RNA–Protein interactions for RNA: ENST00000621568.4

SPPL2B-213, Transcript of signal peptide peptidase like 2B, humanhuman

TSL 5

Gene SPPL2B, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL2B-213ENST00000621568 NISCHQ9Y2I1 1504 aa42.97■■■■■ 4.47
SPPL2B-213ENST00000621568 CCDC180Q9P1Z9 1646 aa38.27■■■■□ 3.72
SPPL2B-213ENST00000621568 ABCC9O60706 1549 aa37.77■■■■□ 3.64
SPPL2B-213ENST00000621568 RB1CC1Q8TDY2 1594 aa36.17■■■■□ 3.38
SPPL2B-213ENST00000621568 DCAF8L2P0C7V8 631 aa36.12■■■■□ 3.37
SPPL2B-213ENST00000621568 NACADO15069 1562 aa36.07■■■■□ 3.37
SPPL2B-213ENST00000621568 MYO15BQ96JP2 1530 aa35.78■■■■□ 3.32
SPPL2B-213ENST00000621568 ZCCHC6Q5VYS8 1495 aaKnown RBP35.76■■■■□ 3.32
SPPL2B-213ENST00000621568 DCAF1Q9Y4B6 1507 aa35.51■■■■□ 3.27
SPPL2B-213ENST00000621568 UNC13AQ9UPW8 1703 aa35.37■■■■□ 3.25
SPPL2B-213ENST00000621568 PABPN1Q86U42 306 aaKnown RBP eCLIP35.25■■■■□ 3.23
SPPL2B-213ENST00000621568 BICRAQ9NZM4 1560 aa35.14■■■■□ 3.22
SPPL2B-213ENST00000621568 DNAJC5BQ9UF47 199 aa35.03■■■■□ 3.2
SPPL2B-213ENST00000621568 SCRIBQ14160 1630 aa34.88■■■■□ 3.17
SPPL2B-213ENST00000621568 SHROOM4Q9ULL8 1493 aa34.7■■■■□ 3.15
SPPL2B-213ENST00000621568 EIF4G1Q04637 1599 aaKnown RBP34.21■■■■□ 3.07
SPPL2B-213ENST00000621568 CC2D2AQ9P2K1 1620 aa34.15■■■■□ 3.06
SPPL2B-213ENST00000621568 CECR2Q9BXF3 1484 aa33.97■■■■□ 3.03
SPPL2B-213ENST00000621568 SMARCA4P51532 1647 aa33.35■■■□□ 2.93
SPPL2B-213ENST00000621568 NCAPD3P42695 1498 aa33.31■■■□□ 2.92
SPPL2B-213ENST00000621568 BAZ1AQ9NRL2 1556 aaPredicted RBP33.3■■■□□ 2.92
SPPL2B-213ENST00000621568 ATAD2BQ9ULI0 1458 aa33.28■■■□□ 2.92
SPPL2B-213ENST00000621568 SMARCA2P51531 1590 aa33.18■■■□□ 2.9
SPPL2B-213ENST00000621568 MROH2BQ7Z745 1585 aa33.11■■■□□ 2.89
SPPL2B-213ENST00000621568 HMGXB3Q12766 1538 aa33.09■■■□□ 2.89
SPPL2B-213ENST00000621568 PEG3Q9GZU2 1588 aa33.05■■■□□ 2.88
SPPL2B-213ENST00000621568 BAZ1BQ9UIG0 1483 aaKnown RBP32.95■■■□□ 2.87
SPPL2B-213ENST00000621568 RSF1Q96T23 1441 aaPredicted RBP32.8■■■□□ 2.84
SPPL2B-213ENST00000621568 WIZO95785 1651 aa32.73■■■□□ 2.83
SPPL2B-213ENST00000621568 NESP48681 1621 aa32.6■■■□□ 2.81
SPPL2B-213ENST00000621568 ERCC6Q03468 1493 aa32.54■■■□□ 2.8
SPPL2B-213ENST00000621568 LAMC3Q9Y6N6 1575 aa32.45■■■□□ 2.78
SPPL2B-213ENST00000621568 TOP2AP11388 1531 aaKnown RBP32.4■■■□□ 2.78
SPPL2B-213ENST00000621568 CUX2O14529 1486 aa32.34■■■□□ 2.77
SPPL2B-213ENST00000621568 CADPSQ9ULU8 1353 aa32.32■■■□□ 2.76
SPPL2B-213ENST00000621568 PDS5BQ9NTI5 1447 aa32.25■■■□□ 2.75
SPPL2B-213ENST00000621568 SUPT5HO00267 1087 aaKnown RBP32.21■■■□□ 2.75
SPPL2B-213ENST00000621568 KIF21AQ7Z4S6 1674 aa32.18■■■□□ 2.74
SPPL2B-213ENST00000621568 THOC2Q8NI27 1593 aaKnown RBP32.16■■■□□ 2.74
SPPL2B-213ENST00000621568 CCDC88BA6NC98 1476 aa32.08■■■□□ 2.73
SPPL2B-213ENST00000621568 CFTRP13569 1480 aa32.05■■■□□ 2.72
SPPL2B-213ENST00000621568 FANCD2Q9BXW9 1451 aa31.93■■■□□ 2.7
SPPL2B-213ENST00000621568 MRC2Q9UBG0 1479 aa31.93■■■□□ 2.7
SPPL2B-213ENST00000621568 DNAJC5Q9H3Z4 198 aa31.93■■■□□ 2.7
SPPL2B-213ENST00000621568 CEP164Q9UPV0 1460 aa31.9■■■□□ 2.7
SPPL2B-213ENST00000621568 WDR62O43379 1518 aa31.85■■■□□ 2.69
SPPL2B-213ENST00000621568 PRDM2Q13029 1718 aa31.75■■■□□ 2.67
SPPL2B-213ENST00000621568 URB2Q14146 1524 aaKnown RBP31.65■■■□□ 2.66
SPPL2B-213ENST00000621568 TOPBP1Q92547 1522 aa31.39■■■□□ 2.62
SPPL2B-213ENST00000621568 ABCC8Q09428 1581 aa31.35■■■□□ 2.61
SPPL2B-213ENST00000621568 DNMBPQ6XZF7 1577 aa31.31■■■□□ 2.6
SPPL2B-213ENST00000621568 IFT140Q96RY7 1462 aa31.27■■■□□ 2.6
SPPL2B-213ENST00000621568 ZNF608Q9ULD9 1512 aaPredicted RBP31.17■■■□□ 2.58
SPPL2B-213ENST00000621568 POLA1P09884 1462 aaPredicted RBP31.1■■■□□ 2.57
SPPL2B-213ENST00000621568 TARBP1Q13395 1621 aaKnown RBP31.08■■■□□ 2.57
SPPL2B-213ENST00000621568 CUX1P39880 1505 aa31.05■■■□□ 2.56
SPPL2B-213ENST00000621568 EIF4G3O43432 1585 aaKnown RBP31■■■□□ 2.55
SPPL2B-213ENST00000621568 RAD54L2Q9Y4B4 1467 aa30.98■■■□□ 2.55
SPPL2B-213ENST00000621568 FGD5Q6ZNL6 1462 aa30.97■■■□□ 2.55
SPPL2B-213ENST00000621568 SOGA1O94964 1423 aa30.97■■■□□ 2.55
SPPL2B-213ENST00000621568 OSCARQ8IYS5 282 aa30.96■■■□□ 2.55
SPPL2B-213ENST00000621568 AQRO60306 1485 aaKnown RBP eCLIP30.95■■■□□ 2.553e-7■■■■■ 43.1
SPPL2B-213ENST00000621568 WRNQ14191 1432 aaPredicted RBP eCLIP30.95■■■□□ 2.545e-6■■■□□ 14.6
SPPL2B-213ENST00000621568 TDRD9Q8NDG6 1382 aaKnown RBP30.84■■■□□ 2.53
SPPL2B-213ENST00000621568 WDR97A6NE52 1622 aa30.79■■■□□ 2.52
SPPL2B-213ENST00000621568 TOP2BQ02880 1626 aa30.79■■■□□ 2.52
SPPL2B-213ENST00000621568 SYNJ1O43426 1573 aa30.78■■■□□ 2.52
SPPL2B-213ENST00000621568 BIVM-ERCC5R4GMW8 1640 aa30.75■■■□□ 2.51
SPPL2B-213ENST00000621568 ABCA10Q8WWZ4 1543 aa30.68■■■□□ 2.5
SPPL2B-213ENST00000621568 CHD1O14646 1710 aa30.67■■■□□ 2.5
SPPL2B-213ENST00000621568 GRIN2BQ13224 1484 aa30.63■■■□□ 2.49
SPPL2B-213ENST00000621568 SNAPC4Q5SXM2 1469 aa30.63■■■□□ 2.49
SPPL2B-213ENST00000621568 FBLN2P98095 1184 aa30.6■■■□□ 2.49
SPPL2B-213ENST00000621568 GAPVD1Q14C86 1478 aa30.6■■■□□ 2.49
SPPL2B-213ENST00000621568 MAGI1Q96QZ7 1491 aaPredicted RBP30.58■■■□□ 2.49
SPPL2B-213ENST00000621568 ABCA5Q8WWZ7 1642 aa30.56■■■□□ 2.48
SPPL2B-213ENST00000621568 PBRM1Q86U86 1689 aa30.53■■■□□ 2.48
SPPL2B-213ENST00000621568 TRIM41Q8WV44 630 aa30.52■■■□□ 2.48
SPPL2B-213ENST00000621568 RIMBP3CA6NJZ7 1639 aa30.49■■■□□ 2.47
SPPL2B-213ENST00000621568 RIMBP3BA6NNM3 1639 aa30.49■■■□□ 2.47
SPPL2B-213ENST00000621568 RIMBP3Q9UFD9 1639 aa30.49■■■□□ 2.47
SPPL2B-213ENST00000621568 CHMP7Q8WUX9 453 aaPredicted RBP30.48■■■□□ 2.47
SPPL2B-213ENST00000621568 SYNJ2O15056 1496 aa30.47■■■□□ 2.47
SPPL2B-213ENST00000621568 ARHGEF11O15085 1522 aa30.45■■■□□ 2.47
SPPL2B-213ENST00000621568 CLASP1Q7Z460 1538 aa30.37■■■□□ 2.45
SPPL2B-213ENST00000621568 KIF27Q86VH2 1401 aa30.32■■■□□ 2.44
SPPL2B-213ENST00000621568 ADAMTS12P58397 1594 aa30.29■■■□□ 2.44
SPPL2B-213ENST00000621568 ERICH3Q5RHP9 1530 aa30.27■■■□□ 2.44
SPPL2B-213ENST00000621568 GRIN2AQ12879 1464 aa30.25■■■□□ 2.43
SPPL2B-213ENST00000621568 FHAD1B1AJZ9 1412 aa30.23■■■□□ 2.43
SPPL2B-213ENST00000621568 ARAP1Q96P48 1450 aa30.19■■■□□ 2.42
SPPL2B-213ENST00000621568 CYB5RLQ6IPT4 315 aa30.19■■■□□ 2.42
SPPL2B-213ENST00000621568 IGF1RP08069 1367 aa30.18■■■□□ 2.42
SPPL2B-213ENST00000621568 NUP160Q12769 1436 aa30.14■■■□□ 2.42
SPPL2B-213ENST00000621568 CEP170Q5SW79 1584 aa30.11■■■□□ 2.41
SPPL2B-213ENST00000621568 CHIC1Q5VXU3 224 aa30.05■■■□□ 2.4
SPPL2B-213ENST00000621568 RUSC2Q8N2Y8 1516 aa30.03■■■□□ 2.4
SPPL2B-213ENST00000621568 CARMIL1Q5VZK9 1371 aa30.03■■■□□ 2.4
SPPL2B-213ENST00000621568 CUL7Q14999 1698 aa29.99■■■□□ 2.39
SPPL2B-213ENST00000621568 SHROOM2Q13796 1616 aa29.95■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms