RNA–Protein interactions for RNA: ENST00000366442.2

SHC1-201, Transcript of SHC adaptor protein 1, humanhuman

TSL 3

Gene SHC1, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-201ENST00000366442 NISCHQ9Y2I1 1504 aa58.4■■■■■ 6.94
SHC1-201ENST00000366442 CCDC180Q9P1Z9 1646 aa52.18■■■■■ 5.94
SHC1-201ENST00000366442 ABCC9O60706 1549 aa51.53■■■■■ 5.84
SHC1-201ENST00000366442 RB1CC1Q8TDY2 1594 aa49.38■■■■■ 5.5
SHC1-201ENST00000366442 NACADO15069 1562 aa49.21■■■■■ 5.47
SHC1-201ENST00000366442 DCAF8L2P0C7V8 631 aa48.92■■■■■ 5.42
SHC1-201ENST00000366442 MYO15BQ96JP2 1530 aa48.78■■■■■ 5.4
SHC1-201ENST00000366442 ZCCHC6Q5VYS8 1495 aaKnown RBP48.54■■■■■ 5.36
SHC1-201ENST00000366442 DCAF1Q9Y4B6 1507 aa48.35■■■■■ 5.33
SHC1-201ENST00000366442 UNC13AQ9UPW8 1703 aa48.22■■■■■ 5.31
SHC1-201ENST00000366442 PABPN1Q86U42 306 aaKnown RBP eCLIP48.04■■■■■ 5.284e-7■■□□□ 11.4
SHC1-201ENST00000366442 BICRAQ9NZM4 1560 aa47.89■■■■■ 5.26
SHC1-201ENST00000366442 DNAJC5BQ9UF47 199 aa47.81■■■■■ 5.24
SHC1-201ENST00000366442 SCRIBQ14160 1630 aa47.5■■■■■ 5.19
SHC1-201ENST00000366442 SHROOM4Q9ULL8 1493 aa47.42■■■■■ 5.18
SHC1-201ENST00000366442 EIF4G1Q04637 1599 aaKnown RBP46.69■■■■■ 5.06
SHC1-201ENST00000366442 CC2D2AQ9P2K1 1620 aa46.62■■■■■ 5.05
SHC1-201ENST00000366442 CECR2Q9BXF3 1484 aa46.4■■■■■ 5.02
SHC1-201ENST00000366442 SMARCA4P51532 1647 aa45.42■■■■■ 4.86
SHC1-201ENST00000366442 NCAPD3P42695 1498 aa45.42■■■■■ 4.86
SHC1-201ENST00000366442 ATAD2BQ9ULI0 1458 aa45.34■■■■■ 4.85
SHC1-201ENST00000366442 BAZ1AQ9NRL2 1556 aaPredicted RBP45.31■■■■■ 4.84
SHC1-201ENST00000366442 SMARCA2P51531 1590 aa45.26■■■■■ 4.84
SHC1-201ENST00000366442 HMGXB3Q12766 1538 aa45.14■■■■■ 4.82
SHC1-201ENST00000366442 PEG3Q9GZU2 1588 aa45.03■■■■■ 4.8
SHC1-201ENST00000366442 MROH2BQ7Z745 1585 aa44.97■■■■■ 4.79
SHC1-201ENST00000366442 BAZ1BQ9UIG0 1483 aaKnown RBP44.91■■■■■ 4.78
SHC1-201ENST00000366442 ERCC6Q03468 1493 aa44.48■■■■■ 4.71
SHC1-201ENST00000366442 WIZO95785 1651 aa44.44■■■■■ 4.7
SHC1-201ENST00000366442 NESP48681 1621 aa44.42■■■■■ 4.7
SHC1-201ENST00000366442 LAMC3Q9Y6N6 1575 aa44.3■■■■■ 4.68
SHC1-201ENST00000366442 RSF1Q96T23 1441 aaPredicted RBP44.27■■■■■ 4.68
SHC1-201ENST00000366442 CUX2O14529 1486 aa44.27■■■■■ 4.68
SHC1-201ENST00000366442 CADPSQ9ULU8 1353 aa44.05■■■■■ 4.64
SHC1-201ENST00000366442 PDS5BQ9NTI5 1447 aa44.02■■■■■ 4.64
SHC1-201ENST00000366442 TOP2AP11388 1531 aaKnown RBP43.98■■■■■ 4.63
SHC1-201ENST00000366442 THOC2Q8NI27 1593 aaKnown RBP43.92■■■■■ 4.62
SHC1-201ENST00000366442 KIF21AQ7Z4S6 1674 aa43.9■■■■■ 4.62
SHC1-201ENST00000366442 CFTRP13569 1480 aa43.68■■■■■ 4.58
SHC1-201ENST00000366442 MRC2Q9UBG0 1479 aa43.58■■■■■ 4.57
SHC1-201ENST00000366442 DNAJC5Q9H3Z4 198 aa43.54■■■■■ 4.56
SHC1-201ENST00000366442 FANCD2Q9BXW9 1451 aa43.52■■■■■ 4.56
SHC1-201ENST00000366442 CEP164Q9UPV0 1460 aa43.52■■■■■ 4.56
SHC1-201ENST00000366442 WDR62O43379 1518 aa43.48■■■■■ 4.55
SHC1-201ENST00000366442 CCDC88BA6NC98 1476 aa43.45■■■■■ 4.55
SHC1-201ENST00000366442 PRDM2Q13029 1718 aa43.28■■■■■ 4.52
SHC1-201ENST00000366442 URB2Q14146 1524 aaKnown RBP43.12■■■■■ 4.49
SHC1-201ENST00000366442 ABCC8Q09428 1581 aa42.78■■■■■ 4.44
SHC1-201ENST00000366442 TOPBP1Q92547 1522 aa42.76■■■■■ 4.44
SHC1-201ENST00000366442 DNMBPQ6XZF7 1577 aa42.68■■■■■ 4.42
SHC1-201ENST00000366442 IFT140Q96RY7 1462 aa42.65■■■■■ 4.42
SHC1-201ENST00000366442 SUPT5HO00267 1087 aaKnown RBP42.64■■■■■ 4.42
SHC1-201ENST00000366442 ZNF608Q9ULD9 1512 aaPredicted RBP42.47■■■■■ 4.39
SHC1-201ENST00000366442 POLA1P09884 1462 aaPredicted RBP42.36■■■■■ 4.37
SHC1-201ENST00000366442 TARBP1Q13395 1621 aaKnown RBP42.35■■■■■ 4.37
SHC1-201ENST00000366442 OSCARQ8IYS5 282 aa42.3■■■■■ 4.36
SHC1-201ENST00000366442 EIF4G3O43432 1585 aaKnown RBP42.29■■■■■ 4.36
SHC1-201ENST00000366442 CUX1P39880 1505 aa42.23■■■■■ 4.35
SHC1-201ENST00000366442 SOGA1O94964 1423 aa42.17■■■■■ 4.34
SHC1-201ENST00000366442 FGD5Q6ZNL6 1462 aa42.17■■■■■ 4.34
SHC1-201ENST00000366442 AQRO60306 1485 aaKnown RBP eCLIP42.16■■■■■ 4.344e-10■■■■■ 31.3
SHC1-201ENST00000366442 RAD54L2Q9Y4B4 1467 aa42.16■■■■■ 4.34
SHC1-201ENST00000366442 WDR97A6NE52 1622 aa42.04■■■■■ 4.32
SHC1-201ENST00000366442 TDRD9Q8NDG6 1382 aaKnown RBP41.99■■■■■ 4.31
SHC1-201ENST00000366442 CHD1O14646 1710 aa41.84■■■■■ 4.29
SHC1-201ENST00000366442 TRIM41Q8WV44 630 aa41.79■■■■■ 4.28
SHC1-201ENST00000366442 ABCA10Q8WWZ4 1543 aa41.77■■■■■ 4.28
SHC1-201ENST00000366442 GRIN2BQ13224 1484 aa41.77■■■■■ 4.28
SHC1-201ENST00000366442 SNAPC4Q5SXM2 1469 aa41.76■■■■■ 4.28
SHC1-201ENST00000366442 WRNQ14191 1432 aaPredicted RBP eCLIP41.76■■■■■ 4.28
SHC1-201ENST00000366442 TOP2BQ02880 1626 aa41.73■■■■■ 4.27
SHC1-201ENST00000366442 BIVM-ERCC5R4GMW8 1640 aa41.73■■■■■ 4.27
SHC1-201ENST00000366442 MAGI1Q96QZ7 1491 aaPredicted RBP41.73■■■■■ 4.27
SHC1-201ENST00000366442 FBLN2P98095 1184 aa41.73■■■■■ 4.27
SHC1-201ENST00000366442 GAPVD1Q14C86 1478 aa41.69■■■■■ 4.26
SHC1-201ENST00000366442 RIMBP3CA6NJZ7 1639 aa41.66■■■■■ 4.26
SHC1-201ENST00000366442 RIMBP3BA6NNM3 1639 aa41.66■■■■■ 4.26
SHC1-201ENST00000366442 RIMBP3Q9UFD9 1639 aa41.66■■■■■ 4.26
SHC1-201ENST00000366442 SYNJ1O43426 1573 aa41.66■■■■■ 4.26
SHC1-201ENST00000366442 ABCA5Q8WWZ7 1642 aa41.64■■■■■ 4.26
SHC1-201ENST00000366442 ARHGEF11O15085 1522 aa41.62■■■■■ 4.25
SHC1-201ENST00000366442 PBRM1Q86U86 1689 aa41.61■■■■■ 4.25
SHC1-201ENST00000366442 CHMP7Q8WUX9 453 aaPredicted RBP41.57■■■■■ 4.25
SHC1-201ENST00000366442 SYNJ2O15056 1496 aa41.57■■■■■ 4.25
SHC1-201ENST00000366442 CLASP1Q7Z460 1538 aa41.43■■■■■ 4.22
SHC1-201ENST00000366442 ADAMTS12P58397 1594 aa41.28■■■■■ 4.2
SHC1-201ENST00000366442 ERICH3Q5RHP9 1530 aa41.27■■■■■ 4.2
SHC1-201ENST00000366442 ARAP1Q96P48 1450 aa41.23■■■■■ 4.19
SHC1-201ENST00000366442 CYB5RLQ6IPT4 315 aa41.23■■■■■ 4.19
SHC1-201ENST00000366442 GRIN2AQ12879 1464 aa41.22■■■■■ 4.19
SHC1-201ENST00000366442 FHAD1B1AJZ9 1412 aa41.19■■■■■ 4.18
SHC1-201ENST00000366442 NUP160Q12769 1436 aa41.09■■■■■ 4.17
SHC1-201ENST00000366442 CEP170Q5SW79 1584 aa41.03■■■■■ 4.16
SHC1-201ENST00000366442 KIF27Q86VH2 1401 aa40.93■■■■■ 4.14
SHC1-201ENST00000366442 IGF1RP08069 1367 aa40.84■■■■■ 4.13
SHC1-201ENST00000366442 SHROOM2Q13796 1616 aa40.83■■■■■ 4.13
SHC1-201ENST00000366442 CUL7Q14999 1698 aa40.76■■■■■ 4.12
SHC1-201ENST00000366442 ERCC6L2Q5T890 1561 aa40.75■■■■■ 4.11
SHC1-201ENST00000366442 RUSC2Q8N2Y8 1516 aa40.67■■■■■ 4.1
SHC1-201ENST00000366442 JPH4Q96JJ6 628 aa40.63■■■■■ 4.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms