 aa20.67■□□□□ 0.9
SHC1-203ENST00000368449 PPARGC1BQ86YN6 1023 aaKnown RBP20.5■□□□□ 0.87
SHC1-203ENST00000368449 ABCC9O60706 1549 aa20.49■□□□□ 0.87
SHC1-203ENST00000368449 SCRIBQ14160 1630 aa20.4■□□□□ 0.86
SHC1-203ENST00000368449 RSF1Q96T23 1441 aaPredicted RBP20.4■□□□□ 0.86
SHC1-203ENST00000368449 TRIM26Q12899 539 aaPredicted RBP20.24■□□□□ 0.83
SHC1-203ENST00000368449 RB1CC1Q8TDY2 1594 aa20.2■□□□□ 0.83
SHC1-203ENST00000368449 TRIM41Q8WV44 630 aa20.19■□□□□ 0.82
SHC1-203ENST00000368449 FAM9AQ8IZU1 332 aaPredicted RBP20.12■□□□□ 0.81
SHC1-203ENST00000368449 CECR2Q9BXF3 1484 aa20.07■□□□□ 0.8
SHC1-203ENST00000368449 EHMT2Q96KQ7 1210 aa20.01■□□□□ 0.79
SHC1-203ENST00000368449 MROH2BQ7Z745 1585 aa19.98■□□□□ 0.79
SHC1-203ENST00000368449 NACADO15069 1562 aa19.95■□□□□ 0.78
SHC1-203ENST00000368449 PELP1Q8IZL8 1130 aaKnown RBP19.91■□□□□ 0.78
SHC1-203ENST00000368449 WIZO95785 1651 aa19.87■□□□□ 0.77
SHC1-203ENST00000368449 ZEB1P37275 1124 aaPredicted RBP19.78■□□□□ 0.76
SHC1-203ENST00000368449 SCAF1Q9H7N4 1312 aaKnown RBP19.7■□□□□ 0.74
SHC1-203ENST00000368449 BAZ1AQ9NRL2 1556 aaPredicted RBP19.68■□□□□ 0.74
SHC1-203ENST00000368449 EIF4G1Q04637 1599 aaKnown RBP19.65■□□□□ 0.74
SHC1-203ENST00000368449 ABCC8Q09428 1581 aa19.53■□□□□ 0.72
SHC1-203ENST00000368449 CCDC88BA6NC98 1476 aa19.5■□□□□ 0.71
SHC1-203ENST00000368449 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.5■□□□□ 0.71
SHC1-203ENST00000368449 TOP2AP11388 1531 aaKnown RBP19.49■□□□□ 0.71
SHC1-203ENST00000368449 SMARCA4P51532 1647 aa19.46■□□□□ 0.71
SHC1-203ENST00000368449 SMARCA2P51531 1590 aa19.43■□□□□ 0.7
SHC1-203ENST00000368449 SOGA1O94964 1423 aa19.4■□□□□ 0.7
SHC1-203ENST00000368449 TTBK1Q5TCY1 1321 aaPredicted RBP19.39■□□□□ 0.69
SHC1-203ENST00000368449 CCER1Q8TC90 406 aaPredicted RBP19.38■□□□□ 0.69
SHC1-203ENST00000368449 UNC13AQ9UPW8 1703 aa19.37■□□□□ 0.69
SHC1-203ENST00000368449 CEP162Q5TB80 1403 aa19.34■□□□□ 0.69
SHC1-203ENST00000368449 RUSC2Q8N2Y8 1516 aa19.32■□□□□ 0.68
SHC1-203ENST00000368449 WRNQ14191 1432 aaPredicted RBP eCLIP19.32■□□□□ 0.68
SHC1-203ENST00000368449 TNIKQ9UKE5 1360 aa19.26■□□□□ 0.67
SHC1-203ENST00000368449 CSRNP3Q8WYN3 585 aa19.26■□□□□ 0.67
SHC1-203ENST00000368449 PABPN1Q86U42 306 aaKnown RBP eCLIP19.25■□□□□ 0.678e-7■■□□□ 14.4
SHC1-203ENST00000368449 UBTFP17480 764 aaKnown RBP19.21■□□□□ 0.67
SHC1-203ENST00000368449 ACIN1Q9UKV3 1341 aaKnown RBP19.17■□□□□ 0.66
SHC1-203ENST00000368449 NEUROD1Q13562 356 aa19.17■□□□□ 0.66
SHC1-203ENST00000368449 EEA1Q15075 1411 aa19.16■□□□□ 0.66
SHC1-203ENST00000368449 BICRAQ9NZM4 1560 aa19.15■□□□□ 0.66
SHC1-203ENST00000368449 DIEXFQ68CQ4 756 aaKnown RBP19.1■□□□□ 0.65
SHC1-203ENST00000368449 GOLGA3Q08378 1498 aa19.1■□□□□ 0.65
SHC1-203ENST00000368449 MYT1Q01538 1121 aa19.07■□□□□ 0.64
SHC1-203ENST00000368449 GTF3C3Q9Y5Q9 886 aa19.05■□□□□ 0.64
SHC1-203ENST00000368449 SYNJ1O43426 1573 aa19.05■□□□□ 0.64
SHC1-203ENST00000368449 PEG3Q9GZU2 1588 aa19.04■□□□□ 0.64
SHC1-203ENST00000368449 CEP164Q9UPV0 1460 aa18.96■□□□□ 0.63
SHC1-203ENST00000368449 ATAD2BQ9ULI0 1458 aa18.95■□□□□ 0.62
SHC1-203ENST00000368449 HNRNPUL2Q1KMD3 747 aaKnown RBP18.94■□□□□ 0.62
SHC1-203ENST00000368449 CLIP1P30622 1438 aa18.93■□□□□ 0.62
SHC1-203ENST00000368449 KIF21BO75037 1637 aa18.93■□□□□ 0.62
SHC1-203ENST00000368449 ZNF316A6NFI3 1004 aaPredicted RBP18.9■□□□□ 0.62
SHC1-203ENST00000368449 RAPGEF2Q9Y4G8 1499 aa18.89■□□□□ 0.61
SHC1-203ENST00000368449 BAZ1BQ9UIG0 1483 aaKnown RBP18.88■□□□□ 0.61
SHC1-203ENST00000368449 CENPBP07199 599 aaPredicted RBP18.87■□□□□ 0.61
SHC1-203ENST00000368449 RANGAP1P46060 587 aaPredicted RBP18.87■□□□□ 0.61
SHC1-203ENST00000368449 VPS8Q8N3P4 1428 aa18.85■□□□□ 0.61
SHC1-203ENST00000368449 APLP2Q06481 763 aa18.74■□□□□ 0.59
SHC1-203ENST00000368449 TOP2BQ02880 1626 aa18.73■□□□□ 0.59
SHC1-203ENST00000368449 MIER1Q8N108 512 aa18.72■□□□□ 0.59
SHC1-203ENST00000368449 YTHDC1Q96MU7 727 aaKnown RBP18.71■□□□□ 0.59
SHC1-203ENST00000368449 PRXQ9BXM0 1461 aa18.64■□□□□ 0.57
SHC1-203ENST00000368449 BIVM-ERCC5R4GMW8 1640 aa18.64■□□□□ 0.57
SHC1-203ENST00000368449 KANK4Q5T7N3 995 aaPredicted RBP18.63■□□□□ 0.57
SHC1-203ENST00000368449 ARAP1Q96P48 1450 aa18.62■□□□□ 0.57
SHC1-203ENST00000368449 ERICH3Q5RHP9 1530 aa18.58■□□□□ 0.57
SHC1-203ENST00000368449 CUX1P39880 1505 aa18.57■□□□□ 0.56
SHC1-203ENST00000368449 DHX57Q6P158 1386 aaKnown RBP18.55■□□□□ 0.56
SHC1-203ENST00000368449 NCAPD3P42695 1498 aa18.52■□□□□ 0.55
SHC1-203ENST00000368449 KIF27Q86VH2 1401 aa18.48■□□□□ 0.55
SHC1-203ENST00000368449 HMGXB3Q12766 1538 aa18.48■□□□□ 0.55
SHC1-203ENST00000368449 CLSPNQ9HAW4 1339 aa18.45■□□□□ 0.54
SHC1-203ENST00000368449 RRBP1Q9P2E9 1410 aaKnown RBP18.44■□□□□ 0.54
SHC1-203ENST00000368449 CFTRP13569 1480 aa18.44■□□□□ 0.54
SHC1-203ENST00000368449 ARHGAP35Q9NRY4 1499 aa18.44■□□□□ 0.54
SHC1-203ENST00000368449 ITGAEP38570 1179 aa18.38■□□□□ 0.53
SHC1-203ENST00000368449 CCNB3Q8WWL7 1395 aa18.37■□□□□ 0.53
SHC1-203ENST00000368449 CUX2O14529 1486 aa18.34■□□□□ 0.53
SHC1-203ENST00000368449 IGF1RP08069 1367 aa18.33■□□□□ 0.53
SHC1-203ENST00000368449 RAB3GAP2Q9H2M9 1393 aa18.25■□□□□ 0.51
SHC1-203ENST00000368449 CARMIL1Q5VZK9 1371 aa18.23■□□□□ 0.51
SHC1-203ENST00000368449 TIAM1Q13009 1591 aa18.22■□□□□ 0.51
SHC1-203ENST00000368449 MAPKBP1O60336 1514 aa18.21■□□□□ 0.51
SHC1-203ENST00000368449 FGD5Q6ZNL6 1462 aa18.21■□□□□ 0.5
SHC1-203ENST00000368449 CADPSQ9ULU8 1353 aa18.2■□□□□ 0.5
SHC1-203ENST00000368449 PHLDB1Q86UU1 1377 aa18.19■□□□□ 0.5
SHC1-203ENST00000368449 PRDM2Q13029 1718 aa18.18■□□□□ 0.5
SHC1-203ENST00000368449 P3H3Q8IVL6 736 aa18.18■□□□□ 0.5
SHC1-203ENST00000368449 LRRC9Q6ZRR7 1453 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms