RNA–Protein interactions for RNA: ENST00000470977.5

SNHG12-205, Transcript of small nucleolar RNA host gene 12, humanhuman

TSL 1 (best)

Gene SNHG12, Length 1,098 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG12-205ENST00000470977 NISCHQ9Y2I1 1504 aa33.4■■■□□ 2.94
SNHG12-205ENST00000470977 ABCC9O60706 1549 aa31.12■■■□□ 2.57
SNHG12-205ENST00000470977 CCDC180Q9P1Z9 1646 aa30.21■■■□□ 2.43
SNHG12-205ENST00000470977 DNAJC5BQ9UF47 199 aa29.97■■■□□ 2.39
SNHG12-205ENST00000470977 RB1CC1Q8TDY2 1594 aa29.21■■■□□ 2.27
SNHG12-205ENST00000470977 PABPN1Q86U42 306 aaKnown RBP eCLIP28.91■■■□□ 2.22
SNHG12-205ENST00000470977 NACADO15069 1562 aa28.82■■■□□ 2.2
SNHG12-205ENST00000470977 DCAF8L2P0C7V8 631 aa28.65■■■□□ 2.18
SNHG12-205ENST00000470977 UNC13AQ9UPW8 1703 aa28.44■■■□□ 2.14
SNHG12-205ENST00000470977 BICRAQ9NZM4 1560 aa28.4■■■□□ 2.14
SNHG12-205ENST00000470977 MYO15BQ96JP2 1530 aa28.17■■■□□ 2.1
SNHG12-205ENST00000470977 CECR2Q9BXF3 1484 aa28.11■■■□□ 2.09
SNHG12-205ENST00000470977 DNAJC5Q9H3Z4 198 aa28.09■■■□□ 2.09
SNHG12-205ENST00000470977 CC2D2AQ9P2K1 1620 aa28.02■■■□□ 2.08
SNHG12-205ENST00000470977 SHROOM4Q9ULL8 1493 aa27.91■■■□□ 2.06
SNHG12-205ENST00000470977 EIF4G1Q04637 1599 aaKnown RBP27.77■■■□□ 2.04
SNHG12-205ENST00000470977 SCRIBQ14160 1630 aa27.54■■■□□ 2
SNHG12-205ENST00000470977 DCAF1Q9Y4B6 1507 aa27.51■■■□□ 2
SNHG12-205ENST00000470977 ZCCHC6Q5VYS8 1495 aaKnown RBP27.5■■□□□ 1.99
SNHG12-205ENST00000470977 CUX2O14529 1486 aa27.11■■□□□ 1.93
SNHG12-205ENST00000470977 ERCC6Q03468 1493 aa26.92■■□□□ 1.9
SNHG12-205ENST00000470977 NCAPD3P42695 1498 aa26.68■■□□□ 1.86
SNHG12-205ENST00000470977 TRIM41Q8WV44 630 aa26.54■■□□□ 1.84
SNHG12-205ENST00000470977 NESP48681 1621 aa26.5■■□□□ 1.83
SNHG12-205ENST00000470977 ATAD2BQ9ULI0 1458 aa26.48■■□□□ 1.83
SNHG12-205ENST00000470977 HMGXB3Q12766 1538 aa26.34■■□□□ 1.81
SNHG12-205ENST00000470977 SMARCA2P51531 1590 aa26.31■■□□□ 1.8
SNHG12-205ENST00000470977 THOC2Q8NI27 1593 aaKnown RBP26.31■■□□□ 1.8
SNHG12-205ENST00000470977 SMARCA4P51532 1647 aa26.18■■□□□ 1.78
SNHG12-205ENST00000470977 BAZ1BQ9UIG0 1483 aaKnown RBP26.16■■□□□ 1.78
SNHG12-205ENST00000470977 LAMC3Q9Y6N6 1575 aa26.13■■□□□ 1.77
SNHG12-205ENST00000470977 PDS5BQ9NTI5 1447 aa26.08■■□□□ 1.77
SNHG12-205ENST00000470977 KIF21AQ7Z4S6 1674 aa26.03■■□□□ 1.76
SNHG12-205ENST00000470977 BAZ1AQ9NRL2 1556 aaPredicted RBP25.95■■□□□ 1.75
SNHG12-205ENST00000470977 PEG3Q9GZU2 1588 aa25.93■■□□□ 1.74
SNHG12-205ENST00000470977 MRC2Q9UBG0 1479 aa25.87■■□□□ 1.73
SNHG12-205ENST00000470977 CADPSQ9ULU8 1353 aa25.84■■□□□ 1.73
SNHG12-205ENST00000470977 OSCARQ8IYS5 282 aa25.83■■□□□ 1.73
SNHG12-205ENST00000470977 WDR62O43379 1518 aa25.81■■□□□ 1.72
SNHG12-205ENST00000470977 MROH2BQ7Z745 1585 aa25.73■■□□□ 1.71
SNHG12-205ENST00000470977 CEP164Q9UPV0 1460 aa25.6■■□□□ 1.69
SNHG12-205ENST00000470977 FANCD2Q9BXW9 1451 aa25.53■■□□□ 1.68
SNHG12-205ENST00000470977 RIMBP3CA6NJZ7 1639 aa25.46■■□□□ 1.67
SNHG12-205ENST00000470977 RIMBP3BA6NNM3 1639 aa25.46■■□□□ 1.67
SNHG12-205ENST00000470977 RIMBP3Q9UFD9 1639 aa25.46■■□□□ 1.67
SNHG12-205ENST00000470977 URB2Q14146 1524 aaKnown RBP25.36■■□□□ 1.65
SNHG12-205ENST00000470977 CFTRP13569 1480 aa25.35■■□□□ 1.65
SNHG12-205ENST00000470977 ARHGEF11O15085 1522 aa25.34■■□□□ 1.65
SNHG12-205ENST00000470977 WIZO95785 1651 aa25.34■■□□□ 1.65
SNHG12-205ENST00000470977 CYB5RLQ6IPT4 315 aa25.29■■□□□ 1.64
SNHG12-205ENST00000470977 TRHP20396 242 aaPredicted RBP25.26■■□□□ 1.63
SNHG12-205ENST00000470977 ZNF608Q9ULD9 1512 aaPredicted RBP25.19■■□□□ 1.62
SNHG12-205ENST00000470977 IFT140Q96RY7 1462 aa25.13■■□□□ 1.61
SNHG12-205ENST00000470977 AEBP2Q6ZN18 517 aaPredicted RBP25.1■■□□□ 1.61
SNHG12-205ENST00000470977 ARAP1Q96P48 1450 aa25.04■■□□□ 1.6
SNHG12-205ENST00000470977 TOP2AP11388 1531 aaKnown RBP24.97■■□□□ 1.59
SNHG12-205ENST00000470977 RSF1Q96T23 1441 aaPredicted RBP24.95■■□□□ 1.59
SNHG12-205ENST00000470977 TOPBP1Q92547 1522 aa24.94■■□□□ 1.58
SNHG12-205ENST00000470977 EIF4G3O43432 1585 aaKnown RBP24.93■■□□□ 1.58
SNHG12-205ENST00000470977 FBLN2P98095 1184 aa24.92■■□□□ 1.58
SNHG12-205ENST00000470977 AQRO60306 1485 aaKnown RBP eCLIP24.89■■□□□ 1.573e-10■■■■■ 36.3
SNHG12-205ENST00000470977 CHD1O14646 1710 aa24.86■■□□□ 1.57
SNHG12-205ENST00000470977 PRDM2Q13029 1718 aa24.86■■□□□ 1.57
SNHG12-205ENST00000470977 ABCC8Q09428 1581 aa24.83■■□□□ 1.57
SNHG12-205ENST00000470977 CCDC88BA6NC98 1476 aa24.76■■□□□ 1.55
SNHG12-205ENST00000470977 DNMBPQ6XZF7 1577 aa24.74■■□□□ 1.55
SNHG12-205ENST00000470977 TARBP1Q13395 1621 aaKnown RBP24.74■■□□□ 1.55
SNHG12-205ENST00000470977 POLA1P09884 1462 aaPredicted RBP24.64■■□□□ 1.53
SNHG12-205ENST00000470977 CLASP1Q7Z460 1538 aa24.62■■□□□ 1.53
SNHG12-205ENST00000470977 TDRD9Q8NDG6 1382 aaKnown RBP24.62■■□□□ 1.53
SNHG12-205ENST00000470977 CHMP7Q8WUX9 453 aaPredicted RBP24.6■■□□□ 1.53
SNHG12-205ENST00000470977 RAD54L2Q9Y4B4 1467 aa24.58■■□□□ 1.53
SNHG12-205ENST00000470977 SNAPC4Q5SXM2 1469 aa24.57■■□□□ 1.52
SNHG12-205ENST00000470977 SOGA1O94964 1423 aa24.54■■□□□ 1.52
SNHG12-205ENST00000470977 SYNJ1O43426 1573 aa24.53■■□□□ 1.52
SNHG12-205ENST00000470977 GAPVD1Q14C86 1478 aa24.46■■□□□ 1.51
SNHG12-205ENST00000470977 MAGI1Q96QZ7 1491 aaPredicted RBP24.46■■□□□ 1.51
SNHG12-205ENST00000470977 SYNJ2O15056 1496 aa24.4■■□□□ 1.5
SNHG12-205ENST00000470977 WDR97A6NE52 1622 aa24.4■■□□□ 1.5
SNHG12-205ENST00000470977 GRIN2BQ13224 1484 aa24.39■■□□□ 1.5
SNHG12-205ENST00000470977 FGD5Q6ZNL6 1462 aa24.37■■□□□ 1.49
SNHG12-205ENST00000470977 CUX1P39880 1505 aa24.22■■□□□ 1.47
SNHG12-205ENST00000470977 ERCC6L2Q5T890 1561 aa24.2■■□□□ 1.47
SNHG12-205ENST00000470977 PBRM1Q86U86 1689 aa24.13■■□□□ 1.45
SNHG12-205ENST00000470977 ILDR1Q86SU0 546 aaPredicted RBP24.11■■□□□ 1.45
SNHG12-205ENST00000470977 CEP170Q5SW79 1584 aa24.08■■□□□ 1.44
SNHG12-205ENST00000470977 GRIN2AQ12879 1464 aa24.07■■□□□ 1.44
SNHG12-205ENST00000470977 ABCA10Q8WWZ4 1543 aa24.05■■□□□ 1.44
SNHG12-205ENST00000470977 KIF13AQ9H1H9 1805 aa24.04■■□□□ 1.44
SNHG12-205ENST00000470977 NUP160Q12769 1436 aa24.03■■□□□ 1.44
SNHG12-205ENST00000470977 ABCA5Q8WWZ7 1642 aa24.02■■□□□ 1.44
SNHG12-205ENST00000470977 KDM4FA0A1W2PPD8 638 aa24.02■■□□□ 1.44
SNHG12-205ENST00000470977 FAM69CQ0P6D2 419 aa23.99■■□□□ 1.43
SNHG12-205ENST00000470977 SHROOM2Q13796 1616 aa23.95■■□□□ 1.42
SNHG12-205ENST00000470977 ABCC10Q5T3U5 1492 aa23.92■■□□□ 1.42
SNHG12-205ENST00000470977 ADAMTS12P58397 1594 aa23.91■■□□□ 1.42
SNHG12-205ENST00000470977 PRG4Q92954 1404 aaPredicted RBP23.89■■□□□ 1.41
SNHG12-205ENST00000470977 FHAD1B1AJZ9 1412 aa23.88■■□□□ 1.41
SNHG12-205ENST00000470977 NPM1P06748 294 aaKnown RBP eCLIP23.86■■□□□ 1.41
SNHG12-205ENST00000470977 JPH4Q96JJ6 628 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms