RNA–Protein interactions for RNA: ENST00000368453.8

SHC1-205, Transcript of SHC adaptor protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHC1, Length 3,062 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-205ENST00000368453 NISCHQ9Y2I1 1504 aa27.76■■■□□ 2.03
SHC1-205ENST00000368453 HRCP23327 699 aa25.28■■□□□ 1.64
SHC1-205ENST00000368453 SHROOM4Q9ULL8 1493 aa25.22■■□□□ 1.63
SHC1-205ENST00000368453 SUPT5HO00267 1087 aaKnown RBP25.22■■□□□ 1.63
SHC1-205ENST00000368453 PCGF6Q9BYE7 350 aa25.02■■□□□ 1.6
SHC1-205ENST00000368453 PPARGC1BQ86YN6 1023 aaKnown RBP24.99■■□□□ 1.59
SHC1-205ENST00000368453 MYO15BQ96JP2 1530 aa24.52■■□□□ 1.52
SHC1-205ENST00000368453 CHIC1Q5VXU3 224 aa24.51■■□□□ 1.51
SHC1-205ENST00000368453 PELP1Q8IZL8 1130 aaKnown RBP24.37■■□□□ 1.49
SHC1-205ENST00000368453 LOC105371045A0A1W2PR82 267 aa24.16■■□□□ 1.46
SHC1-205ENST00000368453 TRIM26Q12899 539 aaPredicted RBP24■■□□□ 1.43
SHC1-205ENST00000368453 SCAF1Q9H7N4 1312 aaKnown RBP23.98■■□□□ 1.43
SHC1-205ENST00000368453 DCAF8L2P0C7V8 631 aa23.98■■□□□ 1.43
SHC1-205ENST00000368453 DCAF1Q9Y4B6 1507 aa23.88■■□□□ 1.41
SHC1-205ENST00000368453 ZEB1P37275 1124 aaPredicted RBP23.78■■□□□ 1.4
SHC1-205ENST00000368453 ZCCHC6Q5VYS8 1495 aaKnown RBP23.55■■□□□ 1.36
SHC1-205ENST00000368453 CCDC180Q9P1Z9 1646 aa23.53■■□□□ 1.36
SHC1-205ENST00000368453 EHMT2Q96KQ7 1210 aa23.51■■□□□ 1.35
SHC1-205ENST00000368453 FAM9AQ8IZU1 332 aaPredicted RBP23.42■■□□□ 1.34
SHC1-205ENST00000368453 ACIN1Q9UKV3 1341 aaKnown RBP23.39■■□□□ 1.34
SHC1-205ENST00000368453 MYT1Q01538 1121 aa23.39■■□□□ 1.33
SHC1-205ENST00000368453 NEUROD1Q13562 356 aa23.39■■□□□ 1.33
SHC1-205ENST00000368453 GTF3C3Q9Y5Q9 886 aa23.34■■□□□ 1.33
SHC1-205ENST00000368453 CENPBP07199 599 aaPredicted RBP23.21■■□□□ 1.31
SHC1-205ENST00000368453 TRIM41Q8WV44 630 aa23.19■■□□□ 1.3
SHC1-205ENST00000368453 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.18■■□□□ 1.3
SHC1-205ENST00000368453 CCER1Q8TC90 406 aaPredicted RBP23.16■■□□□ 1.3
SHC1-205ENST00000368453 DIEXFQ68CQ4 756 aaKnown RBP23.09■■□□□ 1.29
SHC1-205ENST00000368453 YTHDC1Q96MU7 727 aaKnown RBP22.96■■□□□ 1.27
SHC1-205ENST00000368453 TTBK1Q5TCY1 1321 aaPredicted RBP22.92■■□□□ 1.26
SHC1-205ENST00000368453 ZNF316A6NFI3 1004 aaPredicted RBP22.56■■□□□ 1.2
SHC1-205ENST00000368453 RSF1Q96T23 1441 aaPredicted RBP22.48■■□□□ 1.19
SHC1-205ENST00000368453 MIER1Q8N108 512 aa22.48■■□□□ 1.19
SHC1-205ENST00000368453 RB1CC1Q8TDY2 1594 aa22.37■■□□□ 1.17
SHC1-205ENST00000368453 ABCC9O60706 1549 aa22.35■■□□□ 1.17
SHC1-205ENST00000368453 HNRNPUL2Q1KMD3 747 aaKnown RBP22.23■■□□□ 1.15
SHC1-205ENST00000368453 SCRIBQ14160 1630 aa22.15■■□□□ 1.14
SHC1-205ENST00000368453 UBTFP17480 764 aaKnown RBP22.12■■□□□ 1.13
SHC1-205ENST00000368453 SUPT16HQ9Y5B9 1047 aaKnown RBP22.09■■□□□ 1.13
SHC1-205ENST00000368453 BCL11AQ9H165 835 aa22.05■■□□□ 1.12
SHC1-205ENST00000368453 ANP32EQ9BTT0 268 aa22.05■■□□□ 1.12
SHC1-205ENST00000368453 CEP162Q5TB80 1403 aa21.99■■□□□ 1.11
SHC1-205ENST00000368453 TSHZ2Q9NRE2 1034 aa21.98■■□□□ 1.11
SHC1-205ENST00000368453 BCANQ96GW7 911 aa21.93■■□□□ 1.1
SHC1-205ENST00000368453 WRNQ14191 1432 aaPredicted RBP eCLIP21.9■■□□□ 1.1
SHC1-205ENST00000368453 CECR2Q9BXF3 1484 aa21.9■■□□□ 1.1
SHC1-205ENST00000368453 CSRNP3Q8WYN3 585 aa21.88■■□□□ 1.09
SHC1-205ENST00000368453 RANGAP1P46060 587 aaPredicted RBP21.84■■□□□ 1.09
SHC1-205ENST00000368453 CLSPNQ9HAW4 1339 aa21.82■■□□□ 1.08
SHC1-205ENST00000368453 APLP2Q06481 763 aa21.81■■□□□ 1.08
SHC1-205ENST00000368453 MROH2BQ7Z745 1585 aa21.79■■□□□ 1.08
SHC1-205ENST00000368453 TNIKQ9UKE5 1360 aa21.77■■□□□ 1.08
SHC1-205ENST00000368453 CCDC88BA6NC98 1476 aa21.75■■□□□ 1.07
SHC1-205ENST00000368453 SOGA1O94964 1423 aa21.75■■□□□ 1.07
SHC1-205ENST00000368453 ABCC8Q09428 1581 aa21.72■■□□□ 1.07
SHC1-205ENST00000368453 WIZO95785 1651 aa21.71■■□□□ 1.07
SHC1-205ENST00000368453 FKBP8Q14318 412 aa21.66■■□□□ 1.06
SHC1-205ENST00000368453 KCNH8Q96L42 1107 aa21.63■■□□□ 1.05
SHC1-205ENST00000368453 RUSC2Q8N2Y8 1516 aa21.6■■□□□ 1.05
SHC1-205ENST00000368453 NEFLP07196 543 aa21.53■■□□□ 1.04
SHC1-205ENST00000368453 ITGAEP38570 1179 aa21.53■■□□□ 1.04
SHC1-205ENST00000368453 RBM19Q9Y4C8 960 aaKnown RBP21.52■■□□□ 1.04
SHC1-205ENST00000368453 GOLGA3Q08378 1498 aa21.49■■□□□ 1.03
SHC1-205ENST00000368453 CLIP1P30622 1438 aa21.44■■□□□ 1.02
SHC1-205ENST00000368453 ERICH6Q7L0X2 663 aa21.41■■□□□ 1.02
SHC1-205ENST00000368453 DHX57Q6P158 1386 aaKnown RBP21.4■■□□□ 1.02
SHC1-205ENST00000368453 EEA1Q15075 1411 aa21.4■■□□□ 1.02
SHC1-205ENST00000368453 DDX10Q13206 875 aaKnown RBP21.38■■□□□ 1.01
SHC1-205ENST00000368453 BAZ1AQ9NRL2 1556 aaPredicted RBP21.38■■□□□ 1.01
SHC1-205ENST00000368453 TRIM52Q96A61 297 aa21.38■■□□□ 1.01
SHC1-205ENST00000368453 EIF4G1Q04637 1599 aaKnown RBP21.37■■□□□ 1.01
SHC1-205ENST00000368453 VPS8Q8N3P4 1428 aa21.31■■□□□ 1
SHC1-205ENST00000368453 MSH5O43196 834 aa21.26■□□□□ 0.99
SHC1-205ENST00000368453 HIRIP3Q9BW71 556 aaPredicted RBP21.25■□□□□ 0.99
SHC1-205ENST00000368453 CEP164Q9UPV0 1460 aa21.24■□□□□ 0.99
SHC1-205ENST00000368453 KANK4Q5T7N3 995 aaPredicted RBP21.2■□□□□ 0.98
SHC1-205ENST00000368453 IRX6P78412 446 aaPredicted RBP21.19■□□□□ 0.98
SHC1-205ENST00000368453 TOP2AP11388 1531 aaKnown RBP21.16■□□□□ 0.98
SHC1-205ENST00000368453 NACADO15069 1562 aa21.14■□□□□ 0.98
SHC1-205ENST00000368453 CDK11AQ9UQ88 783 aaPredicted RBP21.14■□□□□ 0.98
SHC1-205ENST00000368453 SMARCA2P51531 1590 aa21.14■□□□□ 0.97
SHC1-205ENST00000368453 ANP32CO43423 234 aa21.12■□□□□ 0.97
SHC1-205ENST00000368453 RAPGEF2Q9Y4G8 1499 aa21.1■□□□□ 0.97
SHC1-205ENST00000368453 SIN3AQ96ST3 1273 aa21.08■□□□□ 0.97
SHC1-205ENST00000368453 KIF21BO75037 1637 aa21.03■□□□□ 0.96
SHC1-205ENST00000368453 PRKCSHP14314 528 aaPredicted RBP21.03■□□□□ 0.96
SHC1-205ENST00000368453 DEKP35659 375 aaKnown RBP21.01■□□□□ 0.95
SHC1-205ENST00000368453 HNRNPUQ00839 825 aaKnown RBP eCLIP20.98■□□□□ 0.95
SHC1-205ENST00000368453 FANCIQ9NVI1 1328 aa20.98■□□□□ 0.95
SHC1-205ENST00000368453 NBR1Q14596 966 aa20.96■□□□□ 0.95
SHC1-205ENST00000368453 PPP1R15AO75807 674 aaPredicted RBP20.95■□□□□ 0.94
SHC1-205ENST00000368453 CCNB3Q8WWL7 1395 aa20.95■□□□□ 0.94
SHC1-205ENST00000368453 RAB3GAP2Q9H2M9 1393 aa20.95■□□□□ 0.94
SHC1-205ENST00000368453 CCER2I3L3R5 266 aa20.93■□□□□ 0.94
SHC1-205ENST00000368453 SMARCA4P51532 1647 aa20.92■□□□□ 0.94
SHC1-205ENST00000368453 FAM50AQ14320 339 aaKnown RBP20.91■□□□□ 0.94
SHC1-205ENST00000368453 BAZ1BQ9UIG0 1483 aaKnown RBP20.91■□□□□ 0.94
SHC1-205ENST00000368453 SYNJ1O43426 1573 aa20.89■□□□□ 0.93
SHC1-205ENST00000368453 WDR97A6NE52 1622 aa20.85■□□□□ 0.93
SHC1-205ENST00000368453 RRBP1Q9P2E9 1410 aaKnown RBP20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms