RNA–Protein interactions for RNA: ENST00000393304.5

RAB43-202, Transcript of RAB43, member RAS oncogene family, humanhuman

APPRIS P1 TSL 4 BASIC

Gene RAB43, Length 4,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43-202ENST00000393304 NISCHQ9Y2I1 1504 aa25.66■■□□□ 1.7
RAB43-202ENST00000393304 DCAF8L2P0C7V8 631 aa24.53■■□□□ 1.52
RAB43-202ENST00000393304 SUPT5HO00267 1087 aaKnown RBP24.33■■□□□ 1.49
RAB43-202ENST00000393304 SHROOM4Q9ULL8 1493 aa24.05■■□□□ 1.44
RAB43-202ENST00000393304 PCGF6Q9BYE7 350 aa23.27■■□□□ 1.32
RAB43-202ENST00000393304 EHMT2Q96KQ7 1210 aa23.01■■□□□ 1.27
RAB43-202ENST00000393304 FAM9AQ8IZU1 332 aaPredicted RBP22.76■■□□□ 1.23
RAB43-202ENST00000393304 HRCP23327 699 aa22.72■■□□□ 1.23
RAB43-202ENST00000393304 CHIC1Q5VXU3 224 aa22.58■■□□□ 1.21
RAB43-202ENST00000393304 ZEB1P37275 1124 aaPredicted RBP22.56■■□□□ 1.2
RAB43-202ENST00000393304 TRIM41Q8WV44 630 aa22.5■■□□□ 1.19
RAB43-202ENST00000393304 TRIM26Q12899 539 aaPredicted RBP22.37■■□□□ 1.17
RAB43-202ENST00000393304 LOC105371045A0A1W2PR82 267 aa22.37■■□□□ 1.17
RAB43-202ENST00000393304 TTBK1Q5TCY1 1321 aaPredicted RBP22.3■■□□□ 1.16
RAB43-202ENST00000393304 PPARGC1BQ86YN6 1023 aaKnown RBP22.29■■□□□ 1.16
RAB43-202ENST00000393304 CCER1Q8TC90 406 aaPredicted RBP22.26■■□□□ 1.15
RAB43-202ENST00000393304 PELP1Q8IZL8 1130 aaKnown RBP22.24■■□□□ 1.15
RAB43-202ENST00000393304 CENPBP07199 599 aaPredicted RBP22.17■■□□□ 1.14
RAB43-202ENST00000393304 APLP2Q06481 763 aa22.15■■□□□ 1.14
RAB43-202ENST00000393304 UBTFP17480 764 aaKnown RBP21.87■■□□□ 1.09
RAB43-202ENST00000393304 RANGAP1P46060 587 aaPredicted RBP21.78■■□□□ 1.08
RAB43-202ENST00000393304 YTHDC1Q96MU7 727 aaKnown RBP21.75■■□□□ 1.07
RAB43-202ENST00000393304 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.62■■□□□ 1.05
RAB43-202ENST00000393304 MYT1Q01538 1121 aa21.57■■□□□ 1.04
RAB43-202ENST00000393304 DIEXFQ68CQ4 756 aaKnown RBP21.49■■□□□ 1.03
RAB43-202ENST00000393304 ZCCHC6Q5VYS8 1495 aaKnown RBP21.45■■□□□ 1.02
RAB43-202ENST00000393304 HNRNPUL2Q1KMD3 747 aaKnown RBP21.4■■□□□ 1.02
RAB43-202ENST00000393304 DCAF1Q9Y4B6 1507 aa21.39■■□□□ 1.02
RAB43-202ENST00000393304 MYO15BQ96JP2 1530 aa21.36■■□□□ 1.01
RAB43-202ENST00000393304 GTF3C3Q9Y5Q9 886 aa21.26■□□□□ 0.99
RAB43-202ENST00000393304 ATP1B4Q9UN42 357 aaPredicted RBP21.26■□□□□ 0.99
RAB43-202ENST00000393304 NEFLP07196 543 aa21.19■□□□□ 0.98
RAB43-202ENST00000393304 ACIN1Q9UKV3 1341 aaKnown RBP21.16■□□□□ 0.98
RAB43-202ENST00000393304 ITGAEP38570 1179 aa21.12■□□□□ 0.97
RAB43-202ENST00000393304 ERICH6Q7L0X2 663 aa21.11■□□□□ 0.97
RAB43-202ENST00000393304 ZNF316A6NFI3 1004 aaPredicted RBP21.05■□□□□ 0.96
RAB43-202ENST00000393304 SCAF1Q9H7N4 1312 aaKnown RBP20.97■□□□□ 0.95
RAB43-202ENST00000393304 ABCC9O60706 1549 aa20.94■□□□□ 0.94
RAB43-202ENST00000393304 CSRNP3Q8WYN3 585 aa20.9■□□□□ 0.94
RAB43-202ENST00000393304 CCDC180Q9P1Z9 1646 aa20.89■□□□□ 0.94
RAB43-202ENST00000393304 NEUROD1Q13562 356 aa20.89■□□□□ 0.93
RAB43-202ENST00000393304 SCRIBQ14160 1630 aa20.75■□□□□ 0.91
RAB43-202ENST00000393304 PABPN1Q86U42 306 aaKnown RBP eCLIP20.75■□□□□ 0.91
RAB43-202ENST00000393304 RSF1Q96T23 1441 aaPredicted RBP20.72■□□□□ 0.91
RAB43-202ENST00000393304 BCANQ96GW7 911 aa20.62■□□□□ 0.89
RAB43-202ENST00000393304 FAM50AQ14320 339 aaKnown RBP20.61■□□□□ 0.89
RAB43-202ENST00000393304 MIER1Q8N108 512 aa20.53■□□□□ 0.88
RAB43-202ENST00000393304 POLR3GLQ9BT43 218 aa20.47■□□□□ 0.87
RAB43-202ENST00000393304 ANP32CO43423 234 aa20.45■□□□□ 0.86
RAB43-202ENST00000393304 CNGB1Q14028 1251 aaPredicted RBP20.44■□□□□ 0.86
RAB43-202ENST00000393304 CLSPNQ9HAW4 1339 aa20.39■□□□□ 0.85
RAB43-202ENST00000393304 CEP162Q5TB80 1403 aa20.37■□□□□ 0.85
RAB43-202ENST00000393304 RB1CC1Q8TDY2 1594 aa20.29■□□□□ 0.84
RAB43-202ENST00000393304 TRIM52Q96A61 297 aa20.29■□□□□ 0.84
RAB43-202ENST00000393304 FKBP8Q14318 412 aa20.27■□□□□ 0.84
RAB43-202ENST00000393304 CLIP1P30622 1438 aa20.26■□□□□ 0.83
RAB43-202ENST00000393304 DDX10Q13206 875 aaKnown RBP20.26■□□□□ 0.83
RAB43-202ENST00000393304 CDK11AQ9UQ88 783 aaPredicted RBP20.26■□□□□ 0.83
RAB43-202ENST00000393304 P3H3Q8IVL6 736 aa20.26■□□□□ 0.83
RAB43-202ENST00000393304 TNIKQ9UKE5 1360 aa20.25■□□□□ 0.83
RAB43-202ENST00000393304 EEA1Q15075 1411 aa20.23■□□□□ 0.83
RAB43-202ENST00000393304 CECR2Q9BXF3 1484 aa20.2■□□□□ 0.82
RAB43-202ENST00000393304 GOLGA3Q08378 1498 aa20.16■□□□□ 0.82
RAB43-202ENST00000393304 DAXXQ9UER7 740 aaPredicted RBP20.14■□□□□ 0.81
RAB43-202ENST00000393304 RTL5Q5HYW3 569 aaPredicted RBP20.11■□□□□ 0.81
RAB43-202ENST00000393304 WRNQ14191 1432 aaPredicted RBP eCLIP20.05■□□□□ 0.8
RAB43-202ENST00000393304 SOGA1O94964 1423 aa20.04■□□□□ 0.8
RAB43-202ENST00000393304 HNRNPUQ00839 825 aaKnown RBP eCLIP20.03■□□□□ 0.8
RAB43-202ENST00000393304 TONSLQ96HA7 1378 aa20.03■□□□□ 0.8
RAB43-202ENST00000393304 ZNF326Q5BKZ1 582 aaKnown RBP20■□□□□ 0.79
RAB43-202ENST00000393304 NACADO15069 1562 aa20■□□□□ 0.79
RAB43-202ENST00000393304 HIRIP3Q9BW71 556 aaPredicted RBP20■□□□□ 0.79
RAB43-202ENST00000393304 MROH2BQ7Z745 1585 aa19.98■□□□□ 0.79
RAB43-202ENST00000393304 CEP164Q9UPV0 1460 aa19.97■□□□□ 0.79
RAB43-202ENST00000393304 BAZ1AQ9NRL2 1556 aaPredicted RBP19.93■□□□□ 0.78
RAB43-202ENST00000393304 SUPT16HQ9Y5B9 1047 aaKnown RBP19.92■□□□□ 0.78
RAB43-202ENST00000393304 CCDC88BA6NC98 1476 aa19.9■□□□□ 0.78
RAB43-202ENST00000393304 ARID3CA6NKF2 412 aa19.87■□□□□ 0.77
RAB43-202ENST00000393304 FAM9BQ8IZU0 186 aa19.87■□□□□ 0.77
RAB43-202ENST00000393304 ABCC8Q09428 1581 aa19.84■□□□□ 0.77
RAB43-202ENST00000393304 ANP32EQ9BTT0 268 aa19.82■□□□□ 0.76
RAB43-202ENST00000393304 IRX6P78412 446 aaPredicted RBP19.81■□□□□ 0.76
RAB43-202ENST00000393304 ANP32AP39687 249 aaKnown RBP19.8■□□□□ 0.76
RAB43-202ENST00000393304 CHIC2Q9UKJ5 165 aa19.78■□□□□ 0.76
RAB43-202ENST00000393304 MYT1LQ9UL68 1186 aa19.78■□□□□ 0.76
RAB43-202ENST00000393304 SIN3AQ96ST3 1273 aa19.78■□□□□ 0.76
RAB43-202ENST00000393304 VPS8Q8N3P4 1428 aa19.78■□□□□ 0.76
RAB43-202ENST00000393304 MRS2Q9HD23 443 aa19.73■□□□□ 0.75
RAB43-202ENST00000393304 MTUS2Q5JR59 1369 aa19.71■□□□□ 0.75
RAB43-202ENST00000393304 CCNB3Q8WWL7 1395 aa19.71■□□□□ 0.75
RAB43-202ENST00000393304 WIZO95785 1651 aa19.7■□□□□ 0.74
RAB43-202ENST00000393304 KANK4Q5T7N3 995 aaPredicted RBP19.7■□□□□ 0.74
RAB43-202ENST00000393304 KIF27Q86VH2 1401 aa19.69■□□□□ 0.74
RAB43-202ENST00000393304 EIF4G2P78344 907 aaKnown RBP eCLIP19.68■□□□□ 0.74
RAB43-202ENST00000393304 NPM2Q86SE8 214 aaKnown RBP19.68■□□□□ 0.74
RAB43-202ENST00000393304 BAZ1BQ9UIG0 1483 aaKnown RBP19.67■□□□□ 0.74
RAB43-202ENST00000393304 ZNF777Q9ULD5 760 aaPredicted RBP19.67■□□□□ 0.74
RAB43-202ENST00000393304 CCDC136Q96JN2 1154 aa19.66■□□□□ 0.74
RAB43-202ENST00000393304 SLC4A1APQ9BWU0 796 aaKnown RBP19.63■□□□□ 0.73
RAB43-202ENST00000393304 RRP7BPQ9NSQ0 103 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms